Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 AC073342.2-201ENST00000595842 1800 ntBASIC9.04□□□□□ -0.96
TRIM35Q9UPQ4 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
TRIM35Q9UPQ4 RNU4-31P-201ENST00000384211 141 ntBASIC9.04□□□□□ -0.96
TRIM35Q9UPQ4 Y_RNA.477-201ENST00000384352 108 ntBASIC9.04□□□□□ -0.96
TRIM35Q9UPQ4 RNU6-125P-201ENST00000384505 107 ntBASIC9.04□□□□□ -0.96
TRIM35Q9UPQ4 AL078604.1-201ENST00000404609 466 ntBASIC9.04□□□□□ -0.96
TRIM35Q9UPQ4 BTBD10P2-201ENST00000404779 676 ntBASIC9.04□□□□□ -0.96
TRIM35Q9UPQ4 ERMN-202ENST00000409216 746 ntTSL 4 BASIC9.04□□□□□ -0.96
TRIM35Q9UPQ4 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC9.04□□□□□ -0.96
TRIM35Q9UPQ4 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC9.04□□□□□ -0.96
TRIM35Q9UPQ4 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC9.04□□□□□ -0.96
TRIM35Q9UPQ4 RSL24D1P6-201ENST00000426934 401 ntBASIC9.04□□□□□ -0.96
TRIM35Q9UPQ4 GPR143P-201ENST00000434155 205 ntBASIC9.04□□□□□ -0.96
TRIM35Q9UPQ4 GOT2P2-201ENST00000450663 1251 ntBASIC9.04□□□□□ -0.96
TRIM35Q9UPQ4 AC002456.2-201ENST00000509356 380 ntBASIC9.04□□□□□ -0.96
TRIM35Q9UPQ4 IGHVIII-76-1-201ENST00000523776 286 ntBASIC9.04□□□□□ -0.96
TRIM35Q9UPQ4 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC9.04□□□□□ -0.96
TRIM35Q9UPQ4 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC9.04□□□□□ -0.96
TRIM35Q9UPQ4 AC068831.6-201ENST00000560522 795 ntTSL 3 BASIC9.04□□□□□ -0.96
TRIM35Q9UPQ4 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC9.04□□□□□ -0.96
TRIM35Q9UPQ4 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC9.04□□□□□ -0.96
TRIM35Q9UPQ4 AP005230.1-204ENST00000579097 779 ntTSL 2 BASIC9.04□□□□□ -0.96
TRIM35Q9UPQ4 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC9.04□□□□□ -0.96
TRIM35Q9UPQ4 AC068020.1-201ENST00000594215 661 ntBASIC9.04□□□□□ -0.96
TRIM35Q9UPQ4 AC020914.7-201ENST00000594477 545 ntBASIC9.04□□□□□ -0.96
TRIM35Q9UPQ4 AC130352.1-201ENST00000602979 661 ntBASIC9.04□□□□□ -0.96
TRIM35Q9UPQ4 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC9.04□□□□□ -0.96
TRIM35Q9UPQ4 TEX41-238ENST00000604253 709 ntTSL 5 BASIC9.04□□□□□ -0.96
TRIM35Q9UPQ4 AL022099.1-201ENST00000604551 712 ntBASIC9.04□□□□□ -0.96
TRIM35Q9UPQ4 AC012409.4-201ENST00000612923 249 ntBASIC9.04□□□□□ -0.96
TRIM35Q9UPQ4 SNORA16A-202ENST00000628458 135 ntBASIC9.04□□□□□ -0.96
TRIM35Q9UPQ4 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC9.04□□□□□ -0.96
TRIM35Q9UPQ4 ZNF793-201ENST00000445217 6712 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
TRIM35Q9UPQ4 ANO6-201ENST00000320560 5975 ntAPPRIS P3 TSL 1 (best) BASIC9.04□□□□□ -0.96
TRIM35Q9UPQ4 GDPD4-202ENST00000376217 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
TRIM35Q9UPQ4 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC9.04□□□□□ -0.96
TRIM35Q9UPQ4 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC9.04□□□□□ -0.96
TRIM35Q9UPQ4 ZNF350-201ENST00000243644 2338 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
TRIM35Q9UPQ4 AC008560.1-201ENST00000510585 1766 ntAPPRIS P5 TSL 2 BASIC9.04□□□□□ -0.96
TRIM35Q9UPQ4 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC9.04□□□□□ -0.96
TRIM35Q9UPQ4 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC9.04□□□□□ -0.96
TRIM35Q9UPQ4 DMTF1-213ENST00000432937 2411 ntTSL 2 BASIC9.03□□□□□ -0.96
TRIM35Q9UPQ4 TRIM6-TRIM34-201ENST00000354852 3391 ntAPPRIS P1 TSL 2 BASIC9.03□□□□□ -0.96
TRIM35Q9UPQ4 UTY-210ENST00000538878 6574 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
TRIM35Q9UPQ4 PIGN-233ENST00000639342 4305 ntTSL 5 BASIC9.03□□□□□ -0.96
TRIM35Q9UPQ4 KAT14-202ENST00000435364 3618 ntAPPRIS P2 TSL 1 (best) BASIC9.03□□□□□ -0.96
TRIM35Q9UPQ4 ERBB4-205ENST00000436443 12084 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
TRIM35Q9UPQ4 AC244100.2-202ENST00000612584 3878 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
TRIM35Q9UPQ4 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC9.03□□□□□ -0.96
TRIM35Q9UPQ4 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
TRIM35Q9UPQ4 Y_RNA.25-201ENST00000362528 102 ntBASIC9.03□□□□□ -0.96
TRIM35Q9UPQ4 S100A7L2-201ENST00000368725 339 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
TRIM35Q9UPQ4 TMSB4XP8-201ENST00000402089 135 ntBASIC9.03□□□□□ -0.96
TRIM35Q9UPQ4 RNU2-38P-201ENST00000410856 79 ntBASIC9.03□□□□□ -0.96
TRIM35Q9UPQ4 TMSB4XP6-201ENST00000415187 135 ntBASIC9.03□□□□□ -0.96
TRIM35Q9UPQ4 TMSB4XP1-201ENST00000424567 135 ntBASIC9.03□□□□□ -0.96
TRIM35Q9UPQ4 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC9.03□□□□□ -0.96
TRIM35Q9UPQ4 PUDPP2-201ENST00000431423 643 ntBASIC9.03□□□□□ -0.96
TRIM35Q9UPQ4 AL022324.2-201ENST00000434827 780 ntBASIC9.03□□□□□ -0.96
TRIM35Q9UPQ4 AC083855.1-201ENST00000440041 258 ntBASIC9.03□□□□□ -0.96
TRIM35Q9UPQ4 AL157896.1-201ENST00000451617 790 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
TRIM35Q9UPQ4 NDUFAF4P3-201ENST00000456468 525 ntBASIC9.03□□□□□ -0.96
TRIM35Q9UPQ4 RNU7-66P-201ENST00000459469 62 ntBASIC9.03□□□□□ -0.96
TRIM35Q9UPQ4 RPL7P51-201ENST00000490532 749 ntBASIC9.03□□□□□ -0.96
TRIM35Q9UPQ4 RNU6-150P-201ENST00000516237 95 ntBASIC9.03□□□□□ -0.96
TRIM35Q9UPQ4 RNU6-566P-201ENST00000516790 107 ntBASIC9.03□□□□□ -0.96
TRIM35Q9UPQ4 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC9.03□□□□□ -0.96
TRIM35Q9UPQ4 IGLVVI-25-1-201ENST00000521893 249 ntBASIC9.03□□□□□ -0.96
TRIM35Q9UPQ4 AP001107.4-201ENST00000533576 539 ntTSL 3 BASIC9.03□□□□□ -0.96
TRIM35Q9UPQ4 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC9.03□□□□□ -0.96
TRIM35Q9UPQ4 AC145350.2-201ENST00000561541 821 ntTSL 5 BASIC9.03□□□□□ -0.96
TRIM35Q9UPQ4 AC011468.4-201ENST00000603942 409 ntBASIC9.03□□□□□ -0.96
TRIM35Q9UPQ4 AC007255.2-201ENST00000604053 631 ntBASIC9.03□□□□□ -0.96
TRIM35Q9UPQ4 MIR6849-201ENST00000618543 69 ntBASIC9.03□□□□□ -0.96
TRIM35Q9UPQ4 ZNF438-208ENST00000538351 3284 ntAPPRIS ALT2 TSL 2 BASIC9.03□□□□□ -0.96
TRIM35Q9UPQ4 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
TRIM35Q9UPQ4 TMCC1-203ENST00000432054 5631 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
TRIM35Q9UPQ4 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC9.03□□□□□ -0.96
TRIM35Q9UPQ4 CAGE1-203ENST00000379918 2877 ntAPPRIS ALT2 TSL 5 BASIC9.02□□□□□ -0.96
TRIM35Q9UPQ4 TMEM135-202ENST00000340353 3938 ntTSL 1 (best) BASIC9.02□□□□□ -0.96
TRIM35Q9UPQ4 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.96
TRIM35Q9UPQ4 ATAD1-202ENST00000328142 2939 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
TRIM35Q9UPQ4 CA10-204ENST00000570565 2276 ntTSL 5 BASIC9.02□□□□□ -0.96
TRIM35Q9UPQ4 MMACHC-201ENST00000401061 5296 ntAPPRIS P1 TSL 2 BASIC9.02□□□□□ -0.97
TRIM35Q9UPQ4 NLGN4X-201ENST00000275857 5454 ntAPPRIS P2 TSL 1 (best) BASIC9.02□□□□□ -0.97
TRIM35Q9UPQ4 AC087477.2-202ENST00000558499 4856 ntTSL 4 BASIC9.02□□□□□ -0.97
TRIM35Q9UPQ4 U3.12-201ENST00000364498 214 ntBASIC9.02□□□□□ -0.97
TRIM35Q9UPQ4 RNU6-1027P-201ENST00000383998 107 ntBASIC9.02□□□□□ -0.97
TRIM35Q9UPQ4 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC9.02□□□□□ -0.97
TRIM35Q9UPQ4 AC093155.2-201ENST00000420734 937 ntBASIC9.02□□□□□ -0.97
TRIM35Q9UPQ4 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC9.02□□□□□ -0.97
TRIM35Q9UPQ4 RPS10P14-201ENST00000440748 502 ntBASIC9.02□□□□□ -0.97
TRIM35Q9UPQ4 AL353093.1-201ENST00000441292 436 ntBASIC9.02□□□□□ -0.97
TRIM35Q9UPQ4 DDX3P2-201ENST00000446138 111 ntBASIC9.02□□□□□ -0.97
TRIM35Q9UPQ4 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC9.02□□□□□ -0.97
TRIM35Q9UPQ4 AL450345.1-201ENST00000456118 311 ntTSL 3 BASIC9.02□□□□□ -0.97
TRIM35Q9UPQ4 CREM-226ENST00000469949 721 ntTSL 3 BASIC9.02□□□□□ -0.97
TRIM35Q9UPQ4 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC9.02□□□□□ -0.97
TRIM35Q9UPQ4 AC108159.1-201ENST00000505408 489 ntTSL 3 BASIC9.02□□□□□ -0.97
TRIM35Q9UPQ4 OR52H2P-201ENST00000514607 902 ntBASIC9.02□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms