Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 HNRNPA3P4-201ENST00000427514 803 ntBASIC5.81□□□□□ -1.48
CDK5RAP3Q96JB5 YWHAEP5-201ENST00000431545 765 ntBASIC5.81□□□□□ -1.48
CDK5RAP3Q96JB5 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CDK5RAP3Q96JB5 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC5.81□□□□□ -1.48
CDK5RAP3Q96JB5 MTCO2P20-201ENST00000437339 673 ntBASIC5.81□□□□□ -1.48
CDK5RAP3Q96JB5 ARL5AP2-201ENST00000444698 533 ntBASIC5.81□□□□□ -1.48
CDK5RAP3Q96JB5 AC009127.1-201ENST00000467090 155 ntBASIC5.81□□□□□ -1.48
CDK5RAP3Q96JB5 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.81□□□□□ -1.48
CDK5RAP3Q96JB5 AC104687.1-201ENST00000485829 412 ntBASIC5.81□□□□□ -1.48
CDK5RAP3Q96JB5 UBA52P7-201ENST00000486088 380 ntBASIC5.81□□□□□ -1.48
CDK5RAP3Q96JB5 AC097173.1-201ENST00000505862 819 ntBASIC5.81□□□□□ -1.48
CDK5RAP3Q96JB5 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC5.81□□□□□ -1.48
CDK5RAP3Q96JB5 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC5.81□□□□□ -1.48
CDK5RAP3Q96JB5 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
CDK5RAP3Q96JB5 UBTFL10-201ENST00000528532 562 ntBASIC5.81□□□□□ -1.48
CDK5RAP3Q96JB5 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC5.81□□□□□ -1.48
CDK5RAP3Q96JB5 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.81□□□□□ -1.48
CDK5RAP3Q96JB5 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC5.81□□□□□ -1.48
CDK5RAP3Q96JB5 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC5.81□□□□□ -1.48
CDK5RAP3Q96JB5 AC126915.2-201ENST00000610957 190 ntBASIC5.81□□□□□ -1.48
CDK5RAP3Q96JB5 AC021755.4-201ENST00000616620 456 ntBASIC5.81□□□□□ -1.48
CDK5RAP3Q96JB5 uc_338.9-201ENST00000617424 182 ntBASIC5.81□□□□□ -1.48
CDK5RAP3Q96JB5 MIR6729-201ENST00000618194 65 ntBASIC5.81□□□□□ -1.48
CDK5RAP3Q96JB5 AC010975.3-201ENST00000618727 978 ntBASIC5.81□□□□□ -1.48
CDK5RAP3Q96JB5 GMFB-210ENST00000628554 639 ntTSL 4 BASIC5.81□□□□□ -1.48
CDK5RAP3Q96JB5 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC5.81□□□□□ -1.48
CDK5RAP3Q96JB5 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
CDK5RAP3Q96JB5 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
CDK5RAP3Q96JB5 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
CDK5RAP3Q96JB5 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CDK5RAP3Q96JB5 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CDK5RAP3Q96JB5 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CDK5RAP3Q96JB5 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CDK5RAP3Q96JB5 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CDK5RAP3Q96JB5 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.81□□□□□ -1.48
CDK5RAP3Q96JB5 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CDK5RAP3Q96JB5 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CDK5RAP3Q96JB5 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.8□□□□□ -1.48
CDK5RAP3Q96JB5 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CDK5RAP3Q96JB5 AC063976.2-201ENST00000425667 3556 ntBASIC5.8□□□□□ -1.48
CDK5RAP3Q96JB5 AC235565.1-201ENST00000456962 1325 ntBASIC5.8□□□□□ -1.48
CDK5RAP3Q96JB5 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CDK5RAP3Q96JB5 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
CDK5RAP3Q96JB5 SNORA17.1-201ENST00000362945 126 ntBASIC5.8□□□□□ -1.48
CDK5RAP3Q96JB5 RNU4-28P-201ENST00000364739 141 ntBASIC5.8□□□□□ -1.48
CDK5RAP3Q96JB5 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC5.8□□□□□ -1.48
CDK5RAP3Q96JB5 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC5.8□□□□□ -1.48
CDK5RAP3Q96JB5 Y_RNA.472-201ENST00000384322 102 ntBASIC5.8□□□□□ -1.48
CDK5RAP3Q96JB5 RNU6-636P-201ENST00000384598 107 ntBASIC5.8□□□□□ -1.48
CDK5RAP3Q96JB5 AC092642.1-201ENST00000392417 425 ntBASIC5.8□□□□□ -1.48
CDK5RAP3Q96JB5 DUTP5-201ENST00000406790 469 ntBASIC5.8□□□□□ -1.48
CDK5RAP3Q96JB5 RNU2-50P-201ENST00000410494 143 ntBASIC5.8□□□□□ -1.48
CDK5RAP3Q96JB5 KRR1P1-201ENST00000419430 803 ntBASIC5.8□□□□□ -1.48
CDK5RAP3Q96JB5 GTF2IP2-201ENST00000424290 697 ntBASIC5.8□□□□□ -1.48
CDK5RAP3Q96JB5 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC5.8□□□□□ -1.48
CDK5RAP3Q96JB5 OR52B5P-201ENST00000435337 951 ntBASIC5.8□□□□□ -1.48
CDK5RAP3Q96JB5 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC5.8□□□□□ -1.48
CDK5RAP3Q96JB5 AL589880.1-201ENST00000448271 287 ntBASIC5.8□□□□□ -1.48
CDK5RAP3Q96JB5 FAR2P1-206ENST00000449736 709 ntBASIC5.8□□□□□ -1.48
CDK5RAP3Q96JB5 AC093166.2-201ENST00000455969 1017 ntBASIC5.8□□□□□ -1.48
CDK5RAP3Q96JB5 RNU7-140P-201ENST00000459546 60 ntBASIC5.8□□□□□ -1.48
CDK5RAP3Q96JB5 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC5.8□□□□□ -1.48
CDK5RAP3Q96JB5 RN7SL30P-201ENST00000488416 306 ntBASIC5.8□□□□□ -1.48
CDK5RAP3Q96JB5 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC5.8□□□□□ -1.48
CDK5RAP3Q96JB5 MYL12BP2-201ENST00000503948 512 ntBASIC5.8□□□□□ -1.48
CDK5RAP3Q96JB5 AC111193.1-201ENST00000504097 155 ntBASIC5.8□□□□□ -1.48
CDK5RAP3Q96JB5 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.8□□□□□ -1.48
CDK5RAP3Q96JB5 AC100784.1-201ENST00000522790 310 ntBASIC5.8□□□□□ -1.48
CDK5RAP3Q96JB5 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC5.8□□□□□ -1.48
CDK5RAP3Q96JB5 VBP1-203ENST00000535916 944 ntTSL 2 BASIC5.8□□□□□ -1.48
CDK5RAP3Q96JB5 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
CDK5RAP3Q96JB5 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC5.8□□□□□ -1.48
CDK5RAP3Q96JB5 AC006349.1-201ENST00000555526 235 ntBASIC5.8□□□□□ -1.48
CDK5RAP3Q96JB5 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC5.8□□□□□ -1.48
CDK5RAP3Q96JB5 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC5.8□□□□□ -1.48
CDK5RAP3Q96JB5 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC5.8□□□□□ -1.48
CDK5RAP3Q96JB5 AC023824.3-201ENST00000569003 562 ntBASIC5.8□□□□□ -1.48
CDK5RAP3Q96JB5 MIR3176-201ENST00000582210 90 ntBASIC5.8□□□□□ -1.48
CDK5RAP3Q96JB5 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.8□□□□□ -1.48
CDK5RAP3Q96JB5 AC125494.3-201ENST00000602759 455 ntBASIC5.8□□□□□ -1.48
CDK5RAP3Q96JB5 AC095055.1-201ENST00000603472 1113 ntBASIC5.8□□□□□ -1.48
CDK5RAP3Q96JB5 AC013470.4-201ENST00000619978 986 ntBASIC5.8□□□□□ -1.48
CDK5RAP3Q96JB5 AC024595.1-201ENST00000623088 387 ntBASIC5.8□□□□□ -1.48
CDK5RAP3Q96JB5 AL121594.5-201ENST00000631724 573 ntBASIC5.8□□□□□ -1.48
CDK5RAP3Q96JB5 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC5.8□□□□□ -1.48
CDK5RAP3Q96JB5 OR52B5P-202ENST00000641118 1110 ntBASIC5.8□□□□□ -1.48
CDK5RAP3Q96JB5 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
CDK5RAP3Q96JB5 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC5.8□□□□□ -1.48
CDK5RAP3Q96JB5 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
CDK5RAP3Q96JB5 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CDK5RAP3Q96JB5 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CDK5RAP3Q96JB5 AC092079.1-201ENST00000558620 1985 ntBASIC5.8□□□□□ -1.48
CDK5RAP3Q96JB5 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.8□□□□□ -1.48
CDK5RAP3Q96JB5 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CDK5RAP3Q96JB5 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CDK5RAP3Q96JB5 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC5.79□□□□□ -1.48
CDK5RAP3Q96JB5 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CDK5RAP3Q96JB5 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CDK5RAP3Q96JB5 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
CDK5RAP3Q96JB5 U3.2-201ENST00000362981 210 ntBASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms