Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 RNU1-87P-201ENST00000363727 170 ntBASIC4.73□□□□□ -1.65
VPS33AQ96AX1 RNU6-481P-201ENST00000384194 107 ntBASIC4.73□□□□□ -1.65
VPS33AQ96AX1 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC4.73□□□□□ -1.65
VPS33AQ96AX1 AL592291.1-201ENST00000403830 352 ntBASIC4.73□□□□□ -1.65
VPS33AQ96AX1 AL445183.3-201ENST00000414168 502 ntBASIC4.73□□□□□ -1.65
VPS33AQ96AX1 ATP6V1G1P7-201ENST00000415853 349 ntBASIC4.73□□□□□ -1.65
VPS33AQ96AX1 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC4.73□□□□□ -1.65
VPS33AQ96AX1 IGKV1OR9-1-201ENST00000424370 284 ntBASIC4.73□□□□□ -1.65
VPS33AQ96AX1 EIF4HP2-201ENST00000424380 563 ntBASIC4.73□□□□□ -1.65
VPS33AQ96AX1 AC108075.1-201ENST00000424692 529 ntBASIC4.73□□□□□ -1.65
VPS33AQ96AX1 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.73□□□□□ -1.65
VPS33AQ96AX1 FABP7P2-201ENST00000429946 379 ntBASIC4.73□□□□□ -1.65
VPS33AQ96AX1 UBE2V1P6-201ENST00000430840 422 ntBASIC4.73□□□□□ -1.65
VPS33AQ96AX1 CDY14P-201ENST00000431260 1014 ntBASIC4.73□□□□□ -1.65
VPS33AQ96AX1 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.73□□□□□ -1.65
VPS33AQ96AX1 FABP5P3-201ENST00000437960 408 ntBASIC4.73□□□□□ -1.65
VPS33AQ96AX1 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC4.73□□□□□ -1.65
VPS33AQ96AX1 CDY12P-201ENST00000440679 1015 ntBASIC4.73□□□□□ -1.65
VPS33AQ96AX1 CDY13P-201ENST00000445813 1015 ntBASIC4.73□□□□□ -1.65
VPS33AQ96AX1 TCEA1P1-201ENST00000449716 880 ntBASIC4.73□□□□□ -1.65
VPS33AQ96AX1 CDY23P-201ENST00000451661 1014 ntBASIC4.73□□□□□ -1.65
VPS33AQ96AX1 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC4.73□□□□□ -1.65
VPS33AQ96AX1 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
VPS33AQ96AX1 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC4.73□□□□□ -1.65
VPS33AQ96AX1 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.73□□□□□ -1.65
VPS33AQ96AX1 MTATP6P1-201ENST00000514057 681 ntBASIC4.73□□□□□ -1.65
VPS33AQ96AX1 RNU6-334P-201ENST00000517072 102 ntBASIC4.73□□□□□ -1.65
VPS33AQ96AX1 AC134698.5-201ENST00000519444 336 ntBASIC4.73□□□□□ -1.65
VPS33AQ96AX1 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.73□□□□□ -1.65
VPS33AQ96AX1 C1DP5-201ENST00000525775 383 ntBASIC4.73□□□□□ -1.65
VPS33AQ96AX1 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC4.73□□□□□ -1.65
VPS33AQ96AX1 AC092451.2-201ENST00000538746 658 ntBASIC4.73□□□□□ -1.65
VPS33AQ96AX1 HNRNPCP4-201ENST00000571636 900 ntBASIC4.73□□□□□ -1.65
VPS33AQ96AX1 MTATP6P2-201ENST00000603319 678 ntBASIC4.73□□□□□ -1.65
VPS33AQ96AX1 AC026741.1-201ENST00000605892 482 ntBASIC4.73□□□□□ -1.65
VPS33AQ96AX1 AC021851.1-201ENST00000608537 1082 ntBASIC4.73□□□□□ -1.65
VPS33AQ96AX1 AC004477.3-201ENST00000614061 590 ntBASIC4.73□□□□□ -1.65
VPS33AQ96AX1 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.73□□□□□ -1.65
VPS33AQ96AX1 AC006249.1-201ENST00000621223 471 ntBASIC4.73□□□□□ -1.65
VPS33AQ96AX1 AP003400.6-201ENST00000624698 740 ntBASIC4.73□□□□□ -1.65
VPS33AQ96AX1 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC4.73□□□□□ -1.65
VPS33AQ96AX1 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC4.73□□□□□ -1.65
VPS33AQ96AX1 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC4.73□□□□□ -1.65
VPS33AQ96AX1 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC4.73□□□□□ -1.65
VPS33AQ96AX1 OR8A1-204ENST00000642111 1145 ntBASIC4.73□□□□□ -1.65
VPS33AQ96AX1 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
VPS33AQ96AX1 AC083899.2-201ENST00000423285 1376 ntBASIC4.73□□□□□ -1.65
VPS33AQ96AX1 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
VPS33AQ96AX1 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
VPS33AQ96AX1 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.73□□□□□ -1.65
VPS33AQ96AX1 AC046144.1-201ENST00000478559 1853 ntBASIC4.73□□□□□ -1.65
VPS33AQ96AX1 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC4.72□□□□□ -1.65
VPS33AQ96AX1 DDX18P5-201ENST00000534547 1306 ntBASIC4.72□□□□□ -1.65
VPS33AQ96AX1 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
VPS33AQ96AX1 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
VPS33AQ96AX1 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.72□□□□□ -1.65
VPS33AQ96AX1 DHX9P1-201ENST00000436565 3076 ntBASIC4.72□□□□□ -1.65
VPS33AQ96AX1 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.72□□□□□ -1.65
VPS33AQ96AX1 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
VPS33AQ96AX1 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
VPS33AQ96AX1 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC4.72□□□□□ -1.65
VPS33AQ96AX1 RGS17P1-201ENST00000423358 553 ntBASIC4.72□□□□□ -1.65
VPS33AQ96AX1 RPL30P3-201ENST00000424262 333 ntBASIC4.72□□□□□ -1.65
VPS33AQ96AX1 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
VPS33AQ96AX1 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC4.72□□□□□ -1.65
VPS33AQ96AX1 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC4.72□□□□□ -1.65
VPS33AQ96AX1 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC4.72□□□□□ -1.65
VPS33AQ96AX1 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
VPS33AQ96AX1 IGHV5-78-201ENST00000450948 295 ntBASIC4.72□□□□□ -1.65
VPS33AQ96AX1 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
VPS33AQ96AX1 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC4.72□□□□□ -1.65
VPS33AQ96AX1 AC023141.9-201ENST00000458734 412 ntBASIC4.72□□□□□ -1.65
VPS33AQ96AX1 RN7SL717P-201ENST00000478343 297 ntBASIC4.72□□□□□ -1.65
VPS33AQ96AX1 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
VPS33AQ96AX1 FTH1P24-201ENST00000503502 462 ntBASIC4.72□□□□□ -1.65
VPS33AQ96AX1 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC4.72□□□□□ -1.65
VPS33AQ96AX1 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC4.72□□□□□ -1.65
VPS33AQ96AX1 PGAM1P13-201ENST00000507497 754 ntBASIC4.72□□□□□ -1.65
VPS33AQ96AX1 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.72□□□□□ -1.65
VPS33AQ96AX1 RNA5SP362-201ENST00000516048 118 ntBASIC4.72□□□□□ -1.65
VPS33AQ96AX1 RN7SKP283-201ENST00000517197 270 ntBASIC4.72□□□□□ -1.65
VPS33AQ96AX1 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC4.72□□□□□ -1.65
VPS33AQ96AX1 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.72□□□□□ -1.65
VPS33AQ96AX1 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.72□□□□□ -1.65
VPS33AQ96AX1 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.72□□□□□ -1.65
VPS33AQ96AX1 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.72□□□□□ -1.65
VPS33AQ96AX1 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC4.72□□□□□ -1.65
VPS33AQ96AX1 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC4.72□□□□□ -1.65
VPS33AQ96AX1 AC015982.1-201ENST00000608113 465 ntBASIC4.72□□□□□ -1.65
VPS33AQ96AX1 AC243756.2-201ENST00000618406 463 ntBASIC4.72□□□□□ -1.65
VPS33AQ96AX1 AC093875.1-201ENST00000623688 504 ntBASIC4.72□□□□□ -1.65
VPS33AQ96AX1 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.72□□□□□ -1.65
VPS33AQ96AX1 AL132640.2-201ENST00000559968 1698 ntBASIC4.72□□□□□ -1.65
VPS33AQ96AX1 AL359922.3-201ENST00000624779 1670 ntBASIC4.72□□□□□ -1.65
VPS33AQ96AX1 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.72□□□□□ -1.65
VPS33AQ96AX1 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.72□□□□□ -1.65
VPS33AQ96AX1 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
VPS33AQ96AX1 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
VPS33AQ96AX1 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.72□□□□□ -1.65
VPS33AQ96AX1 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms