Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 IGLVIV-65-201ENST00000517313 360 ntBASIC4.03□□□□□ -1.76
CLCF1Q9UBD9 HMGB1P19-201ENST00000517578 577 ntBASIC4.03□□□□□ -1.76
CLCF1Q9UBD9 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.03□□□□□ -1.76
CLCF1Q9UBD9 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
CLCF1Q9UBD9 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.03□□□□□ -1.76
CLCF1Q9UBD9 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC4.03□□□□□ -1.76
CLCF1Q9UBD9 AC067805.1-201ENST00000559344 470 ntBASIC4.03□□□□□ -1.76
CLCF1Q9UBD9 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.03□□□□□ -1.76
CLCF1Q9UBD9 AP001160.4-201ENST00000596971 382 ntBASIC4.03□□□□□ -1.76
CLCF1Q9UBD9 AC023762.1-201ENST00000603280 584 ntBASIC4.03□□□□□ -1.76
CLCF1Q9UBD9 AC100814.1-201ENST00000606963 623 ntBASIC4.03□□□□□ -1.76
CLCF1Q9UBD9 AC019131.2-201ENST00000609071 870 ntBASIC4.03□□□□□ -1.76
CLCF1Q9UBD9 AC084036.1-201ENST00000609190 508 ntBASIC4.03□□□□□ -1.76
CLCF1Q9UBD9 AL445423.1-201ENST00000609941 536 ntBASIC4.03□□□□□ -1.76
CLCF1Q9UBD9 AL121890.3-201ENST00000618494 516 ntBASIC4.03□□□□□ -1.76
CLCF1Q9UBD9 AC006840.1-201ENST00000623069 542 ntBASIC4.03□□□□□ -1.76
CLCF1Q9UBD9 AC119674.1-220ENST00000641502 1048 ntBASIC4.03□□□□□ -1.76
CLCF1Q9UBD9 LINC01808-202ENST00000641680 1116 ntBASIC4.03□□□□□ -1.76
CLCF1Q9UBD9 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
CLCF1Q9UBD9 AL355852.1-201ENST00000454081 1771 ntBASIC4.03□□□□□ -1.76
CLCF1Q9UBD9 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC4.03□□□□□ -1.76
CLCF1Q9UBD9 AC025031.4-201ENST00000621248 3271 ntBASIC4.03□□□□□ -1.76
CLCF1Q9UBD9 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.03□□□□□ -1.76
CLCF1Q9UBD9 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC4.03□□□□□ -1.76
CLCF1Q9UBD9 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
CLCF1Q9UBD9 MFSD8-242ENST00000641690 4199 ntBASIC4.03□□□□□ -1.76
CLCF1Q9UBD9 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
CLCF1Q9UBD9 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
CLCF1Q9UBD9 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.03□□□□□ -1.77
CLCF1Q9UBD9 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.03□□□□□ -1.77
CLCF1Q9UBD9 OR51H2P-202ENST00000641424 3046 ntBASIC4.03□□□□□ -1.77
CLCF1Q9UBD9 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.77
CLCF1Q9UBD9 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.02□□□□□ -1.77
CLCF1Q9UBD9 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.02□□□□□ -1.77
CLCF1Q9UBD9 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
CLCF1Q9UBD9 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
CLCF1Q9UBD9 AC097461.1-201ENST00000568928 2821 ntBASIC4.02□□□□□ -1.77
CLCF1Q9UBD9 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
CLCF1Q9UBD9 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CLCF1Q9UBD9 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CLCF1Q9UBD9 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC4.02□□□□□ -1.77
CLCF1Q9UBD9 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CLCF1Q9UBD9 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CLCF1Q9UBD9 RNU1-83P-201ENST00000363426 164 ntBASIC4.02□□□□□ -1.77
CLCF1Q9UBD9 RNU4-7P-201ENST00000364758 141 ntBASIC4.02□□□□□ -1.77
CLCF1Q9UBD9 AL359643.1-201ENST00000404109 423 ntBASIC4.02□□□□□ -1.77
CLCF1Q9UBD9 RPL5P19-201ENST00000404228 893 ntBASIC4.02□□□□□ -1.77
CLCF1Q9UBD9 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC4.02□□□□□ -1.77
CLCF1Q9UBD9 TMSB10P2-201ENST00000416049 131 ntBASIC4.02□□□□□ -1.77
CLCF1Q9UBD9 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC4.02□□□□□ -1.77
CLCF1Q9UBD9 RAD23BP1-201ENST00000421404 1227 ntBASIC4.02□□□□□ -1.77
CLCF1Q9UBD9 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC4.02□□□□□ -1.77
CLCF1Q9UBD9 SETP10-201ENST00000424368 814 ntBASIC4.02□□□□□ -1.77
CLCF1Q9UBD9 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC4.02□□□□□ -1.77
CLCF1Q9UBD9 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC4.02□□□□□ -1.77
CLCF1Q9UBD9 AC091390.1-201ENST00000433904 331 ntBASIC4.02□□□□□ -1.77
CLCF1Q9UBD9 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.02□□□□□ -1.77
CLCF1Q9UBD9 FTH1P16-201ENST00000435241 552 ntBASIC4.02□□□□□ -1.77
CLCF1Q9UBD9 AC073143.1-201ENST00000436316 395 ntBASIC4.02□□□□□ -1.77
CLCF1Q9UBD9 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC4.02□□□□□ -1.77
CLCF1Q9UBD9 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC4.02□□□□□ -1.77
CLCF1Q9UBD9 RPL23AP43-201ENST00000446445 471 ntBASIC4.02□□□□□ -1.77
CLCF1Q9UBD9 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CLCF1Q9UBD9 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.02□□□□□ -1.77
CLCF1Q9UBD9 AC069277.2-201ENST00000454211 432 ntBASIC4.02□□□□□ -1.77
CLCF1Q9UBD9 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.02□□□□□ -1.77
CLCF1Q9UBD9 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC4.02□□□□□ -1.77
CLCF1Q9UBD9 AC108043.1-201ENST00000512696 574 ntBASIC4.02□□□□□ -1.77
CLCF1Q9UBD9 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC4.02□□□□□ -1.77
CLCF1Q9UBD9 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC4.02□□□□□ -1.77
CLCF1Q9UBD9 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC4.02□□□□□ -1.77
CLCF1Q9UBD9 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC4.02□□□□□ -1.77
CLCF1Q9UBD9 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC4.02□□□□□ -1.77
CLCF1Q9UBD9 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.02□□□□□ -1.77
CLCF1Q9UBD9 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC4.02□□□□□ -1.77
CLCF1Q9UBD9 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC4.02□□□□□ -1.77
CLCF1Q9UBD9 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.02□□□□□ -1.77
CLCF1Q9UBD9 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.02□□□□□ -1.77
CLCF1Q9UBD9 MIR4675-201ENST00000577898 77 ntBASIC4.02□□□□□ -1.77
CLCF1Q9UBD9 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.02□□□□□ -1.77
CLCF1Q9UBD9 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC4.02□□□□□ -1.77
CLCF1Q9UBD9 SNX6P1-201ENST00000601728 1224 ntBASIC4.02□□□□□ -1.77
CLCF1Q9UBD9 AC022106.2-201ENST00000620114 757 ntBASIC4.02□□□□□ -1.77
CLCF1Q9UBD9 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
CLCF1Q9UBD9 AC006065.6-201ENST00000625201 545 ntBASIC4.02□□□□□ -1.77
CLCF1Q9UBD9 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CLCF1Q9UBD9 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.02□□□□□ -1.77
CLCF1Q9UBD9 AC005332.5-201ENST00000591222 2919 ntBASIC4.02□□□□□ -1.77
CLCF1Q9UBD9 AC006971.1-201ENST00000407916 4486 ntBASIC4.02□□□□□ -1.77
CLCF1Q9UBD9 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CLCF1Q9UBD9 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC4.02□□□□□ -1.77
CLCF1Q9UBD9 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.01□□□□□ -1.77
CLCF1Q9UBD9 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CLCF1Q9UBD9 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CLCF1Q9UBD9 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CLCF1Q9UBD9 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
CLCF1Q9UBD9 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CLCF1Q9UBD9 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.01□□□□□ -1.77
CLCF1Q9UBD9 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
CLCF1Q9UBD9 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms