Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 SNORA70F-201ENST00000384142 135 ntBASIC4.78□□□□□ -1.64
PCDHGA1Q9Y5H4 MIR92A2-201ENST00000385299 75 ntBASIC4.78□□□□□ -1.64
PCDHGA1Q9Y5H4 SNORA48.4-201ENST00000391089 134 ntBASIC4.78□□□□□ -1.64
PCDHGA1Q9Y5H4 HMGB1P10-201ENST00000395823 563 ntBASIC4.78□□□□□ -1.64
PCDHGA1Q9Y5H4 AL590290.1-201ENST00000405336 380 ntBASIC4.78□□□□□ -1.64
PCDHGA1Q9Y5H4 CENPIP1-201ENST00000425713 902 ntBASIC4.78□□□□□ -1.64
PCDHGA1Q9Y5H4 RPL12P28-201ENST00000430852 489 ntBASIC4.78□□□□□ -1.64
PCDHGA1Q9Y5H4 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4.78□□□□□ -1.64
PCDHGA1Q9Y5H4 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.78□□□□□ -1.64
PCDHGA1Q9Y5H4 AL031663.1-201ENST00000437445 219 ntBASIC4.78□□□□□ -1.64
PCDHGA1Q9Y5H4 YWHAZP2-201ENST00000440317 728 ntBASIC4.78□□□□□ -1.64
PCDHGA1Q9Y5H4 TCEA1P3-201ENST00000443005 880 ntBASIC4.78□□□□□ -1.64
PCDHGA1Q9Y5H4 AC092685.1-201ENST00000447960 1243 ntBASIC4.78□□□□□ -1.64
PCDHGA1Q9Y5H4 TPMTP4-201ENST00000450749 678 ntBASIC4.78□□□□□ -1.64
PCDHGA1Q9Y5H4 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC4.78□□□□□ -1.64
PCDHGA1Q9Y5H4 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.78□□□□□ -1.64
PCDHGA1Q9Y5H4 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC4.78□□□□□ -1.64
PCDHGA1Q9Y5H4 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC4.78□□□□□ -1.64
PCDHGA1Q9Y5H4 MTND2P7-201ENST00000521337 640 ntBASIC4.78□□□□□ -1.64
PCDHGA1Q9Y5H4 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.78□□□□□ -1.64
PCDHGA1Q9Y5H4 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC4.78□□□□□ -1.64
PCDHGA1Q9Y5H4 AL110118.1-201ENST00000553543 400 ntBASIC4.78□□□□□ -1.64
PCDHGA1Q9Y5H4 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.78□□□□□ -1.64
PCDHGA1Q9Y5H4 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.78□□□□□ -1.64
PCDHGA1Q9Y5H4 BNIP3P5-201ENST00000562290 498 ntBASIC4.78□□□□□ -1.64
PCDHGA1Q9Y5H4 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC4.78□□□□□ -1.64
PCDHGA1Q9Y5H4 MYLK-221ENST00000583087 678 ntTSL 4 BASIC4.78□□□□□ -1.64
PCDHGA1Q9Y5H4 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC4.78□□□□□ -1.64
PCDHGA1Q9Y5H4 AL020997.2-201ENST00000602607 184 ntBASIC4.78□□□□□ -1.64
PCDHGA1Q9Y5H4 IGKV1OR2-9-201ENST00000603957 287 ntBASIC4.78□□□□□ -1.64
PCDHGA1Q9Y5H4 IGKV1OR2-11-201ENST00000604120 287 ntBASIC4.78□□□□□ -1.64
PCDHGA1Q9Y5H4 AL356218.2-201ENST00000605264 187 ntBASIC4.78□□□□□ -1.64
PCDHGA1Q9Y5H4 AC243654.2-201ENST00000612843 443 ntBASIC4.78□□□□□ -1.64
PCDHGA1Q9Y5H4 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
PCDHGA1Q9Y5H4 AC123768.4-201ENST00000616244 701 ntBASIC4.78□□□□□ -1.64
PCDHGA1Q9Y5H4 MIR6853-201ENST00000619642 74 ntBASIC4.78□□□□□ -1.64
PCDHGA1Q9Y5H4 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC4.78□□□□□ -1.64
PCDHGA1Q9Y5H4 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
PCDHGA1Q9Y5H4 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC4.78□□□□□ -1.64
PCDHGA1Q9Y5H4 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
PCDHGA1Q9Y5H4 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
PCDHGA1Q9Y5H4 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.65
PCDHGA1Q9Y5H4 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.78□□□□□ -1.65
PCDHGA1Q9Y5H4 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC4.77□□□□□ -1.65
PCDHGA1Q9Y5H4 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
PCDHGA1Q9Y5H4 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
PCDHGA1Q9Y5H4 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
PCDHGA1Q9Y5H4 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
PCDHGA1Q9Y5H4 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
PCDHGA1Q9Y5H4 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
PCDHGA1Q9Y5H4 RNU6-317P-201ENST00000384031 107 ntBASIC4.77□□□□□ -1.65
PCDHGA1Q9Y5H4 TAF9BP2-201ENST00000400856 499 ntBASIC4.77□□□□□ -1.65
PCDHGA1Q9Y5H4 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC4.77□□□□□ -1.65
PCDHGA1Q9Y5H4 AC016831.4-201ENST00000438302 307 ntBASIC4.77□□□□□ -1.65
PCDHGA1Q9Y5H4 GEMIN8P3-201ENST00000445417 720 ntBASIC4.77□□□□□ -1.65
PCDHGA1Q9Y5H4 AC004980.3-201ENST00000447046 365 ntBASIC4.77□□□□□ -1.65
PCDHGA1Q9Y5H4 EIF2S2P2-201ENST00000447161 982 ntBASIC4.77□□□□□ -1.65
PCDHGA1Q9Y5H4 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.77□□□□□ -1.65
PCDHGA1Q9Y5H4 AC025459.1-201ENST00000504072 156 ntBASIC4.77□□□□□ -1.65
PCDHGA1Q9Y5H4 AC021193.1-201ENST00000511607 420 ntBASIC4.77□□□□□ -1.65
PCDHGA1Q9Y5H4 AC098976.1-201ENST00000513014 541 ntBASIC4.77□□□□□ -1.65
PCDHGA1Q9Y5H4 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC4.77□□□□□ -1.65
PCDHGA1Q9Y5H4 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC4.77□□□□□ -1.65
PCDHGA1Q9Y5H4 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.77□□□□□ -1.65
PCDHGA1Q9Y5H4 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC4.77□□□□□ -1.65
PCDHGA1Q9Y5H4 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.77□□□□□ -1.65
PCDHGA1Q9Y5H4 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.77□□□□□ -1.65
PCDHGA1Q9Y5H4 MIR4277-201ENST00000578298 84 ntBASIC4.77□□□□□ -1.65
PCDHGA1Q9Y5H4 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.77□□□□□ -1.65
PCDHGA1Q9Y5H4 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC4.77□□□□□ -1.65
PCDHGA1Q9Y5H4 AL590392.1-201ENST00000604960 446 ntBASIC4.77□□□□□ -1.65
PCDHGA1Q9Y5H4 AL445423.1-201ENST00000609941 536 ntBASIC4.77□□□□□ -1.65
PCDHGA1Q9Y5H4 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC4.77□□□□□ -1.65
PCDHGA1Q9Y5H4 AC025016.1-201ENST00000616746 682 ntBASIC4.77□□□□□ -1.65
PCDHGA1Q9Y5H4 AC009318.3-201ENST00000616916 503 ntBASIC4.77□□□□□ -1.65
PCDHGA1Q9Y5H4 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
PCDHGA1Q9Y5H4 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.77□□□□□ -1.65
PCDHGA1Q9Y5H4 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.77□□□□□ -1.65
PCDHGA1Q9Y5H4 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
PCDHGA1Q9Y5H4 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
PCDHGA1Q9Y5H4 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
PCDHGA1Q9Y5H4 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
PCDHGA1Q9Y5H4 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
PCDHGA1Q9Y5H4 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
PCDHGA1Q9Y5H4 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
PCDHGA1Q9Y5H4 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
PCDHGA1Q9Y5H4 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
PCDHGA1Q9Y5H4 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
PCDHGA1Q9Y5H4 MTND4P31-201ENST00000425607 1343 ntBASIC4.76□□□□□ -1.65
PCDHGA1Q9Y5H4 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC4.76□□□□□ -1.65
PCDHGA1Q9Y5H4 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
PCDHGA1Q9Y5H4 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
PCDHGA1Q9Y5H4 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
PCDHGA1Q9Y5H4 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
PCDHGA1Q9Y5H4 MIR129-1-201ENST00000384972 72 ntBASIC4.76□□□□□ -1.65
PCDHGA1Q9Y5H4 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
PCDHGA1Q9Y5H4 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
PCDHGA1Q9Y5H4 ELOCP19-201ENST00000411919 318 ntBASIC4.76□□□□□ -1.65
PCDHGA1Q9Y5H4 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC4.76□□□□□ -1.65
PCDHGA1Q9Y5H4 CYP1D1P-201ENST00000416662 1433 ntBASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms