Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.23□□□□□ -1.73
COL21A1Q96P44 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.23□□□□□ -1.73
COL21A1Q96P44 OR51K1P-201ENST00000510214 950 ntBASIC4.23□□□□□ -1.73
COL21A1Q96P44 RNU6-319P-201ENST00000516025 108 ntBASIC4.23□□□□□ -1.73
COL21A1Q96P44 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
COL21A1Q96P44 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.23□□□□□ -1.73
COL21A1Q96P44 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.23□□□□□ -1.73
COL21A1Q96P44 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC4.23□□□□□ -1.73
COL21A1Q96P44 AC018552.1-201ENST00000562099 811 ntBASIC4.23□□□□□ -1.73
COL21A1Q96P44 CD24P2-201ENST00000565486 219 ntBASIC4.23□□□□□ -1.73
COL21A1Q96P44 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.23□□□□□ -1.73
COL21A1Q96P44 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC4.23□□□□□ -1.73
COL21A1Q96P44 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC4.23□□□□□ -1.73
COL21A1Q96P44 AC068790.7-201ENST00000602347 528 ntBASIC4.23□□□□□ -1.73
COL21A1Q96P44 AC104785.1-201ENST00000603220 588 ntBASIC4.23□□□□□ -1.73
COL21A1Q96P44 AL592494.3-201ENST00000609485 464 ntBASIC4.23□□□□□ -1.73
COL21A1Q96P44 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.23□□□□□ -1.73
COL21A1Q96P44 AC067931.1-201ENST00000624190 671 ntBASIC4.23□□□□□ -1.73
COL21A1Q96P44 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.23□□□□□ -1.73
COL21A1Q96P44 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
COL21A1Q96P44 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
COL21A1Q96P44 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
COL21A1Q96P44 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
COL21A1Q96P44 DDX18P3-201ENST00000404856 2007 ntBASIC4.22□□□□□ -1.73
COL21A1Q96P44 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
COL21A1Q96P44 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
COL21A1Q96P44 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.22□□□□□ -1.73
COL21A1Q96P44 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC4.22□□□□□ -1.73
COL21A1Q96P44 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
COL21A1Q96P44 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
COL21A1Q96P44 NXPH1-205ENST00000602349 1953 ntBASIC4.22□□□□□ -1.73
COL21A1Q96P44 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
COL21A1Q96P44 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.22□□□□□ -1.73
COL21A1Q96P44 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
COL21A1Q96P44 OR4K15-201ENST00000305051 1216 ntBASIC4.22□□□□□ -1.73
COL21A1Q96P44 RNU1-63P-201ENST00000383902 164 ntBASIC4.22□□□□□ -1.73
COL21A1Q96P44 CYB5AP4-201ENST00000396692 399 ntBASIC4.22□□□□□ -1.73
COL21A1Q96P44 VN1R8P-201ENST00000407739 893 ntBASIC4.22□□□□□ -1.73
COL21A1Q96P44 GLS-203ENST00000409215 632 ntTSL 4 BASIC4.22□□□□□ -1.73
COL21A1Q96P44 AC119751.6-201ENST00000416712 186 ntBASIC4.22□□□□□ -1.73
COL21A1Q96P44 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC4.22□□□□□ -1.73
COL21A1Q96P44 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.22□□□□□ -1.73
COL21A1Q96P44 CENPIP1-201ENST00000425713 902 ntBASIC4.22□□□□□ -1.73
COL21A1Q96P44 AL392003.1-201ENST00000434394 243 ntBASIC4.22□□□□□ -1.73
COL21A1Q96P44 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC4.22□□□□□ -1.73
COL21A1Q96P44 RPL7P33-201ENST00000444159 742 ntBASIC4.22□□□□□ -1.73
COL21A1Q96P44 MTND4LP12-201ENST00000448237 295 ntBASIC4.22□□□□□ -1.73
COL21A1Q96P44 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC4.22□□□□□ -1.73
COL21A1Q96P44 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.22□□□□□ -1.73
COL21A1Q96P44 AC022336.1-201ENST00000475510 337 ntBASIC4.22□□□□□ -1.73
COL21A1Q96P44 AC093267.1-201ENST00000489176 961 ntBASIC4.22□□□□□ -1.73
COL21A1Q96P44 RPL23AP72-201ENST00000492447 435 ntBASIC4.22□□□□□ -1.73
COL21A1Q96P44 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC4.22□□□□□ -1.73
COL21A1Q96P44 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.22□□□□□ -1.73
COL21A1Q96P44 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.22□□□□□ -1.73
COL21A1Q96P44 AC015795.1-201ENST00000513669 327 ntBASIC4.22□□□□□ -1.73
COL21A1Q96P44 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.22□□□□□ -1.73
COL21A1Q96P44 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
COL21A1Q96P44 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.22□□□□□ -1.73
COL21A1Q96P44 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC4.22□□□□□ -1.73
COL21A1Q96P44 AC124856.1-201ENST00000600819 896 ntBASIC4.22□□□□□ -1.73
COL21A1Q96P44 AL137072.1-201ENST00000603444 466 ntBASIC4.22□□□□□ -1.73
COL21A1Q96P44 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
COL21A1Q96P44 MIR6810-201ENST00000622701 70 ntBASIC4.22□□□□□ -1.73
COL21A1Q96P44 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
COL21A1Q96P44 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
COL21A1Q96P44 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.22□□□□□ -1.73
COL21A1Q96P44 AC027290.2-201ENST00000623210 18662 ntBASIC4.22□□□□□ -1.73
COL21A1Q96P44 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
COL21A1Q96P44 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.22□□□□□ -1.73
COL21A1Q96P44 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
COL21A1Q96P44 MFSD4BP1-201ENST00000513330 1552 ntBASIC4.22□□□□□ -1.73
COL21A1Q96P44 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
COL21A1Q96P44 AC105074.1-201ENST00000623380 3095 ntBASIC4.22□□□□□ -1.73
COL21A1Q96P44 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
COL21A1Q96P44 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
COL21A1Q96P44 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
COL21A1Q96P44 DHX40P1-201ENST00000588725 1412 ntBASIC4.21□□□□□ -1.73
COL21A1Q96P44 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.73
COL21A1Q96P44 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
COL21A1Q96P44 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
COL21A1Q96P44 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
COL21A1Q96P44 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
COL21A1Q96P44 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
COL21A1Q96P44 AC021146.4-201ENST00000309229 279 ntBASIC4.21□□□□□ -1.74
COL21A1Q96P44 RHOT1P2-201ENST00000366423 333 ntBASIC4.21□□□□□ -1.74
COL21A1Q96P44 ADIG-201ENST00000373348 430 ntTSL 2 BASIC4.21□□□□□ -1.74
COL21A1Q96P44 RNU1-44P-201ENST00000384453 163 ntBASIC4.21□□□□□ -1.74
COL21A1Q96P44 MIR192-201ENST00000384915 110 ntBASIC4.21□□□□□ -1.74
COL21A1Q96P44 MIR93-201ENST00000385024 80 ntBASIC4.21□□□□□ -1.74
COL21A1Q96P44 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.21□□□□□ -1.74
COL21A1Q96P44 SNORA68.2-201ENST00000391263 128 ntBASIC4.21□□□□□ -1.74
COL21A1Q96P44 SNORA11-201ENST00000408789 128 ntBASIC4.21□□□□□ -1.74
COL21A1Q96P44 RNA5SP104-201ENST00000410989 118 ntBASIC4.21□□□□□ -1.74
COL21A1Q96P44 RN7SKP167-201ENST00000411047 285 ntBASIC4.21□□□□□ -1.74
COL21A1Q96P44 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC4.21□□□□□ -1.74
COL21A1Q96P44 UBTFL3-201ENST00000418934 1024 ntBASIC4.21□□□□□ -1.74
COL21A1Q96P44 VDAC1P6-201ENST00000430062 855 ntBASIC4.21□□□□□ -1.74
COL21A1Q96P44 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC4.21□□□□□ -1.74
COL21A1Q96P44 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms