Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
USP29Q9HBJ7 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
USP29Q9HBJ7 UBE2Q2P1-202ENST00000354771 883 ntBASIC5.3□□□□□ -1.56
USP29Q9HBJ7 SNORA17.1-201ENST00000362945 126 ntBASIC5.3□□□□□ -1.56
USP29Q9HBJ7 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
USP29Q9HBJ7 UBBP2-201ENST00000376781 231 ntBASIC5.3□□□□□ -1.56
USP29Q9HBJ7 SNORD65C-201ENST00000390962 71 ntBASIC5.3□□□□□ -1.56
USP29Q9HBJ7 AL049545.1-201ENST00000401856 572 ntBASIC5.3□□□□□ -1.56
USP29Q9HBJ7 AL390316.1-201ENST00000406279 553 ntBASIC5.3□□□□□ -1.56
USP29Q9HBJ7 MIR1182-201ENST00000408363 97 ntBASIC5.3□□□□□ -1.56
USP29Q9HBJ7 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC5.3□□□□□ -1.56
USP29Q9HBJ7 MTND4P3-201ENST00000417829 541 ntBASIC5.3□□□□□ -1.56
USP29Q9HBJ7 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC5.3□□□□□ -1.56
USP29Q9HBJ7 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC5.3□□□□□ -1.56
USP29Q9HBJ7 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC5.3□□□□□ -1.56
USP29Q9HBJ7 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC5.3□□□□□ -1.56
USP29Q9HBJ7 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC5.3□□□□□ -1.56
USP29Q9HBJ7 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC5.3□□□□□ -1.56
USP29Q9HBJ7 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC5.3□□□□□ -1.56
USP29Q9HBJ7 AC004263.1-201ENST00000479327 332 ntBASIC5.3□□□□□ -1.56
USP29Q9HBJ7 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
USP29Q9HBJ7 RN7SL808P-201ENST00000496066 299 ntBASIC5.3□□□□□ -1.56
USP29Q9HBJ7 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC5.3□□□□□ -1.56
USP29Q9HBJ7 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC5.3□□□□□ -1.56
USP29Q9HBJ7 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC5.3□□□□□ -1.56
USP29Q9HBJ7 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC5.3□□□□□ -1.56
USP29Q9HBJ7 AC012400.1-201ENST00000518452 381 ntBASIC5.3□□□□□ -1.56
USP29Q9HBJ7 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC5.3□□□□□ -1.56
USP29Q9HBJ7 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC5.3□□□□□ -1.56
USP29Q9HBJ7 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.3□□□□□ -1.56
USP29Q9HBJ7 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC5.3□□□□□ -1.56
USP29Q9HBJ7 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC5.3□□□□□ -1.56
USP29Q9HBJ7 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC5.3□□□□□ -1.56
USP29Q9HBJ7 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC5.3□□□□□ -1.56
USP29Q9HBJ7 AC006272.2-201ENST00000594725 163 ntBASIC5.3□□□□□ -1.56
USP29Q9HBJ7 AC005377.1-201ENST00000605126 456 ntBASIC5.3□□□□□ -1.56
USP29Q9HBJ7 AC018695.5-201ENST00000605872 315 ntBASIC5.3□□□□□ -1.56
USP29Q9HBJ7 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC5.3□□□□□ -1.56
USP29Q9HBJ7 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC5.3□□□□□ -1.56
USP29Q9HBJ7 FRG1HP-204ENST00000617940 757 ntBASIC5.3□□□□□ -1.56
USP29Q9HBJ7 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
USP29Q9HBJ7 AC011815.3-201ENST00000624194 473 ntBASIC5.3□□□□□ -1.56
USP29Q9HBJ7 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC5.3□□□□□ -1.56
USP29Q9HBJ7 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC5.3□□□□□ -1.56
USP29Q9HBJ7 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
USP29Q9HBJ7 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.3□□□□□ -1.56
USP29Q9HBJ7 AC073869.10-201ENST00000642016 354 ntBASIC5.3□□□□□ -1.56
USP29Q9HBJ7 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.3□□□□□ -1.56
USP29Q9HBJ7 AC000374.1-201ENST00000434698 1745 ntBASIC5.3□□□□□ -1.56
USP29Q9HBJ7 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
USP29Q9HBJ7 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
USP29Q9HBJ7 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.3□□□□□ -1.56
USP29Q9HBJ7 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
USP29Q9HBJ7 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC5.3□□□□□ -1.56
USP29Q9HBJ7 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.3□□□□□ -1.56
USP29Q9HBJ7 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC5.3□□□□□ -1.56
USP29Q9HBJ7 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
USP29Q9HBJ7 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.29□□□□□ -1.56
USP29Q9HBJ7 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
USP29Q9HBJ7 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.29□□□□□ -1.56
USP29Q9HBJ7 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC5.29□□□□□ -1.56
USP29Q9HBJ7 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
USP29Q9HBJ7 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
USP29Q9HBJ7 U3.2-201ENST00000362981 210 ntBASIC5.29□□□□□ -1.56
USP29Q9HBJ7 RNU4-68P-201ENST00000364314 141 ntBASIC5.29□□□□□ -1.56
USP29Q9HBJ7 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC5.29□□□□□ -1.56
USP29Q9HBJ7 MIR585-201ENST00000384887 94 ntBASIC5.29□□□□□ -1.56
USP29Q9HBJ7 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
USP29Q9HBJ7 RPL37P18-201ENST00000411602 243 ntBASIC5.29□□□□□ -1.56
USP29Q9HBJ7 AL139128.1-201ENST00000413921 941 ntBASIC5.29□□□□□ -1.56
USP29Q9HBJ7 RBMY2KP-201ENST00000418221 992 ntBASIC5.29□□□□□ -1.56
USP29Q9HBJ7 MTCO3P4-201ENST00000419236 787 ntBASIC5.29□□□□□ -1.56
USP29Q9HBJ7 AL513175.2-201ENST00000422071 443 ntBASIC5.29□□□□□ -1.56
USP29Q9HBJ7 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC5.29□□□□□ -1.56
USP29Q9HBJ7 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC5.29□□□□□ -1.56
USP29Q9HBJ7 AC010099.3-201ENST00000423896 409 ntBASIC5.29□□□□□ -1.56
USP29Q9HBJ7 HNRNPA3P4-201ENST00000427514 803 ntBASIC5.29□□□□□ -1.56
USP29Q9HBJ7 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.29□□□□□ -1.56
USP29Q9HBJ7 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.29□□□□□ -1.56
USP29Q9HBJ7 RPS29P10-201ENST00000439197 166 ntBASIC5.29□□□□□ -1.56
USP29Q9HBJ7 AC073052.1-201ENST00000440417 714 ntBASIC5.29□□□□□ -1.56
USP29Q9HBJ7 AC097499.1-201ENST00000444277 208 ntBASIC5.29□□□□□ -1.56
USP29Q9HBJ7 MTND2P22-201ENST00000444325 1033 ntBASIC5.29□□□□□ -1.56
USP29Q9HBJ7 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC5.29□□□□□ -1.56
USP29Q9HBJ7 AL122001.1-201ENST00000457027 370 ntBASIC5.29□□□□□ -1.56
USP29Q9HBJ7 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.29□□□□□ -1.56
USP29Q9HBJ7 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.29□□□□□ -1.56
USP29Q9HBJ7 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC5.29□□□□□ -1.56
USP29Q9HBJ7 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC5.29□□□□□ -1.56
USP29Q9HBJ7 AC104417.1-201ENST00000523974 751 ntBASIC5.29□□□□□ -1.56
USP29Q9HBJ7 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
USP29Q9HBJ7 LRRC6P1-201ENST00000532188 885 ntBASIC5.29□□□□□ -1.56
USP29Q9HBJ7 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC5.29□□□□□ -1.56
USP29Q9HBJ7 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
USP29Q9HBJ7 CASP1-216ENST00000534497 825 ntTSL 5 BASIC5.29□□□□□ -1.56
USP29Q9HBJ7 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.29□□□□□ -1.56
USP29Q9HBJ7 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC5.29□□□□□ -1.56
USP29Q9HBJ7 AC006349.1-201ENST00000555526 235 ntBASIC5.29□□□□□ -1.56
USP29Q9HBJ7 MTND4P33-201ENST00000556706 766 ntBASIC5.29□□□□□ -1.56
USP29Q9HBJ7 MIR3691-201ENST00000578066 90 ntBASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms