Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 TRIM60P5Y-201ENST00000413946 574 ntBASIC5.63□□□□□ -1.51
COL20A1Q9P218 LINC01881-201ENST00000416103 412 ntBASIC5.63□□□□□ -1.51
COL20A1Q9P218 AC019050.1-201ENST00000418508 492 ntBASIC5.63□□□□□ -1.51
COL20A1Q9P218 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC5.63□□□□□ -1.51
COL20A1Q9P218 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC5.63□□□□□ -1.51
COL20A1Q9P218 RPL7P29-201ENST00000437151 728 ntBASIC5.63□□□□□ -1.51
COL20A1Q9P218 AC000111.2-201ENST00000448200 210 ntBASIC5.63□□□□□ -1.51
COL20A1Q9P218 PRPF38AP1-201ENST00000451976 933 ntBASIC5.63□□□□□ -1.51
COL20A1Q9P218 AURKAPS2-201ENST00000454983 333 ntBASIC5.63□□□□□ -1.51
COL20A1Q9P218 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC5.63□□□□□ -1.51
COL20A1Q9P218 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC5.63□□□□□ -1.51
COL20A1Q9P218 AC134050.1-201ENST00000495088 933 ntBASIC5.63□□□□□ -1.51
COL20A1Q9P218 MTND4LP2-201ENST00000502312 285 ntBASIC5.63□□□□□ -1.51
COL20A1Q9P218 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC5.63□□□□□ -1.51
COL20A1Q9P218 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.63□□□□□ -1.51
COL20A1Q9P218 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC5.63□□□□□ -1.51
COL20A1Q9P218 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.63□□□□□ -1.51
COL20A1Q9P218 AC063949.1-201ENST00000552900 865 ntBASIC5.63□□□□□ -1.51
COL20A1Q9P218 NDUFB4P11-201ENST00000560510 395 ntBASIC5.63□□□□□ -1.51
COL20A1Q9P218 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
COL20A1Q9P218 CYP2C60P-201ENST00000566088 139 ntBASIC5.63□□□□□ -1.51
COL20A1Q9P218 MIR4330-201ENST00000579077 105 ntBASIC5.63□□□□□ -1.51
COL20A1Q9P218 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC5.63□□□□□ -1.51
COL20A1Q9P218 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC5.63□□□□□ -1.51
COL20A1Q9P218 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC5.63□□□□□ -1.51
COL20A1Q9P218 AC125494.2-201ENST00000602431 657 ntBASIC5.63□□□□□ -1.51
COL20A1Q9P218 AL391358.1-201ENST00000605342 190 ntBASIC5.63□□□□□ -1.51
COL20A1Q9P218 AC090525.3-201ENST00000605601 189 ntBASIC5.63□□□□□ -1.51
COL20A1Q9P218 AC013468.1-201ENST00000608680 598 ntBASIC5.63□□□□□ -1.51
COL20A1Q9P218 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.63□□□□□ -1.51
COL20A1Q9P218 AC006386.1-201ENST00000619436 415 ntBASIC5.63□□□□□ -1.51
COL20A1Q9P218 AL022401.1-201ENST00000619498 108 ntBASIC5.63□□□□□ -1.51
COL20A1Q9P218 AP003497.2-201ENST00000624220 967 ntBASIC5.63□□□□□ -1.51
COL20A1Q9P218 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC5.63□□□□□ -1.51
COL20A1Q9P218 GMFB-210ENST00000628554 639 ntTSL 4 BASIC5.63□□□□□ -1.51
COL20A1Q9P218 AC090897.3-201ENST00000636973 1157 ntBASIC5.63□□□□□ -1.51
COL20A1Q9P218 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
COL20A1Q9P218 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
COL20A1Q9P218 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
COL20A1Q9P218 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
COL20A1Q9P218 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
COL20A1Q9P218 MFSD8-220ENST00000641243 1422 ntBASIC5.63□□□□□ -1.51
COL20A1Q9P218 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
COL20A1Q9P218 AP000473.2-201ENST00000602659 1537 ntBASIC5.63□□□□□ -1.51
COL20A1Q9P218 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.63□□□□□ -1.51
COL20A1Q9P218 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.62□□□□□ -1.51
COL20A1Q9P218 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
COL20A1Q9P218 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
COL20A1Q9P218 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC5.62□□□□□ -1.51
COL20A1Q9P218 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
COL20A1Q9P218 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
COL20A1Q9P218 SNORA62.2-201ENST00000364672 152 ntBASIC5.62□□□□□ -1.51
COL20A1Q9P218 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC5.62□□□□□ -1.51
COL20A1Q9P218 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC5.62□□□□□ -1.51
COL20A1Q9P218 RPS7P9-201ENST00000414704 586 ntBASIC5.62□□□□□ -1.51
COL20A1Q9P218 TBCAP2-201ENST00000416175 326 ntBASIC5.62□□□□□ -1.51
COL20A1Q9P218 AL590139.1-201ENST00000416267 400 ntBASIC5.62□□□□□ -1.51
COL20A1Q9P218 DNAJA1P1-201ENST00000425106 1187 ntBASIC5.62□□□□□ -1.51
COL20A1Q9P218 AC092634.2-201ENST00000428146 1010 ntBASIC5.62□□□□□ -1.51
COL20A1Q9P218 OR2B7P-201ENST00000429302 934 ntBASIC5.62□□□□□ -1.51
COL20A1Q9P218 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC5.62□□□□□ -1.51
COL20A1Q9P218 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC5.62□□□□□ -1.51
COL20A1Q9P218 CR769776.1-201ENST00000441254 787 ntBASIC5.62□□□□□ -1.51
COL20A1Q9P218 CEACAMP9-201ENST00000442990 513 ntBASIC5.62□□□□□ -1.51
COL20A1Q9P218 AC011753.3-201ENST00000443436 406 ntBASIC5.62□□□□□ -1.51
COL20A1Q9P218 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC5.62□□□□□ -1.51
COL20A1Q9P218 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC5.62□□□□□ -1.51
COL20A1Q9P218 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC5.62□□□□□ -1.51
COL20A1Q9P218 AC244505.3-201ENST00000454598 187 ntBASIC5.62□□□□□ -1.51
COL20A1Q9P218 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC5.62□□□□□ -1.51
COL20A1Q9P218 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
COL20A1Q9P218 AC096992.1-201ENST00000459808 709 ntBASIC5.62□□□□□ -1.51
COL20A1Q9P218 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC5.62□□□□□ -1.51
COL20A1Q9P218 MTCO2P6-201ENST00000463134 685 ntBASIC5.62□□□□□ -1.51
COL20A1Q9P218 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC5.62□□□□□ -1.51
COL20A1Q9P218 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC5.62□□□□□ -1.51
COL20A1Q9P218 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
COL20A1Q9P218 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC5.62□□□□□ -1.51
COL20A1Q9P218 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC5.62□□□□□ -1.51
COL20A1Q9P218 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC5.62□□□□□ -1.51
COL20A1Q9P218 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC5.62□□□□□ -1.51
COL20A1Q9P218 AC083923.1-201ENST00000523708 376 ntBASIC5.62□□□□□ -1.51
COL20A1Q9P218 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC5.62□□□□□ -1.51
COL20A1Q9P218 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC5.62□□□□□ -1.51
COL20A1Q9P218 AP001880.2-201ENST00000538233 448 ntBASIC5.62□□□□□ -1.51
COL20A1Q9P218 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC5.62□□□□□ -1.51
COL20A1Q9P218 POLR2KP1-201ENST00000553226 168 ntBASIC5.62□□□□□ -1.51
COL20A1Q9P218 AC079075.1-201ENST00000559543 878 ntBASIC5.62□□□□□ -1.51
COL20A1Q9P218 AC091042.1-201ENST00000579213 173 ntBASIC5.62□□□□□ -1.51
COL20A1Q9P218 MIR4270-201ENST00000581799 70 ntBASIC5.62□□□□□ -1.51
COL20A1Q9P218 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
COL20A1Q9P218 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC5.62□□□□□ -1.51
COL20A1Q9P218 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC5.62□□□□□ -1.51
COL20A1Q9P218 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
COL20A1Q9P218 AC004908.3-201ENST00000610248 625 ntBASIC5.62□□□□□ -1.51
COL20A1Q9P218 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
COL20A1Q9P218 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
COL20A1Q9P218 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
COL20A1Q9P218 AC109454.4-201ENST00000623411 649 ntBASIC5.62□□□□□ -1.51
COL20A1Q9P218 SUCLA2P2-201ENST00000417269 1309 ntBASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms