Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
ATG4AQ8WYN0 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.3□□□□□ -1.56
ATG4AQ8WYN0 AC107021.2-201ENST00000567714 2095 ntBASIC5.3□□□□□ -1.56
ATG4AQ8WYN0 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC5.3□□□□□ -1.56
ATG4AQ8WYN0 DDX18P5-201ENST00000534547 1306 ntBASIC5.3□□□□□ -1.56
ATG4AQ8WYN0 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.3□□□□□ -1.56
ATG4AQ8WYN0 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
ATG4AQ8WYN0 CYP4Z2P-201ENST00000423332 1512 ntBASIC5.3□□□□□ -1.56
ATG4AQ8WYN0 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC5.3□□□□□ -1.56
ATG4AQ8WYN0 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.3□□□□□ -1.56
ATG4AQ8WYN0 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.3□□□□□ -1.56
ATG4AQ8WYN0 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
ATG4AQ8WYN0 SNORD116.1-201ENST00000365628 92 ntBASIC5.3□□□□□ -1.56
ATG4AQ8WYN0 RNU6-532P-201ENST00000384318 107 ntBASIC5.3□□□□□ -1.56
ATG4AQ8WYN0 RNU6-185P-201ENST00000384421 107 ntBASIC5.3□□□□□ -1.56
ATG4AQ8WYN0 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC5.3□□□□□ -1.56
ATG4AQ8WYN0 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC5.3□□□□□ -1.56
ATG4AQ8WYN0 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
ATG4AQ8WYN0 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC5.3□□□□□ -1.56
ATG4AQ8WYN0 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC5.3□□□□□ -1.56
ATG4AQ8WYN0 TRGV6-201ENST00000417928 299 ntBASIC5.3□□□□□ -1.56
ATG4AQ8WYN0 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC5.3□□□□□ -1.56
ATG4AQ8WYN0 AC027644.1-201ENST00000419595 298 ntBASIC5.3□□□□□ -1.56
ATG4AQ8WYN0 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.3□□□□□ -1.56
ATG4AQ8WYN0 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.3□□□□□ -1.56
ATG4AQ8WYN0 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC5.3□□□□□ -1.56
ATG4AQ8WYN0 DPY19L1P2-201ENST00000426647 915 ntBASIC5.3□□□□□ -1.56
ATG4AQ8WYN0 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC5.3□□□□□ -1.56
ATG4AQ8WYN0 FAM96AP1-201ENST00000430879 482 ntBASIC5.3□□□□□ -1.56
ATG4AQ8WYN0 AC104978.1-201ENST00000449387 391 ntBASIC5.3□□□□□ -1.56
ATG4AQ8WYN0 RPS27AP2-201ENST00000457576 465 ntBASIC5.3□□□□□ -1.56
ATG4AQ8WYN0 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC5.3□□□□□ -1.56
ATG4AQ8WYN0 AC091180.1-201ENST00000462104 372 ntBASIC5.3□□□□□ -1.56
ATG4AQ8WYN0 AL133445.1-201ENST00000467051 452 ntBASIC5.3□□□□□ -1.56
ATG4AQ8WYN0 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC5.3□□□□□ -1.56
ATG4AQ8WYN0 RN7SL184P-201ENST00000488308 297 ntBASIC5.3□□□□□ -1.56
ATG4AQ8WYN0 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC5.3□□□□□ -1.56
ATG4AQ8WYN0 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC5.3□□□□□ -1.56
ATG4AQ8WYN0 snoZ278.1-201ENST00000517059 112 ntBASIC5.3□□□□□ -1.56
ATG4AQ8WYN0 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC5.3□□□□□ -1.56
ATG4AQ8WYN0 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC5.3□□□□□ -1.56
ATG4AQ8WYN0 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.3□□□□□ -1.56
ATG4AQ8WYN0 AC025260.1-201ENST00000548858 430 ntBASIC5.3□□□□□ -1.56
ATG4AQ8WYN0 AC009852.2-201ENST00000567898 485 ntBASIC5.3□□□□□ -1.56
ATG4AQ8WYN0 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC5.3□□□□□ -1.56
ATG4AQ8WYN0 MTCYBP33-201ENST00000575007 1130 ntBASIC5.3□□□□□ -1.56
ATG4AQ8WYN0 MYLK-221ENST00000583087 678 ntTSL 4 BASIC5.3□□□□□ -1.56
ATG4AQ8WYN0 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
ATG4AQ8WYN0 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC5.3□□□□□ -1.56
ATG4AQ8WYN0 AL583856.2-201ENST00000606298 543 ntBASIC5.3□□□□□ -1.56
ATG4AQ8WYN0 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.3□□□□□ -1.56
ATG4AQ8WYN0 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC5.3□□□□□ -1.56
ATG4AQ8WYN0 AC109309.2-201ENST00000612597 332 ntBASIC5.3□□□□□ -1.56
ATG4AQ8WYN0 VN1R74P-201ENST00000613259 503 ntBASIC5.3□□□□□ -1.56
ATG4AQ8WYN0 AC007204.2-201ENST00000615022 616 ntBASIC5.3□□□□□ -1.56
ATG4AQ8WYN0 STMN1P1-201ENST00000617809 440 ntBASIC5.3□□□□□ -1.56
ATG4AQ8WYN0 AL158163.2-201ENST00000619110 700 ntBASIC5.3□□□□□ -1.56
ATG4AQ8WYN0 REV3L-214ENST00000619481 969 ntTSL 5 BASIC5.3□□□□□ -1.56
ATG4AQ8WYN0 AC067852.7-201ENST00000623270 535 ntBASIC5.3□□□□□ -1.56
ATG4AQ8WYN0 AP000676.3-201ENST00000623299 569 ntBASIC5.3□□□□□ -1.56
ATG4AQ8WYN0 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
ATG4AQ8WYN0 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.3□□□□□ -1.56
ATG4AQ8WYN0 AL022393.1-201ENST00000625142 1677 ntBASIC5.3□□□□□ -1.56
ATG4AQ8WYN0 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.3□□□□□ -1.56
ATG4AQ8WYN0 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
ATG4AQ8WYN0 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.3□□□□□ -1.56
ATG4AQ8WYN0 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC5.29□□□□□ -1.56
ATG4AQ8WYN0 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.29□□□□□ -1.56
ATG4AQ8WYN0 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
ATG4AQ8WYN0 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
ATG4AQ8WYN0 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
ATG4AQ8WYN0 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
ATG4AQ8WYN0 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
ATG4AQ8WYN0 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.29□□□□□ -1.56
ATG4AQ8WYN0 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
ATG4AQ8WYN0 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.29□□□□□ -1.56
ATG4AQ8WYN0 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.29□□□□□ -1.56
ATG4AQ8WYN0 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.29□□□□□ -1.56
ATG4AQ8WYN0 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
ATG4AQ8WYN0 ENSAP3-201ENST00000312710 333 ntBASIC5.29□□□□□ -1.56
ATG4AQ8WYN0 RNU6-543P-201ENST00000362576 108 ntBASIC5.29□□□□□ -1.56
ATG4AQ8WYN0 RNU6-666P-201ENST00000363499 107 ntBASIC5.29□□□□□ -1.56
ATG4AQ8WYN0 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
ATG4AQ8WYN0 SNORA40.2-201ENST00000390847 128 ntBASIC5.29□□□□□ -1.56
ATG4AQ8WYN0 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC5.29□□□□□ -1.56
ATG4AQ8WYN0 RNA5SP498-201ENST00000411342 120 ntBASIC5.29□□□□□ -1.56
ATG4AQ8WYN0 MTND4P22-201ENST00000413116 1169 ntBASIC5.29□□□□□ -1.56
ATG4AQ8WYN0 AC105402.1-201ENST00000413336 545 ntBASIC5.29□□□□□ -1.56
ATG4AQ8WYN0 TCEA1P4-201ENST00000415066 844 ntBASIC5.29□□□□□ -1.56
ATG4AQ8WYN0 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC5.29□□□□□ -1.56
ATG4AQ8WYN0 AC013429.2-201ENST00000418798 781 ntBASIC5.29□□□□□ -1.56
ATG4AQ8WYN0 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC5.29□□□□□ -1.56
ATG4AQ8WYN0 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC5.29□□□□□ -1.56
ATG4AQ8WYN0 HSD52-202ENST00000436225 772 ntTSL 3 BASIC5.29□□□□□ -1.56
ATG4AQ8WYN0 UBE2D3P1-201ENST00000436669 444 ntBASIC5.29□□□□□ -1.56
ATG4AQ8WYN0 RPL35AP21-201ENST00000437667 333 ntBASIC5.29□□□□□ -1.56
ATG4AQ8WYN0 FGF7P5-201ENST00000441829 291 ntBASIC5.29□□□□□ -1.56
ATG4AQ8WYN0 RPS11P7-201ENST00000442125 465 ntBASIC5.29□□□□□ -1.56
ATG4AQ8WYN0 AC007327.1-201ENST00000447461 264 ntBASIC5.29□□□□□ -1.56
ATG4AQ8WYN0 BTF3P6-201ENST00000448054 499 ntBASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms