Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 AC010857.1-201ENST00000606398 594 ntBASIC4.63□□□□□ -1.67
SMIM28A0A1B0GU29 OR7M1P-201ENST00000608946 533 ntBASIC4.63□□□□□ -1.67
SMIM28A0A1B0GU29 AC117490.2-201ENST00000610042 594 ntBASIC4.63□□□□□ -1.67
SMIM28A0A1B0GU29 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC4.63□□□□□ -1.67
SMIM28A0A1B0GU29 AC140113.4-201ENST00000622087 222 ntBASIC4.63□□□□□ -1.67
SMIM28A0A1B0GU29 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.63□□□□□ -1.67
SMIM28A0A1B0GU29 MTND5P23-201ENST00000430812 1655 ntBASIC4.63□□□□□ -1.67
SMIM28A0A1B0GU29 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
SMIM28A0A1B0GU29 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SMIM28A0A1B0GU29 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SMIM28A0A1B0GU29 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SMIM28A0A1B0GU29 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.62□□□□□ -1.67
SMIM28A0A1B0GU29 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.62□□□□□ -1.67
SMIM28A0A1B0GU29 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.62□□□□□ -1.67
SMIM28A0A1B0GU29 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SMIM28A0A1B0GU29 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.62□□□□□ -1.67
SMIM28A0A1B0GU29 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
SMIM28A0A1B0GU29 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
SMIM28A0A1B0GU29 SNORA79B-201ENST00000410557 148 ntBASIC4.62□□□□□ -1.67
SMIM28A0A1B0GU29 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.62□□□□□ -1.67
SMIM28A0A1B0GU29 AC096644.3-201ENST00000416788 338 ntBASIC4.62□□□□□ -1.67
SMIM28A0A1B0GU29 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
SMIM28A0A1B0GU29 AC244453.4-201ENST00000419150 388 ntBASIC4.62□□□□□ -1.67
SMIM28A0A1B0GU29 UBE2V2P3-201ENST00000433562 437 ntBASIC4.62□□□□□ -1.67
SMIM28A0A1B0GU29 CEACAMP1-201ENST00000434624 1035 ntBASIC4.62□□□□□ -1.67
SMIM28A0A1B0GU29 SNRPFP2-201ENST00000440710 251 ntBASIC4.62□□□□□ -1.67
SMIM28A0A1B0GU29 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC4.62□□□□□ -1.67
SMIM28A0A1B0GU29 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.62□□□□□ -1.67
SMIM28A0A1B0GU29 RNU6-775P-201ENST00000459318 96 ntBASIC4.62□□□□□ -1.67
SMIM28A0A1B0GU29 CREM-220ENST00000463314 964 ntTSL 2 BASIC4.62□□□□□ -1.67
SMIM28A0A1B0GU29 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.62□□□□□ -1.67
SMIM28A0A1B0GU29 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.62□□□□□ -1.67
SMIM28A0A1B0GU29 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC4.62□□□□□ -1.67
SMIM28A0A1B0GU29 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC4.62□□□□□ -1.67
SMIM28A0A1B0GU29 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC4.62□□□□□ -1.67
SMIM28A0A1B0GU29 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.62□□□□□ -1.67
SMIM28A0A1B0GU29 RN7SL600P-201ENST00000581811 299 ntBASIC4.62□□□□□ -1.67
SMIM28A0A1B0GU29 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.62□□□□□ -1.67
SMIM28A0A1B0GU29 AL353726.1-201ENST00000614041 1000 ntBASIC4.62□□□□□ -1.67
SMIM28A0A1B0GU29 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.62□□□□□ -1.67
SMIM28A0A1B0GU29 AC008013.2-202ENST00000637965 364 ntBASIC4.62□□□□□ -1.67
SMIM28A0A1B0GU29 MIR492-201ENST00000638676 116 ntBASIC4.62□□□□□ -1.67
SMIM28A0A1B0GU29 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SMIM28A0A1B0GU29 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.62□□□□□ -1.67
SMIM28A0A1B0GU29 MAPK10-320ENST00000641462 6696 ntBASIC4.62□□□□□ -1.67
SMIM28A0A1B0GU29 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SMIM28A0A1B0GU29 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.61□□□□□ -1.67
SMIM28A0A1B0GU29 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
SMIM28A0A1B0GU29 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SMIM28A0A1B0GU29 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.61□□□□□ -1.67
SMIM28A0A1B0GU29 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
SMIM28A0A1B0GU29 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
SMIM28A0A1B0GU29 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
SMIM28A0A1B0GU29 RNU1-20P-201ENST00000363314 162 ntBASIC4.61□□□□□ -1.67
SMIM28A0A1B0GU29 RNA5SP515-201ENST00000364570 118 ntBASIC4.61□□□□□ -1.67
SMIM28A0A1B0GU29 RNA5SP479-201ENST00000364858 117 ntBASIC4.61□□□□□ -1.67
SMIM28A0A1B0GU29 SNORD66.1-201ENST00000391230 76 ntBASIC4.61□□□□□ -1.67
SMIM28A0A1B0GU29 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.61□□□□□ -1.67
SMIM28A0A1B0GU29 VN1R31P-201ENST00000417498 730 ntBASIC4.61□□□□□ -1.67
SMIM28A0A1B0GU29 AL358176.3-201ENST00000420757 454 ntBASIC4.61□□□□□ -1.67
SMIM28A0A1B0GU29 COX6CP15-201ENST00000426313 211 ntBASIC4.61□□□□□ -1.67
SMIM28A0A1B0GU29 COX6B1P7-201ENST00000430845 235 ntBASIC4.61□□□□□ -1.67
SMIM28A0A1B0GU29 RPL34P6-201ENST00000432390 345 ntBASIC4.61□□□□□ -1.67
SMIM28A0A1B0GU29 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC4.61□□□□□ -1.67
SMIM28A0A1B0GU29 EEF1A1P1-201ENST00000447052 739 ntBASIC4.61□□□□□ -1.67
SMIM28A0A1B0GU29 RPS27AP15-201ENST00000447672 466 ntBASIC4.61□□□□□ -1.67
SMIM28A0A1B0GU29 AC114755.5-201ENST00000447760 831 ntBASIC4.61□□□□□ -1.67
SMIM28A0A1B0GU29 AC239798.3-201ENST00000454459 408 ntBASIC4.61□□□□□ -1.67
SMIM28A0A1B0GU29 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.61□□□□□ -1.67
SMIM28A0A1B0GU29 FTH1P2-201ENST00000466086 412 ntBASIC4.61□□□□□ -1.67
SMIM28A0A1B0GU29 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.61□□□□□ -1.67
SMIM28A0A1B0GU29 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.61□□□□□ -1.67
SMIM28A0A1B0GU29 RPS27AP13-201ENST00000498403 237 ntBASIC4.61□□□□□ -1.67
SMIM28A0A1B0GU29 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.61□□□□□ -1.67
SMIM28A0A1B0GU29 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.61□□□□□ -1.67
SMIM28A0A1B0GU29 AC099522.1-202ENST00000514718 367 ntBASIC4.61□□□□□ -1.67
SMIM28A0A1B0GU29 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC4.61□□□□□ -1.67
SMIM28A0A1B0GU29 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.61□□□□□ -1.67
SMIM28A0A1B0GU29 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.61□□□□□ -1.67
SMIM28A0A1B0GU29 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.61□□□□□ -1.67
SMIM28A0A1B0GU29 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC4.61□□□□□ -1.67
SMIM28A0A1B0GU29 MTATP6P25-201ENST00000574491 261 ntBASIC4.61□□□□□ -1.67
SMIM28A0A1B0GU29 MIR3160-1-201ENST00000577972 85 ntBASIC4.61□□□□□ -1.67
SMIM28A0A1B0GU29 AC006116.5-201ENST00000591936 559 ntBASIC4.61□□□□□ -1.67
SMIM28A0A1B0GU29 AC079791.1-201ENST00000605356 973 ntBASIC4.61□□□□□ -1.67
SMIM28A0A1B0GU29 AL591034.3-201ENST00000605511 685 ntBASIC4.61□□□□□ -1.67
SMIM28A0A1B0GU29 LGI1-209ENST00000627699 664 ntTSL 3 BASIC4.61□□□□□ -1.67
SMIM28A0A1B0GU29 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SMIM28A0A1B0GU29 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
SMIM28A0A1B0GU29 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.61□□□□□ -1.67
SMIM28A0A1B0GU29 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SMIM28A0A1B0GU29 AL133243.3-201ENST00000617415 3004 ntBASIC4.61□□□□□ -1.67
SMIM28A0A1B0GU29 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
SMIM28A0A1B0GU29 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC4.61□□□□□ -1.67
SMIM28A0A1B0GU29 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.61□□□□□ -1.67
SMIM28A0A1B0GU29 AC139713.2-215ENST00000641428 5037 ntBASIC4.61□□□□□ -1.67
SMIM28A0A1B0GU29 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
SMIM28A0A1B0GU29 AC126323.6-202ENST00000568092 3511 ntBASIC4.6□□□□□ -1.67
SMIM28A0A1B0GU29 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SMIM28A0A1B0GU29 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms