Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC4.06□□□□□ -1.76
CHD8Q9HCK8 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CHD8Q9HCK8 OSBPL9P1-201ENST00000604744 1469 ntBASIC4.06□□□□□ -1.76
CHD8Q9HCK8 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CHD8Q9HCK8 AL031119.1-201ENST00000404707 1879 ntBASIC4.06□□□□□ -1.76
CHD8Q9HCK8 RNU6ATAC3P-201ENST00000387974 126 ntBASIC4.06□□□□□ -1.76
CHD8Q9HCK8 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC4.06□□□□□ -1.76
CHD8Q9HCK8 COX6B1P7-201ENST00000430845 235 ntBASIC4.06□□□□□ -1.76
CHD8Q9HCK8 FABP5P2-201ENST00000439042 408 ntBASIC4.06□□□□□ -1.76
CHD8Q9HCK8 AC024451.1-201ENST00000508013 779 ntBASIC4.06□□□□□ -1.76
CHD8Q9HCK8 AC093853.1-201ENST00000515689 483 ntBASIC4.06□□□□□ -1.76
CHD8Q9HCK8 AL049830.4-201ENST00000555149 351 ntBASIC4.06□□□□□ -1.76
CHD8Q9HCK8 CFL2-206ENST00000556161 546 ntTSL 4 BASIC4.06□□□□□ -1.76
CHD8Q9HCK8 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.06□□□□□ -1.76
CHD8Q9HCK8 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC4.06□□□□□ -1.76
CHD8Q9HCK8 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CHD8Q9HCK8 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CHD8Q9HCK8 CPHL1P-201ENST00000461341 3407 ntBASIC4.06□□□□□ -1.76
CHD8Q9HCK8 AC099654.3-201ENST00000447087 1546 ntBASIC4.06□□□□□ -1.76
CHD8Q9HCK8 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.06□□□□□ -1.76
CHD8Q9HCK8 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CHD8Q9HCK8 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CHD8Q9HCK8 AC008065.1-201ENST00000428525 348 ntBASIC4.06□□□□□ -1.76
CHD8Q9HCK8 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.06□□□□□ -1.76
CHD8Q9HCK8 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.06□□□□□ -1.76
CHD8Q9HCK8 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC4.06□□□□□ -1.76
CHD8Q9HCK8 AC112206.1-201ENST00000468416 477 ntBASIC4.06□□□□□ -1.76
CHD8Q9HCK8 RNU6-352P-201ENST00000516908 107 ntBASIC4.06□□□□□ -1.76
CHD8Q9HCK8 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CHD8Q9HCK8 AP001804.1-201ENST00000526868 919 ntBASIC4.06□□□□□ -1.76
CHD8Q9HCK8 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CHD8Q9HCK8 DYNLL1P4-201ENST00000549314 266 ntBASIC4.06□□□□□ -1.76
CHD8Q9HCK8 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC4.06□□□□□ -1.76
CHD8Q9HCK8 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC4.06□□□□□ -1.76
CHD8Q9HCK8 MIR4672-201ENST00000583126 81 ntBASIC4.06□□□□□ -1.76
CHD8Q9HCK8 AC025175.1-201ENST00000606482 759 ntBASIC4.06□□□□□ -1.76
CHD8Q9HCK8 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC4.06□□□□□ -1.76
CHD8Q9HCK8 AC008833.1-201ENST00000611633 691 ntBASIC4.06□□□□□ -1.76
CHD8Q9HCK8 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.05□□□□□ -1.76
CHD8Q9HCK8 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC4.05□□□□□ -1.76
CHD8Q9HCK8 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
CHD8Q9HCK8 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CHD8Q9HCK8 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CHD8Q9HCK8 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC4.05□□□□□ -1.76
CHD8Q9HCK8 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.05□□□□□ -1.76
CHD8Q9HCK8 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
CHD8Q9HCK8 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
CHD8Q9HCK8 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC4.05□□□□□ -1.76
CHD8Q9HCK8 RNU6-213P-201ENST00000384051 104 ntBASIC4.05□□□□□ -1.76
CHD8Q9HCK8 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.05□□□□□ -1.76
CHD8Q9HCK8 AC245052.5-201ENST00000416320 649 ntBASIC4.05□□□□□ -1.76
CHD8Q9HCK8 AL159987.2-201ENST00000432754 307 ntBASIC4.05□□□□□ -1.76
CHD8Q9HCK8 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC4.05□□□□□ -1.76
CHD8Q9HCK8 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4.05□□□□□ -1.76
CHD8Q9HCK8 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.05□□□□□ -1.76
CHD8Q9HCK8 AC087477.6-201ENST00000559595 843 ntBASIC4.05□□□□□ -1.76
CHD8Q9HCK8 AL590240.3-201ENST00000621416 943 ntBASIC4.05□□□□□ -1.76
CHD8Q9HCK8 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC4.05□□□□□ -1.76
CHD8Q9HCK8 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
CHD8Q9HCK8 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC4.05□□□□□ -1.76
CHD8Q9HCK8 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
CHD8Q9HCK8 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.05□□□□□ -1.76
CHD8Q9HCK8 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CHD8Q9HCK8 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CHD8Q9HCK8 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CHD8Q9HCK8 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
CHD8Q9HCK8 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC4.05□□□□□ -1.76
CHD8Q9HCK8 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC4.05□□□□□ -1.76
CHD8Q9HCK8 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC4.05□□□□□ -1.76
CHD8Q9HCK8 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC4.05□□□□□ -1.76
CHD8Q9HCK8 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC4.05□□□□□ -1.76
CHD8Q9HCK8 COX6CP13-201ENST00000428703 226 ntBASIC4.05□□□□□ -1.76
CHD8Q9HCK8 RPL5P12-201ENST00000477071 851 ntBASIC4.05□□□□□ -1.76
CHD8Q9HCK8 RNU1-95P-201ENST00000516357 160 ntBASIC4.05□□□□□ -1.76
CHD8Q9HCK8 RNU1-128P-201ENST00000516704 160 ntBASIC4.05□□□□□ -1.76
CHD8Q9HCK8 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC4.05□□□□□ -1.76
CHD8Q9HCK8 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.05□□□□□ -1.76
CHD8Q9HCK8 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC4.05□□□□□ -1.76
CHD8Q9HCK8 AC022884.2-201ENST00000578535 580 ntBASIC4.05□□□□□ -1.76
CHD8Q9HCK8 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC4.05□□□□□ -1.76
CHD8Q9HCK8 TUG1_1.1-201ENST00000610654 145 ntBASIC4.05□□□□□ -1.76
CHD8Q9HCK8 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
CHD8Q9HCK8 AL133243.3-201ENST00000617415 3004 ntBASIC4.04□□□□□ -1.76
CHD8Q9HCK8 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CHD8Q9HCK8 ERCC6-202ENST00000374127 1782 ntBASIC4.04□□□□□ -1.76
CHD8Q9HCK8 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
CHD8Q9HCK8 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CHD8Q9HCK8 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CHD8Q9HCK8 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CHD8Q9HCK8 AL590609.2-201ENST00000421430 368 ntBASIC4.04□□□□□ -1.76
CHD8Q9HCK8 WAC-209ENST00000428935 1320 ntTSL 2 BASIC4.04□□□□□ -1.76
CHD8Q9HCK8 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC4.04□□□□□ -1.76
CHD8Q9HCK8 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.04□□□□□ -1.76
CHD8Q9HCK8 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC4.04□□□□□ -1.76
CHD8Q9HCK8 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CHD8Q9HCK8 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CHD8Q9HCK8 AC104763.2-201ENST00000604179 382 ntBASIC4.04□□□□□ -1.76
CHD8Q9HCK8 AC006453.5-201ENST00000636451 619 ntBASIC4.04□□□□□ -1.76
CHD8Q9HCK8 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CHD8Q9HCK8 AC107068.1-201ENST00000563286 4218 ntBASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms