Protein–RNA interactions for Protein: Q9BY43

CHMP4A, Charged multivesicular body protein 4a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4AQ9BY43 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
CHMP4AQ9BY43 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CHMP4AQ9BY43 AC007738.1-201ENST00000413892 348 ntBASIC6.44□□□□□ -1.38
CHMP4AQ9BY43 AC079809.1-201ENST00000415468 276 ntBASIC6.44□□□□□ -1.38
CHMP4AQ9BY43 RPL31P45-201ENST00000419532 356 ntBASIC6.44□□□□□ -1.38
CHMP4AQ9BY43 PNRC2P1-201ENST00000423940 420 ntBASIC6.44□□□□□ -1.38
CHMP4AQ9BY43 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC6.44□□□□□ -1.38
CHMP4AQ9BY43 NPM1P34-201ENST00000428821 893 ntBASIC6.44□□□□□ -1.38
CHMP4AQ9BY43 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC6.44□□□□□ -1.38
CHMP4AQ9BY43 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC6.44□□□□□ -1.38
CHMP4AQ9BY43 AL772161.1-201ENST00000439130 476 ntBASIC6.44□□□□□ -1.38
CHMP4AQ9BY43 RPL12P3-201ENST00000440080 396 ntBASIC6.44□□□□□ -1.38
CHMP4AQ9BY43 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC6.44□□□□□ -1.38
CHMP4AQ9BY43 AC108161.1-201ENST00000461060 402 ntBASIC6.44□□□□□ -1.38
CHMP4AQ9BY43 RN7SL826P-201ENST00000479724 288 ntBASIC6.44□□□□□ -1.38
CHMP4AQ9BY43 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC6.44□□□□□ -1.38
CHMP4AQ9BY43 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC6.44□□□□□ -1.38
CHMP4AQ9BY43 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC6.44□□□□□ -1.38
CHMP4AQ9BY43 GAPDHP56-201ENST00000506031 988 ntBASIC6.44□□□□□ -1.38
CHMP4AQ9BY43 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
CHMP4AQ9BY43 BGLT3-201ENST00000564523 994 ntBASIC6.44□□□□□ -1.38
CHMP4AQ9BY43 AC027216.1-201ENST00000577726 685 ntBASIC6.44□□□□□ -1.38
CHMP4AQ9BY43 AC011840.5-201ENST00000582125 771 ntBASIC6.44□□□□□ -1.38
CHMP4AQ9BY43 UBA2-208ENST00000592791 910 ntTSL 2 BASIC6.44□□□□□ -1.38
CHMP4AQ9BY43 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC6.44□□□□□ -1.38
CHMP4AQ9BY43 AC090510.2-201ENST00000617465 629 ntBASIC6.44□□□□□ -1.38
CHMP4AQ9BY43 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC6.44□□□□□ -1.38
CHMP4AQ9BY43 AL023881.1-201ENST00000621088 301 ntBASIC6.44□□□□□ -1.38
CHMP4AQ9BY43 AC067852.7-201ENST00000623270 535 ntBASIC6.44□□□□□ -1.38
CHMP4AQ9BY43 AC018529.3-201ENST00000624212 2254 ntBASIC6.44□□□□□ -1.38
CHMP4AQ9BY43 AL672167.1-205ENST00000641112 3080 ntBASIC6.44□□□□□ -1.38
CHMP4AQ9BY43 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
CHMP4AQ9BY43 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC6.44□□□□□ -1.38
CHMP4AQ9BY43 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CHMP4AQ9BY43 XPOTP1-201ENST00000443317 2398 ntBASIC6.44□□□□□ -1.38
CHMP4AQ9BY43 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CHMP4AQ9BY43 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC6.44□□□□□ -1.38
CHMP4AQ9BY43 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC6.44□□□□□ -1.38
CHMP4AQ9BY43 ECM1P2-201ENST00000503354 1577 ntBASIC6.44□□□□□ -1.38
CHMP4AQ9BY43 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CHMP4AQ9BY43 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CHMP4AQ9BY43 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC6.44□□□□□ -1.38
CHMP4AQ9BY43 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
CHMP4AQ9BY43 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
CHMP4AQ9BY43 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CHMP4AQ9BY43 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC6.43□□□□□ -1.38
CHMP4AQ9BY43 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
CHMP4AQ9BY43 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC6.43□□□□□ -1.38
CHMP4AQ9BY43 AP001029.2-203ENST00000589795 4910 ntBASIC6.43□□□□□ -1.38
CHMP4AQ9BY43 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC6.43□□□□□ -1.38
CHMP4AQ9BY43 CHEK2P3-201ENST00000416118 248 ntBASIC6.43□□□□□ -1.38
CHMP4AQ9BY43 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CHMP4AQ9BY43 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC6.43□□□□□ -1.38
CHMP4AQ9BY43 AL691517.1-201ENST00000440833 1235 ntBASIC6.43□□□□□ -1.38
CHMP4AQ9BY43 RPL34P20-201ENST00000442771 351 ntBASIC6.43□□□□□ -1.38
CHMP4AQ9BY43 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC6.43□□□□□ -1.38
CHMP4AQ9BY43 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC6.43□□□□□ -1.38
CHMP4AQ9BY43 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC6.43□□□□□ -1.38
CHMP4AQ9BY43 SSR3-206ENST00000476217 807 ntTSL 3 BASIC6.43□□□□□ -1.38
CHMP4AQ9BY43 RPL7P16-201ENST00000479738 738 ntBASIC6.43□□□□□ -1.38
CHMP4AQ9BY43 AC026688.1-201ENST00000520639 1168 ntBASIC6.43□□□□□ -1.38
CHMP4AQ9BY43 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC6.43□□□□□ -1.38
CHMP4AQ9BY43 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC6.43□□□□□ -1.38
CHMP4AQ9BY43 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC6.43□□□□□ -1.38
CHMP4AQ9BY43 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC6.43□□□□□ -1.38
CHMP4AQ9BY43 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC6.43□□□□□ -1.38
CHMP4AQ9BY43 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC6.43□□□□□ -1.38
CHMP4AQ9BY43 AP005119.2-201ENST00000579735 1105 ntBASIC6.43□□□□□ -1.38
CHMP4AQ9BY43 PRPF19P1-201ENST00000584766 898 ntBASIC6.43□□□□□ -1.38
CHMP4AQ9BY43 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC6.43□□□□□ -1.38
CHMP4AQ9BY43 MEMO1P5-201ENST00000604810 406 ntBASIC6.43□□□□□ -1.38
CHMP4AQ9BY43 AC005377.1-201ENST00000605126 456 ntBASIC6.43□□□□□ -1.38
CHMP4AQ9BY43 AC105429.2-201ENST00000610567 517 ntBASIC6.43□□□□□ -1.38
CHMP4AQ9BY43 AC234782.5-201ENST00000617723 324 ntBASIC6.43□□□□□ -1.38
CHMP4AQ9BY43 PDCD6IPP1-202ENST00000622242 1064 ntBASIC6.43□□□□□ -1.38
CHMP4AQ9BY43 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC6.43□□□□□ -1.38
CHMP4AQ9BY43 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
CHMP4AQ9BY43 AC112198.2-201ENST00000426589 6996 ntBASIC6.43□□□□□ -1.38
CHMP4AQ9BY43 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC6.43□□□□□ -1.38
CHMP4AQ9BY43 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
CHMP4AQ9BY43 AC011978.2-201ENST00000569835 2054 ntBASIC6.43□□□□□ -1.38
CHMP4AQ9BY43 AC083899.2-201ENST00000423285 1376 ntBASIC6.43□□□□□ -1.38
CHMP4AQ9BY43 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CHMP4AQ9BY43 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC6.43□□□□□ -1.38
CHMP4AQ9BY43 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC6.43□□□□□ -1.38
CHMP4AQ9BY43 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CHMP4AQ9BY43 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CHMP4AQ9BY43 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC6.42□□□□□ -1.38
CHMP4AQ9BY43 RN7SKP95-201ENST00000362860 303 ntBASIC6.42□□□□□ -1.38
CHMP4AQ9BY43 RN7SKP149-201ENST00000363008 344 ntBASIC6.42□□□□□ -1.38
CHMP4AQ9BY43 RPL21P67-201ENST00000402896 478 ntBASIC6.42□□□□□ -1.38
CHMP4AQ9BY43 RPL12P9-201ENST00000412942 488 ntBASIC6.42□□□□□ -1.38
CHMP4AQ9BY43 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC6.42□□□□□ -1.38
CHMP4AQ9BY43 COX6B1P1-201ENST00000415962 213 ntBASIC6.42□□□□□ -1.38
CHMP4AQ9BY43 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC6.42□□□□□ -1.38
CHMP4AQ9BY43 AC073310.1-201ENST00000423226 1033 ntBASIC6.42□□□□□ -1.38
CHMP4AQ9BY43 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
CHMP4AQ9BY43 PSMD10P3-201ENST00000437000 448 ntBASIC6.42□□□□□ -1.38
CHMP4AQ9BY43 MTCO3P43-201ENST00000440974 771 ntBASIC6.42□□□□□ -1.38
CHMP4AQ9BY43 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms