Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC5.34□□□□□ -1.55
BLOC1S4Q9NUP1 MTATP6P2-201ENST00000603319 678 ntBASIC5.34□□□□□ -1.55
BLOC1S4Q9NUP1 AL158211.2-201ENST00000607282 395 ntBASIC5.34□□□□□ -1.55
BLOC1S4Q9NUP1 AC120053.1-201ENST00000607706 736 ntBASIC5.34□□□□□ -1.55
BLOC1S4Q9NUP1 RMST_10.1-201ENST00000616309 154 ntBASIC5.34□□□□□ -1.55
BLOC1S4Q9NUP1 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC5.34□□□□□ -1.55
BLOC1S4Q9NUP1 AC006249.1-201ENST00000621223 471 ntBASIC5.34□□□□□ -1.55
BLOC1S4Q9NUP1 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC5.34□□□□□ -1.55
BLOC1S4Q9NUP1 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC5.34□□□□□ -1.55
BLOC1S4Q9NUP1 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
BLOC1S4Q9NUP1 USP9YP4-201ENST00000424401 1745 ntBASIC5.34□□□□□ -1.56
BLOC1S4Q9NUP1 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
BLOC1S4Q9NUP1 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.56
BLOC1S4Q9NUP1 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.56
BLOC1S4Q9NUP1 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
BLOC1S4Q9NUP1 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
BLOC1S4Q9NUP1 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
BLOC1S4Q9NUP1 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
BLOC1S4Q9NUP1 CYP1D1P-201ENST00000416662 1433 ntBASIC5.33□□□□□ -1.56
BLOC1S4Q9NUP1 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
BLOC1S4Q9NUP1 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC5.33□□□□□ -1.56
BLOC1S4Q9NUP1 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
BLOC1S4Q9NUP1 SALL4P2-201ENST00000423288 2910 ntBASIC5.33□□□□□ -1.56
BLOC1S4Q9NUP1 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC5.33□□□□□ -1.56
BLOC1S4Q9NUP1 AC011155.1-201ENST00000316512 456 ntBASIC5.33□□□□□ -1.56
BLOC1S4Q9NUP1 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
BLOC1S4Q9NUP1 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC5.33□□□□□ -1.56
BLOC1S4Q9NUP1 SNORD56.4-201ENST00000363883 71 ntBASIC5.33□□□□□ -1.56
BLOC1S4Q9NUP1 SNORA58B-201ENST00000364259 136 ntBASIC5.33□□□□□ -1.56
BLOC1S4Q9NUP1 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
BLOC1S4Q9NUP1 AL590762.2-201ENST00000395798 571 ntBASIC5.33□□□□□ -1.56
BLOC1S4Q9NUP1 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC5.33□□□□□ -1.56
BLOC1S4Q9NUP1 VN1R54P-201ENST00000435210 1049 ntBASIC5.33□□□□□ -1.56
BLOC1S4Q9NUP1 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.33□□□□□ -1.56
BLOC1S4Q9NUP1 AC004938.1-201ENST00000438468 308 ntBASIC5.33□□□□□ -1.56
BLOC1S4Q9NUP1 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC5.33□□□□□ -1.56
BLOC1S4Q9NUP1 TPTE2P6-202ENST00000445572 1007 ntBASIC5.33□□□□□ -1.56
BLOC1S4Q9NUP1 TDGF1P1-201ENST00000445734 527 ntBASIC5.33□□□□□ -1.56
BLOC1S4Q9NUP1 OR52A4P-201ENST00000472867 958 ntBASIC5.33□□□□□ -1.56
BLOC1S4Q9NUP1 IGLV2-34-201ENST00000490007 283 ntBASIC5.33□□□□□ -1.56
BLOC1S4Q9NUP1 AC104971.1-201ENST00000495117 578 ntBASIC5.33□□□□□ -1.56
BLOC1S4Q9NUP1 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC5.33□□□□□ -1.56
BLOC1S4Q9NUP1 NDUFB5P1-201ENST00000508134 564 ntBASIC5.33□□□□□ -1.56
BLOC1S4Q9NUP1 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC5.33□□□□□ -1.56
BLOC1S4Q9NUP1 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC5.33□□□□□ -1.56
BLOC1S4Q9NUP1 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC5.33□□□□□ -1.56
BLOC1S4Q9NUP1 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC5.33□□□□□ -1.56
BLOC1S4Q9NUP1 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC5.33□□□□□ -1.56
BLOC1S4Q9NUP1 AC133555.2-201ENST00000550213 292 ntBASIC5.33□□□□□ -1.56
BLOC1S4Q9NUP1 AC105129.1-201ENST00000560250 297 ntBASIC5.33□□□□□ -1.56
BLOC1S4Q9NUP1 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC5.33□□□□□ -1.56
BLOC1S4Q9NUP1 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC5.33□□□□□ -1.56
BLOC1S4Q9NUP1 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC5.33□□□□□ -1.56
BLOC1S4Q9NUP1 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC5.33□□□□□ -1.56
BLOC1S4Q9NUP1 AC125494.3-201ENST00000602759 455 ntBASIC5.33□□□□□ -1.56
BLOC1S4Q9NUP1 FAM27B-201ENST00000610601 213 ntBASIC5.33□□□□□ -1.56
BLOC1S4Q9NUP1 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC5.33□□□□□ -1.56
BLOC1S4Q9NUP1 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
BLOC1S4Q9NUP1 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
BLOC1S4Q9NUP1 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
BLOC1S4Q9NUP1 AC134882.1-201ENST00000603738 1676 ntBASIC5.33□□□□□ -1.56
BLOC1S4Q9NUP1 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
BLOC1S4Q9NUP1 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.33□□□□□ -1.56
BLOC1S4Q9NUP1 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
BLOC1S4Q9NUP1 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.33□□□□□ -1.56
BLOC1S4Q9NUP1 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
BLOC1S4Q9NUP1 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
BLOC1S4Q9NUP1 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
BLOC1S4Q9NUP1 ST7-212ENST00000422922 1887 ntTSL 5 BASIC5.32□□□□□ -1.56
BLOC1S4Q9NUP1 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
BLOC1S4Q9NUP1 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC5.32□□□□□ -1.56
BLOC1S4Q9NUP1 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
BLOC1S4Q9NUP1 MFSD8-213ENST00000641134 1327 ntBASIC5.32□□□□□ -1.56
BLOC1S4Q9NUP1 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
BLOC1S4Q9NUP1 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
BLOC1S4Q9NUP1 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
BLOC1S4Q9NUP1 AL645733.1-201ENST00000402250 217 ntBASIC5.32□□□□□ -1.56
BLOC1S4Q9NUP1 AL592291.1-201ENST00000403830 352 ntBASIC5.32□□□□□ -1.56
BLOC1S4Q9NUP1 RNA5SP113-201ENST00000410486 84 ntBASIC5.32□□□□□ -1.56
BLOC1S4Q9NUP1 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
BLOC1S4Q9NUP1 AL590762.4-201ENST00000425885 253 ntBASIC5.32□□□□□ -1.56
BLOC1S4Q9NUP1 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC5.32□□□□□ -1.56
BLOC1S4Q9NUP1 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC5.32□□□□□ -1.56
BLOC1S4Q9NUP1 MTND6P18-201ENST00000439477 513 ntBASIC5.32□□□□□ -1.56
BLOC1S4Q9NUP1 ACTR3P2-201ENST00000439585 1257 ntBASIC5.32□□□□□ -1.56
BLOC1S4Q9NUP1 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC5.32□□□□□ -1.56
BLOC1S4Q9NUP1 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC5.32□□□□□ -1.56
BLOC1S4Q9NUP1 OTX2P1-201ENST00000450956 354 ntBASIC5.32□□□□□ -1.56
BLOC1S4Q9NUP1 AL035407.2-201ENST00000454090 378 ntBASIC5.32□□□□□ -1.56
BLOC1S4Q9NUP1 RPS3AP53-201ENST00000454716 778 ntBASIC5.32□□□□□ -1.56
BLOC1S4Q9NUP1 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
BLOC1S4Q9NUP1 RPS5P7-201ENST00000456664 608 ntBASIC5.32□□□□□ -1.56
BLOC1S4Q9NUP1 AC063943.1-201ENST00000465434 453 ntBASIC5.32□□□□□ -1.56
BLOC1S4Q9NUP1 TRBV8-2-201ENST00000475637 270 ntBASIC5.32□□□□□ -1.56
BLOC1S4Q9NUP1 RN7SL826P-201ENST00000479724 288 ntBASIC5.32□□□□□ -1.56
BLOC1S4Q9NUP1 UBA52P3-201ENST00000491303 382 ntBASIC5.32□□□□□ -1.56
BLOC1S4Q9NUP1 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC5.32□□□□□ -1.56
BLOC1S4Q9NUP1 AC121161.1-201ENST00000510606 652 ntBASIC5.32□□□□□ -1.56
BLOC1S4Q9NUP1 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC5.32□□□□□ -1.56
BLOC1S4Q9NUP1 COX6B1P6-201ENST00000522347 255 ntBASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms