Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 ENPP7P3-201ENST00000509123 241 ntBASIC6.16□□□□□ -1.42
SSU72Q9NP77 AC090958.1-201ENST00000511122 351 ntBASIC6.16□□□□□ -1.42
SSU72Q9NP77 AC105914.1-201ENST00000511798 226 ntBASIC6.16□□□□□ -1.42
SSU72Q9NP77 AC010634.1-201ENST00000513925 540 ntTSL 3 BASIC6.16□□□□□ -1.42
SSU72Q9NP77 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC6.16□□□□□ -1.42
SSU72Q9NP77 TPM3P3-201ENST00000521343 354 ntBASIC6.16□□□□□ -1.42
SSU72Q9NP77 AC083967.1-201ENST00000522354 515 ntTSL 3 BASIC6.16□□□□□ -1.42
SSU72Q9NP77 DEFB131D-201ENST00000526803 184 ntBASIC6.16□□□□□ -1.42
SSU72Q9NP77 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC6.16□□□□□ -1.42
SSU72Q9NP77 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC6.16□□□□□ -1.42
SSU72Q9NP77 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC6.16□□□□□ -1.42
SSU72Q9NP77 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC6.16□□□□□ -1.42
SSU72Q9NP77 POLR2KP1-201ENST00000553226 168 ntBASIC6.16□□□□□ -1.42
SSU72Q9NP77 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SSU72Q9NP77 CYCSP2-201ENST00000558168 301 ntBASIC6.16□□□□□ -1.42
SSU72Q9NP77 AL133457.1-201ENST00000564251 987 ntBASIC6.16□□□□□ -1.42
SSU72Q9NP77 AC141257.3-201ENST00000572906 215 ntBASIC6.16□□□□□ -1.42
SSU72Q9NP77 AC011193.2-201ENST00000582638 367 ntBASIC6.16□□□□□ -1.42
SSU72Q9NP77 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC6.16□□□□□ -1.42
SSU72Q9NP77 AC006115.2-201ENST00000596823 202 ntBASIC6.16□□□□□ -1.42
SSU72Q9NP77 AC097467.3-210ENST00000597939 705 ntTSL 5 BASIC6.16□□□□□ -1.42
SSU72Q9NP77 AC010680.3-201ENST00000604215 520 ntBASIC6.16□□□□□ -1.42
SSU72Q9NP77 AC055876.5-201ENST00000605667 259 ntBASIC6.16□□□□□ -1.42
SSU72Q9NP77 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
SSU72Q9NP77 AL355974.3-201ENST00000617383 467 ntBASIC6.16□□□□□ -1.42
SSU72Q9NP77 RNA5SP439-201ENST00000617595 124 ntBASIC6.16□□□□□ -1.42
SSU72Q9NP77 AC007347.2-201ENST00000623044 180 ntBASIC6.16□□□□□ -1.42
SSU72Q9NP77 VPS8-228ENST00000628962 207 ntTSL 5 BASIC6.16□□□□□ -1.42
SSU72Q9NP77 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SSU72Q9NP77 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SSU72Q9NP77 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC6.16□□□□□ -1.42
SSU72Q9NP77 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC6.16□□□□□ -1.42
SSU72Q9NP77 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SSU72Q9NP77 AC027575.3-201ENST00000583058 2747 ntBASIC6.16□□□□□ -1.42
SSU72Q9NP77 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SSU72Q9NP77 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SSU72Q9NP77 AP002512.4-202ENST00000641599 4530 ntBASIC6.16□□□□□ -1.42
SSU72Q9NP77 YES1-203ENST00000577961 4554 ntTSL 5 BASIC6.16□□□□□ -1.42
SSU72Q9NP77 NLRP3P1-201ENST00000622303 1785 ntBASIC6.16□□□□□ -1.42
SSU72Q9NP77 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC6.16□□□□□ -1.42
SSU72Q9NP77 IFIT1P1-201ENST00000400497 1449 ntBASIC6.16□□□□□ -1.42
SSU72Q9NP77 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
SSU72Q9NP77 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
SSU72Q9NP77 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC6.15□□□□□ -1.42
SSU72Q9NP77 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.42
SSU72Q9NP77 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
SSU72Q9NP77 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC6.15□□□□□ -1.42
SSU72Q9NP77 QRSL1P1-201ENST00000400977 1540 ntBASIC6.15□□□□□ -1.42
SSU72Q9NP77 SMG1P5-202ENST00000529428 4219 ntBASIC6.15□□□□□ -1.42
SSU72Q9NP77 SMG1P2-201ENST00000566127 4221 ntBASIC6.15□□□□□ -1.42
SSU72Q9NP77 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
SSU72Q9NP77 AC087516.1-201ENST00000561236 2428 ntBASIC6.15□□□□□ -1.42
SSU72Q9NP77 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
SSU72Q9NP77 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
SSU72Q9NP77 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.42
SSU72Q9NP77 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
SSU72Q9NP77 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
SSU72Q9NP77 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
SSU72Q9NP77 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.42
SSU72Q9NP77 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
SSU72Q9NP77 RNU6-492P-201ENST00000363035 104 ntBASIC6.15□□□□□ -1.42
SSU72Q9NP77 U3.10-201ENST00000364459 214 ntBASIC6.15□□□□□ -1.42
SSU72Q9NP77 RNU6-483P-201ENST00000384088 108 ntBASIC6.15□□□□□ -1.42
SSU72Q9NP77 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC6.15□□□□□ -1.42
SSU72Q9NP77 AL139128.1-201ENST00000413921 941 ntBASIC6.15□□□□□ -1.42
SSU72Q9NP77 CYTOR-207ENST00000414584 772 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
SSU72Q9NP77 BX295541.1-201ENST00000417774 250 ntBASIC6.15□□□□□ -1.42
SSU72Q9NP77 USP9YP27-201ENST00000418455 438 ntBASIC6.15□□□□□ -1.42
SSU72Q9NP77 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC6.15□□□□□ -1.42
SSU72Q9NP77 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC6.15□□□□□ -1.42
SSU72Q9NP77 AC009961.2-201ENST00000435771 251 ntBASIC6.15□□□□□ -1.42
SSU72Q9NP77 UBE2V1P5-201ENST00000440070 405 ntBASIC6.15□□□□□ -1.42
SSU72Q9NP77 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC6.15□□□□□ -1.42
SSU72Q9NP77 AC092809.1-201ENST00000441469 474 ntBASIC6.15□□□□□ -1.42
SSU72Q9NP77 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC6.15□□□□□ -1.42
SSU72Q9NP77 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC6.15□□□□□ -1.42
SSU72Q9NP77 MTND1P18-201ENST00000448191 573 ntBASIC6.15□□□□□ -1.42
SSU72Q9NP77 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC6.15□□□□□ -1.42
SSU72Q9NP77 OR6K1P-201ENST00000456766 971 ntBASIC6.15□□□□□ -1.42
SSU72Q9NP77 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC6.15□□□□□ -1.42
SSU72Q9NP77 RPS27P23-201ENST00000487608 251 ntBASIC6.15□□□□□ -1.42
SSU72Q9NP77 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
SSU72Q9NP77 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC6.15□□□□□ -1.42
SSU72Q9NP77 SMR3B-202ENST00000504825 489 ntAPPRIS P1 TSL 3 BASIC6.15□□□□□ -1.42
SSU72Q9NP77 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC6.15□□□□□ -1.42
SSU72Q9NP77 AC093870.1-201ENST00000506837 213 ntBASIC6.15□□□□□ -1.42
SSU72Q9NP77 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC6.15□□□□□ -1.42
SSU72Q9NP77 AC097486.1-201ENST00000515331 210 ntBASIC6.15□□□□□ -1.42
SSU72Q9NP77 SCARNA11.1-201ENST00000516918 132 ntBASIC6.15□□□□□ -1.42
SSU72Q9NP77 TPT1-AS1-213ENST00000521336 759 ntTSL 5 BASIC6.15□□□□□ -1.42
SSU72Q9NP77 BAALC-AS1-208ENST00000523614 582 ntTSL 5 BASIC6.15□□□□□ -1.42
SSU72Q9NP77 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC6.15□□□□□ -1.42
SSU72Q9NP77 KC877392.1-201ENST00000524855 426 ntTSL 3 BASIC6.15□□□□□ -1.42
SSU72Q9NP77 NF1P12-201ENST00000549593 583 ntBASIC6.15□□□□□ -1.42
SSU72Q9NP77 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC6.15□□□□□ -1.42
SSU72Q9NP77 MIR4312-201ENST00000579909 76 ntBASIC6.15□□□□□ -1.42
SSU72Q9NP77 RN7SL475P-201ENST00000583379 298 ntBASIC6.15□□□□□ -1.42
SSU72Q9NP77 RPS4XP16-202ENST00000595905 807 ntTSL 5 BASIC6.15□□□□□ -1.42
SSU72Q9NP77 AC010139.1-201ENST00000596963 445 ntTSL 5 BASIC6.15□□□□□ -1.42
SSU72Q9NP77 AP001429.1-201ENST00000602568 530 ntBASIC6.15□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms