Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 EI24P3-201ENST00000399046 1062 ntBASIC6.48□□□□□ -1.37
SCAPERQ9BY12 AL359643.1-201ENST00000404109 423 ntBASIC6.48□□□□□ -1.37
SCAPERQ9BY12 Z74021.1-201ENST00000423610 407 ntBASIC6.48□□□□□ -1.37
SCAPERQ9BY12 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC6.48□□□□□ -1.37
SCAPERQ9BY12 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC6.48□□□□□ -1.37
SCAPERQ9BY12 AC012123.2-201ENST00000485809 248 ntBASIC6.48□□□□□ -1.37
SCAPERQ9BY12 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC6.48□□□□□ -1.37
SCAPERQ9BY12 RN7SKP157-201ENST00000516174 282 ntBASIC6.48□□□□□ -1.37
SCAPERQ9BY12 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC6.48□□□□□ -1.37
SCAPERQ9BY12 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC6.48□□□□□ -1.37
SCAPERQ9BY12 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC6.48□□□□□ -1.37
SCAPERQ9BY12 BNIP3P41-202ENST00000616656 861 ntBASIC6.48□□□□□ -1.37
SCAPERQ9BY12 MIR6500-201ENST00000622700 86 ntBASIC6.48□□□□□ -1.37
SCAPERQ9BY12 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
SCAPERQ9BY12 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SCAPERQ9BY12 NXPH1-205ENST00000602349 1953 ntBASIC6.48□□□□□ -1.37
SCAPERQ9BY12 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC6.47□□□□□ -1.37
SCAPERQ9BY12 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
SCAPERQ9BY12 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SCAPERQ9BY12 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC6.47□□□□□ -1.37
SCAPERQ9BY12 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SCAPERQ9BY12 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
SCAPERQ9BY12 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SCAPERQ9BY12 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SCAPERQ9BY12 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC6.47□□□□□ -1.37
SCAPERQ9BY12 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC6.47□□□□□ -1.37
SCAPERQ9BY12 OR11H4-201ENST00000315409 1082 ntBASIC6.47□□□□□ -1.37
SCAPERQ9BY12 RNA5SP151-201ENST00000365632 117 ntBASIC6.47□□□□□ -1.37
SCAPERQ9BY12 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
SCAPERQ9BY12 RAB9AP3-201ENST00000412737 573 ntBASIC6.47□□□□□ -1.37
SCAPERQ9BY12 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC6.47□□□□□ -1.37
SCAPERQ9BY12 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SCAPERQ9BY12 NOTCH2P1-201ENST00000443481 624 ntBASIC6.47□□□□□ -1.37
SCAPERQ9BY12 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC6.47□□□□□ -1.37
SCAPERQ9BY12 RAB9AP1-201ENST00000449393 573 ntBASIC6.47□□□□□ -1.37
SCAPERQ9BY12 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC6.47□□□□□ -1.37
SCAPERQ9BY12 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC6.47□□□□□ -1.37
SCAPERQ9BY12 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC6.47□□□□□ -1.37
SCAPERQ9BY12 RAD21-204ENST00000518055 896 ntTSL 2 BASIC6.47□□□□□ -1.37
SCAPERQ9BY12 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC6.47□□□□□ -1.37
SCAPERQ9BY12 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC6.47□□□□□ -1.37
SCAPERQ9BY12 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC6.47□□□□□ -1.37
SCAPERQ9BY12 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
SCAPERQ9BY12 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC6.47□□□□□ -1.37
SCAPERQ9BY12 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC6.47□□□□□ -1.37
SCAPERQ9BY12 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SCAPERQ9BY12 ARHGAP42P1-201ENST00000507474 1976 ntBASIC6.46□□□□□ -1.37
SCAPERQ9BY12 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC6.46□□□□□ -1.37
SCAPERQ9BY12 SNORA74C-2-201ENST00000411179 201 ntBASIC6.46□□□□□ -1.38
SCAPERQ9BY12 AL356968.2-201ENST00000412769 1257 ntBASIC6.46□□□□□ -1.38
SCAPERQ9BY12 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC6.46□□□□□ -1.38
SCAPERQ9BY12 GNG5P5-201ENST00000420444 220 ntBASIC6.46□□□□□ -1.38
SCAPERQ9BY12 NMNAT1P2-201ENST00000435192 860 ntBASIC6.46□□□□□ -1.38
SCAPERQ9BY12 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC6.46□□□□□ -1.38
SCAPERQ9BY12 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC6.46□□□□□ -1.38
SCAPERQ9BY12 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC6.46□□□□□ -1.38
SCAPERQ9BY12 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC6.46□□□□□ -1.38
SCAPERQ9BY12 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC6.46□□□□□ -1.38
SCAPERQ9BY12 AL606490.9-201ENST00000603331 271 ntBASIC6.46□□□□□ -1.38
SCAPERQ9BY12 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
SCAPERQ9BY12 AC015908.5-201ENST00000623289 343 ntBASIC6.46□□□□□ -1.38
SCAPERQ9BY12 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.38
SCAPERQ9BY12 CASC19-261ENST00000641853 1638 ntBASIC6.46□□□□□ -1.38
SCAPERQ9BY12 AP001284.1-201ENST00000528393 2118 ntBASIC6.46□□□□□ -1.38
SCAPERQ9BY12 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
SCAPERQ9BY12 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
SCAPERQ9BY12 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
SCAPERQ9BY12 VPS35P1-201ENST00000563400 1518 ntBASIC6.46□□□□□ -1.38
SCAPERQ9BY12 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SCAPERQ9BY12 AC091390.3-201ENST00000426478 338 ntBASIC6.45□□□□□ -1.38
SCAPERQ9BY12 HSPE1P16-201ENST00000426640 348 ntBASIC6.45□□□□□ -1.38
SCAPERQ9BY12 RPL21P91-201ENST00000429231 479 ntBASIC6.45□□□□□ -1.38
SCAPERQ9BY12 RPEP2-201ENST00000432149 701 ntBASIC6.45□□□□□ -1.38
SCAPERQ9BY12 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SCAPERQ9BY12 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SCAPERQ9BY12 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC6.45□□□□□ -1.38
SCAPERQ9BY12 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC6.45□□□□□ -1.38
SCAPERQ9BY12 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC6.45□□□□□ -1.38
SCAPERQ9BY12 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC6.45□□□□□ -1.38
SCAPERQ9BY12 AC007179.3-201ENST00000604976 235 ntBASIC6.45□□□□□ -1.38
SCAPERQ9BY12 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC6.45□□□□□ -1.38
SCAPERQ9BY12 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
SCAPERQ9BY12 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
SCAPERQ9BY12 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
SCAPERQ9BY12 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
SCAPERQ9BY12 AC006971.1-201ENST00000407916 4486 ntBASIC6.45□□□□□ -1.38
SCAPERQ9BY12 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SCAPERQ9BY12 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SCAPERQ9BY12 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC6.44□□□□□ -1.38
SCAPERQ9BY12 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC6.44□□□□□ -1.38
SCAPERQ9BY12 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SCAPERQ9BY12 AC006042.3-201ENST00000454684 1469 ntBASIC6.44□□□□□ -1.38
SCAPERQ9BY12 OR56B2P-201ENST00000317102 954 ntBASIC6.44□□□□□ -1.38
SCAPERQ9BY12 RPL23AP81-201ENST00000455252 467 ntBASIC6.44□□□□□ -1.38
SCAPERQ9BY12 RPL7P49-201ENST00000471402 708 ntBASIC6.44□□□□□ -1.38
SCAPERQ9BY12 GAPDHP36-201ENST00000480688 918 ntBASIC6.44□□□□□ -1.38
SCAPERQ9BY12 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC6.44□□□□□ -1.38
SCAPERQ9BY12 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC6.44□□□□□ -1.38
SCAPERQ9BY12 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC6.44□□□□□ -1.38
SCAPERQ9BY12 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC6.44□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms