Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 CYCSP42-201ENST00000450823 238 ntBASIC4.29□□□□□ -1.72
SSX3Q99909 RPL37P3-201ENST00000456825 293 ntBASIC4.29□□□□□ -1.72
SSX3Q99909 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.29□□□□□ -1.72
SSX3Q99909 RN7SL727P-201ENST00000482164 296 ntBASIC4.29□□□□□ -1.72
SSX3Q99909 RN7SL423P-201ENST00000486202 304 ntBASIC4.29□□□□□ -1.72
SSX3Q99909 RWDD4P1-201ENST00000488019 565 ntBASIC4.29□□□□□ -1.72
SSX3Q99909 RPS12P31-201ENST00000491419 398 ntBASIC4.29□□□□□ -1.72
SSX3Q99909 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC4.29□□□□□ -1.72
SSX3Q99909 IGBP1P4-201ENST00000503202 879 ntBASIC4.29□□□□□ -1.72
SSX3Q99909 NIFKP7-201ENST00000503365 834 ntBASIC4.29□□□□□ -1.72
SSX3Q99909 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC4.29□□□□□ -1.72
SSX3Q99909 AC073358.1-201ENST00000505671 684 ntBASIC4.29□□□□□ -1.72
SSX3Q99909 RPS4XP20-201ENST00000505751 772 ntBASIC4.29□□□□□ -1.72
SSX3Q99909 HMGB3P16-201ENST00000508037 287 ntBASIC4.29□□□□□ -1.72
SSX3Q99909 VWA8P1-201ENST00000510889 176 ntBASIC4.29□□□□□ -1.72
SSX3Q99909 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC4.29□□□□□ -1.72
SSX3Q99909 AC022360.1-201ENST00000521058 340 ntBASIC4.29□□□□□ -1.72
SSX3Q99909 MTND1P36-201ENST00000522384 936 ntBASIC4.29□□□□□ -1.72
SSX3Q99909 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
SSX3Q99909 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC4.29□□□□□ -1.72
SSX3Q99909 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC4.29□□□□□ -1.72
SSX3Q99909 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.29□□□□□ -1.72
SSX3Q99909 MIR4443-201ENST00000585052 53 ntBASIC4.29□□□□□ -1.72
SSX3Q99909 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC4.29□□□□□ -1.72
SSX3Q99909 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC4.29□□□□□ -1.72
SSX3Q99909 AC011374.2-201ENST00000607135 526 ntBASIC4.29□□□□□ -1.72
SSX3Q99909 AC097505.1-201ENST00000610199 565 ntBASIC4.29□□□□□ -1.72
SSX3Q99909 AC015914.2-201ENST00000618167 288 ntBASIC4.29□□□□□ -1.72
SSX3Q99909 AL035461.2-201ENST00000619201 524 ntBASIC4.29□□□□□ -1.72
SSX3Q99909 AC106730.3-201ENST00000624568 641 ntBASIC4.29□□□□□ -1.72
SSX3Q99909 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.29□□□□□ -1.72
SSX3Q99909 AC100757.1-201ENST00000616872 1835 ntBASIC4.29□□□□□ -1.72
SSX3Q99909 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
SSX3Q99909 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SSX3Q99909 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
SSX3Q99909 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC4.28□□□□□ -1.72
SSX3Q99909 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SSX3Q99909 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
SSX3Q99909 MAPK10-303ENST00000641324 3959 ntBASIC4.28□□□□□ -1.72
SSX3Q99909 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
SSX3Q99909 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SSX3Q99909 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.28□□□□□ -1.72
SSX3Q99909 MIR16-2-201ENST00000362117 81 ntBASIC4.28□□□□□ -1.72
SSX3Q99909 U3.2-201ENST00000362981 210 ntBASIC4.28□□□□□ -1.72
SSX3Q99909 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
SSX3Q99909 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC4.28□□□□□ -1.72
SSX3Q99909 AC013442.1-201ENST00000397347 228 ntBASIC4.28□□□□□ -1.72
SSX3Q99909 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.28□□□□□ -1.72
SSX3Q99909 RN7SKP273-201ENST00000411392 314 ntBASIC4.28□□□□□ -1.72
SSX3Q99909 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC4.28□□□□□ -1.72
SSX3Q99909 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC4.28□□□□□ -1.72
SSX3Q99909 HNRNPA3P4-201ENST00000427514 803 ntBASIC4.28□□□□□ -1.72
SSX3Q99909 AC005033.1-201ENST00000428904 813 ntBASIC4.28□□□□□ -1.72
SSX3Q99909 TRIM60P3Y-201ENST00000432201 673 ntBASIC4.28□□□□□ -1.72
SSX3Q99909 AL512661.1-201ENST00000434586 1253 ntBASIC4.28□□□□□ -1.72
SSX3Q99909 RPL7P29-201ENST00000437151 728 ntBASIC4.28□□□□□ -1.72
SSX3Q99909 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.28□□□□□ -1.72
SSX3Q99909 AP000949.1-201ENST00000438328 629 ntBASIC4.28□□□□□ -1.72
SSX3Q99909 PTMAP6-201ENST00000439110 327 ntBASIC4.28□□□□□ -1.72
SSX3Q99909 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC4.28□□□□□ -1.72
SSX3Q99909 AL389915.2-201ENST00000454576 441 ntBASIC4.28□□□□□ -1.72
SSX3Q99909 AL035090.1-201ENST00000454835 332 ntBASIC4.28□□□□□ -1.72
SSX3Q99909 RN7SL610P-201ENST00000463845 291 ntBASIC4.28□□□□□ -1.72
SSX3Q99909 CBX1P5-201ENST00000475330 559 ntBASIC4.28□□□□□ -1.72
SSX3Q99909 AL161747.1-201ENST00000480068 358 ntBASIC4.28□□□□□ -1.72
SSX3Q99909 RPL7P6-201ENST00000480903 738 ntBASIC4.28□□□□□ -1.72
SSX3Q99909 RPSAP50-201ENST00000481955 852 ntBASIC4.28□□□□□ -1.72
SSX3Q99909 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC4.28□□□□□ -1.72
SSX3Q99909 SNRPCP2-201ENST00000504370 475 ntBASIC4.28□□□□□ -1.72
SSX3Q99909 OR5H4P-201ENST00000510851 923 ntBASIC4.28□□□□□ -1.72
SSX3Q99909 AC133963.2-201ENST00000513686 578 ntBASIC4.28□□□□□ -1.72
SSX3Q99909 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC4.28□□□□□ -1.72
SSX3Q99909 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC4.28□□□□□ -1.72
SSX3Q99909 MAL2-205ENST00000521048 575 ntTSL 4 BASIC4.28□□□□□ -1.72
SSX3Q99909 AC113192.3-201ENST00000529152 742 ntBASIC4.28□□□□□ -1.72
SSX3Q99909 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
SSX3Q99909 HMGN2P6-201ENST00000551091 273 ntBASIC4.28□□□□□ -1.72
SSX3Q99909 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC4.28□□□□□ -1.72
SSX3Q99909 AC067852.4-201ENST00000590314 478 ntBASIC4.28□□□□□ -1.72
SSX3Q99909 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.28□□□□□ -1.72
SSX3Q99909 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC4.28□□□□□ -1.72
SSX3Q99909 RPL26P30-202ENST00000602923 645 ntBASIC4.28□□□□□ -1.72
SSX3Q99909 AC098483.2-201ENST00000603158 454 ntBASIC4.28□□□□□ -1.72
SSX3Q99909 AC095055.1-201ENST00000603472 1113 ntBASIC4.28□□□□□ -1.72
SSX3Q99909 AC009163.6-201ENST00000612367 342 ntBASIC4.28□□□□□ -1.72
SSX3Q99909 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SSX3Q99909 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC4.28□□□□□ -1.72
SSX3Q99909 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC4.28□□□□□ -1.72
SSX3Q99909 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SSX3Q99909 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.28□□□□□ -1.72
SSX3Q99909 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.28□□□□□ -1.72
SSX3Q99909 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SSX3Q99909 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SSX3Q99909 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
SSX3Q99909 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.28□□□□□ -1.72
SSX3Q99909 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.28□□□□□ -1.72
SSX3Q99909 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SSX3Q99909 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.28□□□□□ -1.72
SSX3Q99909 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.28□□□□□ -1.73
SSX3Q99909 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 120.7 ms