Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 ARPC3P2-201ENST00000457786 533 ntBASIC5.37□□□□□ -1.55
SEC61A2Q9H9S3 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5.37□□□□□ -1.55
SEC61A2Q9H9S3 GAPDHP39-201ENST00000481866 979 ntBASIC5.37□□□□□ -1.55
SEC61A2Q9H9S3 AC073522.1-201ENST00000483312 377 ntBASIC5.37□□□□□ -1.55
SEC61A2Q9H9S3 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.37□□□□□ -1.55
SEC61A2Q9H9S3 RPL23AP40-201ENST00000487630 390 ntBASIC5.37□□□□□ -1.55
SEC61A2Q9H9S3 AC108941.1-201ENST00000502853 530 ntBASIC5.37□□□□□ -1.55
SEC61A2Q9H9S3 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC5.37□□□□□ -1.55
SEC61A2Q9H9S3 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC5.37□□□□□ -1.55
SEC61A2Q9H9S3 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC5.37□□□□□ -1.55
SEC61A2Q9H9S3 SETP21-201ENST00000514799 892 ntBASIC5.37□□□□□ -1.55
SEC61A2Q9H9S3 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC5.37□□□□□ -1.55
SEC61A2Q9H9S3 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
SEC61A2Q9H9S3 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC5.37□□□□□ -1.55
SEC61A2Q9H9S3 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC5.37□□□□□ -1.55
SEC61A2Q9H9S3 BICD1-206ENST00000551086 423 ntTSL 3 BASIC5.37□□□□□ -1.55
SEC61A2Q9H9S3 AC124947.2-202ENST00000552735 133 ntBASIC5.37□□□□□ -1.55
SEC61A2Q9H9S3 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC5.37□□□□□ -1.55
SEC61A2Q9H9S3 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SEC61A2Q9H9S3 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC5.37□□□□□ -1.55
SEC61A2Q9H9S3 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC5.37□□□□□ -1.55
SEC61A2Q9H9S3 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC5.37□□□□□ -1.55
SEC61A2Q9H9S3 AC026826.3-201ENST00000561747 158 ntBASIC5.37□□□□□ -1.55
SEC61A2Q9H9S3 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC5.37□□□□□ -1.55
SEC61A2Q9H9S3 EIF5A2P1-201ENST00000564027 460 ntBASIC5.37□□□□□ -1.55
SEC61A2Q9H9S3 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC5.37□□□□□ -1.55
SEC61A2Q9H9S3 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC5.37□□□□□ -1.55
SEC61A2Q9H9S3 FAM106CP-201ENST00000582212 507 ntBASIC5.37□□□□□ -1.55
SEC61A2Q9H9S3 MIR4271-201ENST00000582451 67 ntBASIC5.37□□□□□ -1.55
SEC61A2Q9H9S3 AP000907.4-201ENST00000604143 237 ntBASIC5.37□□□□□ -1.55
SEC61A2Q9H9S3 AC092954.2-201ENST00000609103 430 ntBASIC5.37□□□□□ -1.55
SEC61A2Q9H9S3 AL445670.1-201ENST00000618889 801 ntBASIC5.37□□□□□ -1.55
SEC61A2Q9H9S3 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC5.37□□□□□ -1.55
SEC61A2Q9H9S3 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC5.37□□□□□ -1.55
SEC61A2Q9H9S3 U6.107-201ENST00000637108 79 ntBASIC5.37□□□□□ -1.55
SEC61A2Q9H9S3 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC5.37□□□□□ -1.55
SEC61A2Q9H9S3 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.37□□□□□ -1.55
SEC61A2Q9H9S3 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.37□□□□□ -1.55
SEC61A2Q9H9S3 ING3-204ENST00000431467 1447 ntTSL 2 BASIC5.37□□□□□ -1.55
SEC61A2Q9H9S3 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.37□□□□□ -1.55
SEC61A2Q9H9S3 AC104966.1-201ENST00000467010 1464 ntBASIC5.37□□□□□ -1.55
SEC61A2Q9H9S3 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SEC61A2Q9H9S3 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.37□□□□□ -1.55
SEC61A2Q9H9S3 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SEC61A2Q9H9S3 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SEC61A2Q9H9S3 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.36□□□□□ -1.55
SEC61A2Q9H9S3 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
SEC61A2Q9H9S3 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC5.36□□□□□ -1.55
SEC61A2Q9H9S3 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.36□□□□□ -1.55
SEC61A2Q9H9S3 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.36□□□□□ -1.55
SEC61A2Q9H9S3 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SEC61A2Q9H9S3 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC5.36□□□□□ -1.55
SEC61A2Q9H9S3 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
SEC61A2Q9H9S3 RNU1-134P-201ENST00000362935 165 ntBASIC5.36□□□□□ -1.55
SEC61A2Q9H9S3 RNU105B-201ENST00000364478 208 ntBASIC5.36□□□□□ -1.55
SEC61A2Q9H9S3 RNU6-621P-201ENST00000364752 109 ntBASIC5.36□□□□□ -1.55
SEC61A2Q9H9S3 RNU6-1011P-201ENST00000384668 107 ntBASIC5.36□□□□□ -1.55
SEC61A2Q9H9S3 MIR181A1-201ENST00000385026 110 ntBASIC5.36□□□□□ -1.55
SEC61A2Q9H9S3 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SEC61A2Q9H9S3 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SEC61A2Q9H9S3 RN7SKP59-201ENST00000410520 314 ntBASIC5.36□□□□□ -1.55
SEC61A2Q9H9S3 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC5.36□□□□□ -1.55
SEC61A2Q9H9S3 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC5.36□□□□□ -1.55
SEC61A2Q9H9S3 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC5.36□□□□□ -1.55
SEC61A2Q9H9S3 OR51A5P-201ENST00000415429 942 ntBASIC5.36□□□□□ -1.55
SEC61A2Q9H9S3 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC5.36□□□□□ -1.55
SEC61A2Q9H9S3 RPS15AP30-201ENST00000420976 390 ntBASIC5.36□□□□□ -1.55
SEC61A2Q9H9S3 RPL12P12-201ENST00000424633 501 ntBASIC5.36□□□□□ -1.55
SEC61A2Q9H9S3 TRIM60P10Y-201ENST00000425589 751 ntBASIC5.36□□□□□ -1.55
SEC61A2Q9H9S3 AC115283.1-201ENST00000427353 400 ntBASIC5.36□□□□□ -1.55
SEC61A2Q9H9S3 AC002069.1-201ENST00000429649 1159 ntBASIC5.36□□□□□ -1.55
SEC61A2Q9H9S3 TRIM60P3Y-201ENST00000432201 673 ntBASIC5.36□□□□□ -1.55
SEC61A2Q9H9S3 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC5.36□□□□□ -1.55
SEC61A2Q9H9S3 TRIM60P8Y-201ENST00000436338 762 ntBASIC5.36□□□□□ -1.55
SEC61A2Q9H9S3 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC5.36□□□□□ -1.55
SEC61A2Q9H9S3 AL118496.2-201ENST00000448300 230 ntBASIC5.36□□□□□ -1.55
SEC61A2Q9H9S3 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC5.36□□□□□ -1.55
SEC61A2Q9H9S3 AL162739.1-201ENST00000450606 307 ntBASIC5.36□□□□□ -1.55
SEC61A2Q9H9S3 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC5.36□□□□□ -1.55
SEC61A2Q9H9S3 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC5.36□□□□□ -1.55
SEC61A2Q9H9S3 PNPLA4P1-201ENST00000458328 305 ntBASIC5.36□□□□□ -1.55
SEC61A2Q9H9S3 ACA64.4-201ENST00000459070 127 ntBASIC5.36□□□□□ -1.55
SEC61A2Q9H9S3 KLF3P2-201ENST00000465138 268 ntBASIC5.36□□□□□ -1.55
SEC61A2Q9H9S3 ACTG1P13-201ENST00000486987 1043 ntBASIC5.36□□□□□ -1.55
SEC61A2Q9H9S3 AL035690.1-201ENST00000490892 383 ntBASIC5.36□□□□□ -1.55
SEC61A2Q9H9S3 AC083795.1-201ENST00000491760 320 ntBASIC5.36□□□□□ -1.55
SEC61A2Q9H9S3 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC5.36□□□□□ -1.55
SEC61A2Q9H9S3 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC5.36□□□□□ -1.55
SEC61A2Q9H9S3 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC5.36□□□□□ -1.55
SEC61A2Q9H9S3 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC5.36□□□□□ -1.55
SEC61A2Q9H9S3 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC5.36□□□□□ -1.55
SEC61A2Q9H9S3 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC5.36□□□□□ -1.55
SEC61A2Q9H9S3 ARL2BPP6-201ENST00000512757 439 ntBASIC5.36□□□□□ -1.55
SEC61A2Q9H9S3 RPL7L1P4-201ENST00000513004 707 ntBASIC5.36□□□□□ -1.55
SEC61A2Q9H9S3 AC097486.1-201ENST00000515331 210 ntBASIC5.36□□□□□ -1.55
SEC61A2Q9H9S3 CDC42P3-201ENST00000518493 633 ntBASIC5.36□□□□□ -1.55
SEC61A2Q9H9S3 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC5.36□□□□□ -1.55
SEC61A2Q9H9S3 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC5.36□□□□□ -1.55
SEC61A2Q9H9S3 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.36□□□□□ -1.55
SEC61A2Q9H9S3 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 137.4 ms