Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 RNU6-697P-201ENST00000363348 107 ntBASIC4.13□□□□□ -1.75
TRAPPC4Q9Y296 SNORD113.2-201ENST00000364166 89 ntBASIC4.13□□□□□ -1.75
TRAPPC4Q9Y296 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
TRAPPC4Q9Y296 OR1F12-201ENST00000402365 945 ntBASIC4.13□□□□□ -1.75
TRAPPC4Q9Y296 AL049697.2-201ENST00000403708 294 ntBASIC4.13□□□□□ -1.75
TRAPPC4Q9Y296 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC4.13□□□□□ -1.75
TRAPPC4Q9Y296 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
TRAPPC4Q9Y296 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
TRAPPC4Q9Y296 MTND6P18-201ENST00000439477 513 ntBASIC4.13□□□□□ -1.75
TRAPPC4Q9Y296 AL935212.3-201ENST00000450729 284 ntBASIC4.13□□□□□ -1.75
TRAPPC4Q9Y296 OR52A4P-203ENST00000498233 1014 ntBASIC4.13□□□□□ -1.75
TRAPPC4Q9Y296 MTND4LP2-201ENST00000502312 285 ntBASIC4.13□□□□□ -1.75
TRAPPC4Q9Y296 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.13□□□□□ -1.75
TRAPPC4Q9Y296 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC4.13□□□□□ -1.75
TRAPPC4Q9Y296 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC4.13□□□□□ -1.75
TRAPPC4Q9Y296 OR5M2P-201ENST00000529003 936 ntBASIC4.13□□□□□ -1.75
TRAPPC4Q9Y296 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC4.13□□□□□ -1.75
TRAPPC4Q9Y296 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC4.13□□□□□ -1.75
TRAPPC4Q9Y296 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
TRAPPC4Q9Y296 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.13□□□□□ -1.75
TRAPPC4Q9Y296 AC023762.1-201ENST00000603280 584 ntBASIC4.13□□□□□ -1.75
TRAPPC4Q9Y296 AL031666.3-201ENST00000609320 1006 ntBASIC4.13□□□□□ -1.75
TRAPPC4Q9Y296 Mico1.1-201ENST00000611698 204 ntBASIC4.13□□□□□ -1.75
TRAPPC4Q9Y296 AC100827.5-201ENST00000615883 426 ntBASIC4.13□□□□□ -1.75
TRAPPC4Q9Y296 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
TRAPPC4Q9Y296 AP002967.1-201ENST00000624203 539 ntBASIC4.13□□□□□ -1.75
TRAPPC4Q9Y296 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC4.13□□□□□ -1.75
TRAPPC4Q9Y296 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.13□□□□□ -1.75
TRAPPC4Q9Y296 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
TRAPPC4Q9Y296 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
TRAPPC4Q9Y296 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.13□□□□□ -1.75
TRAPPC4Q9Y296 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
TRAPPC4Q9Y296 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
TRAPPC4Q9Y296 AL391684.1-202ENST00000641293 1636 ntBASIC4.13□□□□□ -1.75
TRAPPC4Q9Y296 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.13□□□□□ -1.75
TRAPPC4Q9Y296 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.13□□□□□ -1.75
TRAPPC4Q9Y296 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
TRAPPC4Q9Y296 MFSD8-242ENST00000641690 4199 ntBASIC4.13□□□□□ -1.75
TRAPPC4Q9Y296 AC107027.3-201ENST00000565095 3473 ntBASIC4.12□□□□□ -1.75
TRAPPC4Q9Y296 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
TRAPPC4Q9Y296 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.12□□□□□ -1.75
TRAPPC4Q9Y296 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
TRAPPC4Q9Y296 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
TRAPPC4Q9Y296 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
TRAPPC4Q9Y296 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
TRAPPC4Q9Y296 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.12□□□□□ -1.75
TRAPPC4Q9Y296 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.12□□□□□ -1.75
TRAPPC4Q9Y296 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC4.12□□□□□ -1.75
TRAPPC4Q9Y296 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC4.12□□□□□ -1.75
TRAPPC4Q9Y296 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
TRAPPC4Q9Y296 OR4K15-201ENST00000305051 1216 ntBASIC4.12□□□□□ -1.75
TRAPPC4Q9Y296 AC079741.1-201ENST00000321498 212 ntBASIC4.12□□□□□ -1.75
TRAPPC4Q9Y296 RNA5SP151-201ENST00000365632 117 ntBASIC4.12□□□□□ -1.75
TRAPPC4Q9Y296 SNORA70F-201ENST00000384142 135 ntBASIC4.12□□□□□ -1.75
TRAPPC4Q9Y296 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.12□□□□□ -1.75
TRAPPC4Q9Y296 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
TRAPPC4Q9Y296 RN7SKP106-201ENST00000410832 272 ntBASIC4.12□□□□□ -1.75
TRAPPC4Q9Y296 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
TRAPPC4Q9Y296 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC4.12□□□□□ -1.75
TRAPPC4Q9Y296 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC4.12□□□□□ -1.75
TRAPPC4Q9Y296 ELOCP18-201ENST00000434209 337 ntBASIC4.12□□□□□ -1.75
TRAPPC4Q9Y296 HMGB3P10-201ENST00000434734 572 ntBASIC4.12□□□□□ -1.75
TRAPPC4Q9Y296 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC4.12□□□□□ -1.75
TRAPPC4Q9Y296 ELOCP8-201ENST00000439309 332 ntBASIC4.12□□□□□ -1.75
TRAPPC4Q9Y296 YWHAZP2-201ENST00000440317 728 ntBASIC4.12□□□□□ -1.75
TRAPPC4Q9Y296 ELOCP15-201ENST00000442090 332 ntBASIC4.12□□□□□ -1.75
TRAPPC4Q9Y296 PTMAP3-201ENST00000447474 330 ntBASIC4.12□□□□□ -1.75
TRAPPC4Q9Y296 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.12□□□□□ -1.75
TRAPPC4Q9Y296 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC4.12□□□□□ -1.75
TRAPPC4Q9Y296 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.12□□□□□ -1.75
TRAPPC4Q9Y296 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC4.12□□□□□ -1.75
TRAPPC4Q9Y296 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC4.12□□□□□ -1.75
TRAPPC4Q9Y296 PARP4P3-201ENST00000510265 317 ntBASIC4.12□□□□□ -1.75
TRAPPC4Q9Y296 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.12□□□□□ -1.75
TRAPPC4Q9Y296 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC4.12□□□□□ -1.75
TRAPPC4Q9Y296 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.12□□□□□ -1.75
TRAPPC4Q9Y296 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC4.12□□□□□ -1.75
TRAPPC4Q9Y296 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.12□□□□□ -1.75
TRAPPC4Q9Y296 AC063949.1-201ENST00000552900 865 ntBASIC4.12□□□□□ -1.75
TRAPPC4Q9Y296 AL121839.1-201ENST00000556233 1185 ntBASIC4.12□□□□□ -1.75
TRAPPC4Q9Y296 AL049874.4-201ENST00000557593 255 ntBASIC4.12□□□□□ -1.75
TRAPPC4Q9Y296 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.12□□□□□ -1.75
TRAPPC4Q9Y296 FAM60CP-201ENST00000591086 664 ntBASIC4.12□□□□□ -1.75
TRAPPC4Q9Y296 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
TRAPPC4Q9Y296 AC068790.7-201ENST00000602347 528 ntBASIC4.12□□□□□ -1.75
TRAPPC4Q9Y296 AC008536.1-201ENST00000602872 669 ntBASIC4.12□□□□□ -1.75
TRAPPC4Q9Y296 AL023881.1-201ENST00000621088 301 ntBASIC4.12□□□□□ -1.75
TRAPPC4Q9Y296 AC021106.3-201ENST00000623925 531 ntBASIC4.12□□□□□ -1.75
TRAPPC4Q9Y296 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.12□□□□□ -1.75
TRAPPC4Q9Y296 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
TRAPPC4Q9Y296 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
TRAPPC4Q9Y296 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
TRAPPC4Q9Y296 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.12□□□□□ -1.75
TRAPPC4Q9Y296 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
TRAPPC4Q9Y296 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.12□□□□□ -1.75
TRAPPC4Q9Y296 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.12□□□□□ -1.75
TRAPPC4Q9Y296 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.12□□□□□ -1.75
TRAPPC4Q9Y296 DHX40P1-201ENST00000588725 1412 ntBASIC4.12□□□□□ -1.75
TRAPPC4Q9Y296 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.12□□□□□ -1.75
TRAPPC4Q9Y296 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 70.8 ms