Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
LINC01558Q9Y6Z2 MIR600-201ENST00000385007 98 ntBASIC2.16□□□□□ -2.06
LINC01558Q9Y6Z2 AL133270.1-201ENST00000402635 279 ntBASIC2.16□□□□□ -2.06
LINC01558Q9Y6Z2 HMGB1P13-201ENST00000406019 642 ntBASIC2.16□□□□□ -2.06
LINC01558Q9Y6Z2 RN7SKP205-201ENST00000410999 307 ntBASIC2.16□□□□□ -2.06
LINC01558Q9Y6Z2 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC2.16□□□□□ -2.06
LINC01558Q9Y6Z2 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC2.16□□□□□ -2.06
LINC01558Q9Y6Z2 AL672212.1-201ENST00000422246 400 ntBASIC2.16□□□□□ -2.06
LINC01558Q9Y6Z2 IYD-207ENST00000425615 684 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
LINC01558Q9Y6Z2 RPL26P34-201ENST00000431005 451 ntBASIC2.16□□□□□ -2.06
LINC01558Q9Y6Z2 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC2.16□□□□□ -2.06
LINC01558Q9Y6Z2 RPEP2-201ENST00000432149 701 ntBASIC2.16□□□□□ -2.06
LINC01558Q9Y6Z2 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC2.16□□□□□ -2.06
LINC01558Q9Y6Z2 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC2.16□□□□□ -2.06
LINC01558Q9Y6Z2 KCTD9P3-201ENST00000434597 1169 ntBASIC2.16□□□□□ -2.06
LINC01558Q9Y6Z2 RPE-210ENST00000438204 796 ntTSL 2 BASIC2.16□□□□□ -2.06
LINC01558Q9Y6Z2 CYCSP43-201ENST00000438233 310 ntBASIC2.16□□□□□ -2.06
LINC01558Q9Y6Z2 GNA14-AS1-201ENST00000439145 605 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
LINC01558Q9Y6Z2 AC007064.2-201ENST00000442403 500 ntTSL 5 BASIC2.16□□□□□ -2.06
LINC01558Q9Y6Z2 AL512326.1-201ENST00000443050 721 ntBASIC2.16□□□□□ -2.06
LINC01558Q9Y6Z2 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC2.16□□□□□ -2.06
LINC01558Q9Y6Z2 H2AFZP5-201ENST00000446960 382 ntBASIC2.16□□□□□ -2.06
LINC01558Q9Y6Z2 EIF2S2P2-201ENST00000447161 982 ntBASIC2.16□□□□□ -2.06
LINC01558Q9Y6Z2 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC2.16□□□□□ -2.06
LINC01558Q9Y6Z2 AC003035.2-201ENST00000448948 696 ntTSL 3 BASIC2.16□□□□□ -2.06
LINC01558Q9Y6Z2 AL157896.1-201ENST00000451617 790 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
LINC01558Q9Y6Z2 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC2.16□□□□□ -2.06
LINC01558Q9Y6Z2 RN7SL442P-201ENST00000473804 320 ntBASIC2.16□□□□□ -2.06
LINC01558Q9Y6Z2 AL158068.1-201ENST00000506116 616 ntBASIC2.16□□□□□ -2.06
LINC01558Q9Y6Z2 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC2.16□□□□□ -2.06
LINC01558Q9Y6Z2 RNU1-6P-201ENST00000516290 144 ntBASIC2.16□□□□□ -2.06
LINC01558Q9Y6Z2 TPT1-AS1-213ENST00000521336 759 ntTSL 5 BASIC2.16□□□□□ -2.06
LINC01558Q9Y6Z2 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC2.16□□□□□ -2.06
LINC01558Q9Y6Z2 AP001636.2-201ENST00000525517 696 ntBASIC2.16□□□□□ -2.06
LINC01558Q9Y6Z2 AC103855.4-201ENST00000533158 265 ntBASIC2.16□□□□□ -2.06
LINC01558Q9Y6Z2 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
LINC01558Q9Y6Z2 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC2.16□□□□□ -2.06
LINC01558Q9Y6Z2 AC008014.1-201ENST00000551503 829 ntTSL 3 BASIC2.16□□□□□ -2.06
LINC01558Q9Y6Z2 OR4H12P-201ENST00000556269 907 ntBASIC2.16□□□□□ -2.06
LINC01558Q9Y6Z2 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC2.16□□□□□ -2.06
LINC01558Q9Y6Z2 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC2.16□□□□□ -2.06
LINC01558Q9Y6Z2 AC022898.1-202ENST00000560864 806 ntTSL 2 BASIC2.16□□□□□ -2.06
LINC01558Q9Y6Z2 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
LINC01558Q9Y6Z2 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC2.16□□□□□ -2.06
LINC01558Q9Y6Z2 RBM22P1-201ENST00000578589 1214 ntBASIC2.16□□□□□ -2.06
LINC01558Q9Y6Z2 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC2.16□□□□□ -2.06
LINC01558Q9Y6Z2 AP006587.6-201ENST00000582128 1091 ntBASIC2.16□□□□□ -2.06
LINC01558Q9Y6Z2 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC2.16□□□□□ -2.06
LINC01558Q9Y6Z2 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC2.16□□□□□ -2.06
LINC01558Q9Y6Z2 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC2.16□□□□□ -2.06
LINC01558Q9Y6Z2 AC020910.3-201ENST00000603701 874 ntBASIC2.16□□□□□ -2.06
LINC01558Q9Y6Z2 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC2.16□□□□□ -2.06
LINC01558Q9Y6Z2 AC099343.2-201ENST00000605082 686 ntBASIC2.16□□□□□ -2.06
LINC01558Q9Y6Z2 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC2.16□□□□□ -2.06
LINC01558Q9Y6Z2 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC2.16□□□□□ -2.06
LINC01558Q9Y6Z2 ST7-AS1_2.1-201ENST00000615247 111 ntBASIC2.16□□□□□ -2.06
LINC01558Q9Y6Z2 AC099669.2-201ENST00000616549 437 ntBASIC2.16□□□□□ -2.06
LINC01558Q9Y6Z2 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
LINC01558Q9Y6Z2 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC2.16□□□□□ -2.06
LINC01558Q9Y6Z2 AC048347.1-201ENST00000624621 427 ntBASIC2.16□□□□□ -2.06
LINC01558Q9Y6Z2 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC2.16□□□□□ -2.06
LINC01558Q9Y6Z2 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC2.16□□□□□ -2.06
LINC01558Q9Y6Z2 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC2.16□□□□□ -2.06
LINC01558Q9Y6Z2 OR6C71P-202ENST00000641886 1107 ntBASIC2.16□□□□□ -2.06
LINC01558Q9Y6Z2 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
LINC01558Q9Y6Z2 AC025125.1-201ENST00000624743 1922 ntBASIC2.16□□□□□ -2.06
LINC01558Q9Y6Z2 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
LINC01558Q9Y6Z2 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
LINC01558Q9Y6Z2 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC2.16□□□□□ -2.06
LINC01558Q9Y6Z2 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC2.16□□□□□ -2.06
LINC01558Q9Y6Z2 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
LINC01558Q9Y6Z2 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
LINC01558Q9Y6Z2 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC2.16□□□□□ -2.06
LINC01558Q9Y6Z2 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
LINC01558Q9Y6Z2 DCAF13P3-201ENST00000561147 1334 ntBASIC2.16□□□□□ -2.06
LINC01558Q9Y6Z2 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC2.15□□□□□ -2.06
LINC01558Q9Y6Z2 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC2.15□□□□□ -2.06
LINC01558Q9Y6Z2 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC2.15□□□□□ -2.06
LINC01558Q9Y6Z2 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC2.15□□□□□ -2.06
LINC01558Q9Y6Z2 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC2.15□□□□□ -2.06
LINC01558Q9Y6Z2 AL513302.2-201ENST00000562313 1842 ntBASIC2.15□□□□□ -2.06
LINC01558Q9Y6Z2 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
LINC01558Q9Y6Z2 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
LINC01558Q9Y6Z2 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
LINC01558Q9Y6Z2 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
LINC01558Q9Y6Z2 OCM2-201ENST00000257627 696 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
LINC01558Q9Y6Z2 RNU4-8P-201ENST00000364936 141 ntBASIC2.15□□□□□ -2.07
LINC01558Q9Y6Z2 DYNLT3P1-201ENST00000378574 347 ntBASIC2.15□□□□□ -2.07
LINC01558Q9Y6Z2 MIR92A2-201ENST00000385299 75 ntBASIC2.15□□□□□ -2.07
LINC01558Q9Y6Z2 SNORA35-201ENST00000386104 128 ntBASIC2.15□□□□□ -2.07
LINC01558Q9Y6Z2 RNU1-77P-201ENST00000390868 162 ntBASIC2.15□□□□□ -2.07
LINC01558Q9Y6Z2 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
LINC01558Q9Y6Z2 PSMA6P1-201ENST00000400275 741 ntBASIC2.15□□□□□ -2.07
LINC01558Q9Y6Z2 HSPE1P26-201ENST00000405341 275 ntBASIC2.15□□□□□ -2.07
LINC01558Q9Y6Z2 RPL31P52-201ENST00000407532 367 ntBASIC2.15□□□□□ -2.07
LINC01558Q9Y6Z2 SNORA11D-201ENST00000408548 128 ntBASIC2.15□□□□□ -2.07
LINC01558Q9Y6Z2 SNORA11E-201ENST00000408778 128 ntBASIC2.15□□□□□ -2.07
LINC01558Q9Y6Z2 RN7SKP270-201ENST00000411297 312 ntBASIC2.15□□□□□ -2.07
LINC01558Q9Y6Z2 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
LINC01558Q9Y6Z2 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms