Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 RNA5SP315-201ENST00000516340 116 ntBASIC5.97□□□□□ -1.45
USP47Q96K76 RNA5SP312-201ENST00000517068 116 ntBASIC5.97□□□□□ -1.45
USP47Q96K76 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.97□□□□□ -1.45
USP47Q96K76 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC5.97□□□□□ -1.45
USP47Q96K76 MIR4429-201ENST00000580105 73 ntBASIC5.97□□□□□ -1.45
USP47Q96K76 AL591034.3-201ENST00000605511 685 ntBASIC5.97□□□□□ -1.45
USP47Q96K76 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC5.97□□□□□ -1.45
USP47Q96K76 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
USP47Q96K76 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC5.97□□□□□ -1.45
USP47Q96K76 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
USP47Q96K76 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
USP47Q96K76 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
USP47Q96K76 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC5.97□□□□□ -1.45
USP47Q96K76 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
USP47Q96K76 AP001273.1-201ENST00000624493 3152 ntBASIC5.97□□□□□ -1.45
USP47Q96K76 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
USP47Q96K76 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.97□□□□□ -1.45
USP47Q96K76 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
USP47Q96K76 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.96□□□□□ -1.45
USP47Q96K76 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.96□□□□□ -1.45
USP47Q96K76 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
USP47Q96K76 VN1R8P-201ENST00000407739 893 ntBASIC5.96□□□□□ -1.45
USP47Q96K76 CASKP1-201ENST00000412870 582 ntBASIC5.96□□□□□ -1.45
USP47Q96K76 EIF1P3-201ENST00000423841 334 ntBASIC5.96□□□□□ -1.45
USP47Q96K76 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC5.96□□□□□ -1.45
USP47Q96K76 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
USP47Q96K76 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC5.96□□□□□ -1.45
USP47Q96K76 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC5.96□□□□□ -1.45
USP47Q96K76 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC5.96□□□□□ -1.45
USP47Q96K76 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC5.96□□□□□ -1.45
USP47Q96K76 RNA5SP246-201ENST00000458909 119 ntBASIC5.96□□□□□ -1.45
USP47Q96K76 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.96□□□□□ -1.45
USP47Q96K76 AC010487.1-201ENST00000594408 1172 ntBASIC5.96□□□□□ -1.45
USP47Q96K76 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
USP47Q96K76 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
USP47Q96K76 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
USP47Q96K76 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
USP47Q96K76 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
USP47Q96K76 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
USP47Q96K76 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC5.96□□□□□ -1.46
USP47Q96K76 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
USP47Q96K76 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
USP47Q96K76 AP000542.2-201ENST00000623199 6179 ntBASIC5.96□□□□□ -1.46
USP47Q96K76 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC5.96□□□□□ -1.46
USP47Q96K76 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
USP47Q96K76 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.96□□□□□ -1.46
USP47Q96K76 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
USP47Q96K76 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
USP47Q96K76 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC5.96□□□□□ -1.46
USP47Q96K76 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
USP47Q96K76 IL6STP1-201ENST00000346911 1020 ntBASIC5.95□□□□□ -1.46
USP47Q96K76 RN7SKP224-201ENST00000364140 325 ntBASIC5.95□□□□□ -1.46
USP47Q96K76 RN7SKP280-201ENST00000364196 304 ntBASIC5.95□□□□□ -1.46
USP47Q96K76 MIR1179-201ENST00000408703 91 ntBASIC5.95□□□□□ -1.46
USP47Q96K76 OR8G2P-201ENST00000412796 908 ntBASIC5.95□□□□□ -1.46
USP47Q96K76 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.95□□□□□ -1.46
USP47Q96K76 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC5.95□□□□□ -1.46
USP47Q96K76 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC5.95□□□□□ -1.46
USP47Q96K76 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC5.95□□□□□ -1.46
USP47Q96K76 AC022034.3-201ENST00000471393 478 ntBASIC5.95□□□□□ -1.46
USP47Q96K76 BNIP3P41-201ENST00000503774 571 ntBASIC5.95□□□□□ -1.46
USP47Q96K76 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC5.95□□□□□ -1.46
USP47Q96K76 SAP18P1-201ENST00000512058 390 ntBASIC5.95□□□□□ -1.46
USP47Q96K76 PHBP17-201ENST00000528576 541 ntBASIC5.95□□□□□ -1.46
USP47Q96K76 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC5.95□□□□□ -1.46
USP47Q96K76 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC5.95□□□□□ -1.46
USP47Q96K76 AC027176.2-201ENST00000559166 746 ntBASIC5.95□□□□□ -1.46
USP47Q96K76 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC5.95□□□□□ -1.46
USP47Q96K76 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC5.95□□□□□ -1.46
USP47Q96K76 RN7SL176P-201ENST00000580352 264 ntBASIC5.95□□□□□ -1.46
USP47Q96K76 MIR492-201ENST00000638676 116 ntBASIC5.95□□□□□ -1.46
USP47Q96K76 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC5.95□□□□□ -1.46
USP47Q96K76 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
USP47Q96K76 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
USP47Q96K76 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.95□□□□□ -1.46
USP47Q96K76 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
USP47Q96K76 AL022722.2-201ENST00000402519 180 ntBASIC5.94□□□□□ -1.46
USP47Q96K76 HDGFP1-201ENST00000405943 252 ntBASIC5.94□□□□□ -1.46
USP47Q96K76 RN7SKP33-201ENST00000410942 340 ntBASIC5.94□□□□□ -1.46
USP47Q96K76 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC5.94□□□□□ -1.46
USP47Q96K76 COX6CP15-201ENST00000426313 211 ntBASIC5.94□□□□□ -1.46
USP47Q96K76 COX6B1P7-201ENST00000430845 235 ntBASIC5.94□□□□□ -1.46
USP47Q96K76 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC5.94□□□□□ -1.46
USP47Q96K76 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC5.94□□□□□ -1.46
USP47Q96K76 RPS20P4-201ENST00000461659 355 ntBASIC5.94□□□□□ -1.46
USP47Q96K76 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.94□□□□□ -1.46
USP47Q96K76 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC5.94□□□□□ -1.46
USP47Q96K76 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC5.94□□□□□ -1.46
USP47Q96K76 AC099522.1-202ENST00000514718 367 ntBASIC5.94□□□□□ -1.46
USP47Q96K76 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
USP47Q96K76 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC5.94□□□□□ -1.46
USP47Q96K76 TVP23BP1-201ENST00000557500 617 ntBASIC5.94□□□□□ -1.46
USP47Q96K76 AC006116.5-201ENST00000591936 559 ntBASIC5.94□□□□□ -1.46
USP47Q96K76 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC5.94□□□□□ -1.46
USP47Q96K76 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC5.94□□□□□ -1.46
USP47Q96K76 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC5.94□□□□□ -1.46
USP47Q96K76 AL133243.3-201ENST00000617415 3004 ntBASIC5.94□□□□□ -1.46
USP47Q96K76 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
USP47Q96K76 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
USP47Q96K76 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 139.4 ms