Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 YWHAZP1-201ENST00000556286 722 ntBASIC4.84□□□□□ -1.63
SLC44A1Q8WWI5 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SLC44A1Q8WWI5 AC011447.4-201ENST00000587562 111 ntBASIC4.84□□□□□ -1.63
SLC44A1Q8WWI5 COX6CP4-201ENST00000605798 228 ntBASIC4.84□□□□□ -1.63
SLC44A1Q8WWI5 AC140113.4-201ENST00000622087 222 ntBASIC4.84□□□□□ -1.63
SLC44A1Q8WWI5 AL353662.3-201ENST00000625131 237 ntBASIC4.84□□□□□ -1.63
SLC44A1Q8WWI5 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SLC44A1Q8WWI5 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SLC44A1Q8WWI5 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.84□□□□□ -1.64
SLC44A1Q8WWI5 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
SLC44A1Q8WWI5 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
SLC44A1Q8WWI5 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.84□□□□□ -1.64
SLC44A1Q8WWI5 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
SLC44A1Q8WWI5 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
SLC44A1Q8WWI5 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
SLC44A1Q8WWI5 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC4.84□□□□□ -1.64
SLC44A1Q8WWI5 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SLC44A1Q8WWI5 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC4.83□□□□□ -1.64
SLC44A1Q8WWI5 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SLC44A1Q8WWI5 AC104118.1-201ENST00000607625 1589 ntBASIC4.83□□□□□ -1.64
SLC44A1Q8WWI5 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SLC44A1Q8WWI5 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
SLC44A1Q8WWI5 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
SLC44A1Q8WWI5 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
SLC44A1Q8WWI5 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC4.83□□□□□ -1.64
SLC44A1Q8WWI5 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SLC44A1Q8WWI5 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.83□□□□□ -1.64
SLC44A1Q8WWI5 MFSD8-213ENST00000641134 1327 ntBASIC4.83□□□□□ -1.64
SLC44A1Q8WWI5 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SLC44A1Q8WWI5 RPL23P2-201ENST00000320371 421 ntBASIC4.83□□□□□ -1.64
SLC44A1Q8WWI5 SNORA74A-201ENST00000364089 198 ntBASIC4.83□□□□□ -1.64
SLC44A1Q8WWI5 SNORA70-201ENST00000384436 135 ntBASIC4.83□□□□□ -1.64
SLC44A1Q8WWI5 AL021331.1-201ENST00000402817 582 ntBASIC4.83□□□□□ -1.64
SLC44A1Q8WWI5 AL080315.1-201ENST00000406055 466 ntBASIC4.83□□□□□ -1.64
SLC44A1Q8WWI5 AL355615.1-201ENST00000406187 641 ntBASIC4.83□□□□□ -1.64
SLC44A1Q8WWI5 RN7SKP273-201ENST00000411392 314 ntBASIC4.83□□□□□ -1.64
SLC44A1Q8WWI5 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.83□□□□□ -1.64
SLC44A1Q8WWI5 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC4.83□□□□□ -1.64
SLC44A1Q8WWI5 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC4.83□□□□□ -1.64
SLC44A1Q8WWI5 RHOT1P3-201ENST00000436571 331 ntBASIC4.83□□□□□ -1.64
SLC44A1Q8WWI5 PTMAP6-201ENST00000439110 327 ntBASIC4.83□□□□□ -1.64
SLC44A1Q8WWI5 RPS17P11-201ENST00000474297 293 ntBASIC4.83□□□□□ -1.64
SLC44A1Q8WWI5 RN7SL222P-201ENST00000476452 299 ntBASIC4.83□□□□□ -1.64
SLC44A1Q8WWI5 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC4.83□□□□□ -1.64
SLC44A1Q8WWI5 AC107398.1-201ENST00000486904 505 ntBASIC4.83□□□□□ -1.64
SLC44A1Q8WWI5 RPL32P9-201ENST00000487963 407 ntBASIC4.83□□□□□ -1.64
SLC44A1Q8WWI5 AC104971.1-201ENST00000495117 578 ntBASIC4.83□□□□□ -1.64
SLC44A1Q8WWI5 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC4.83□□□□□ -1.64
SLC44A1Q8WWI5 RN7SKP141-201ENST00000516167 338 ntBASIC4.83□□□□□ -1.64
SLC44A1Q8WWI5 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC4.83□□□□□ -1.64
SLC44A1Q8WWI5 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC4.83□□□□□ -1.64
SLC44A1Q8WWI5 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC4.83□□□□□ -1.64
SLC44A1Q8WWI5 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.83□□□□□ -1.64
SLC44A1Q8WWI5 AC087894.1-201ENST00000538359 518 ntBASIC4.83□□□□□ -1.64
SLC44A1Q8WWI5 APPL2-203ENST00000546731 684 ntTSL 2 BASIC4.83□□□□□ -1.64
SLC44A1Q8WWI5 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
SLC44A1Q8WWI5 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.83□□□□□ -1.64
SLC44A1Q8WWI5 OR11J2P-201ENST00000555298 907 ntBASIC4.83□□□□□ -1.64
SLC44A1Q8WWI5 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC4.83□□□□□ -1.64
SLC44A1Q8WWI5 AC093249.4-201ENST00000564755 259 ntBASIC4.83□□□□□ -1.64
SLC44A1Q8WWI5 CD24P2-201ENST00000565486 219 ntBASIC4.83□□□□□ -1.64
SLC44A1Q8WWI5 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC4.83□□□□□ -1.64
SLC44A1Q8WWI5 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC4.83□□□□□ -1.64
SLC44A1Q8WWI5 AC124856.1-201ENST00000600819 896 ntBASIC4.83□□□□□ -1.64
SLC44A1Q8WWI5 AC023762.1-201ENST00000603280 584 ntBASIC4.83□□□□□ -1.64
SLC44A1Q8WWI5 AL137072.1-201ENST00000603444 466 ntBASIC4.83□□□□□ -1.64
SLC44A1Q8WWI5 RPAP2P1-201ENST00000603626 1168 ntBASIC4.83□□□□□ -1.64
SLC44A1Q8WWI5 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC4.83□□□□□ -1.64
SLC44A1Q8WWI5 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SLC44A1Q8WWI5 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.83□□□□□ -1.64
SLC44A1Q8WWI5 AC010608.3-201ENST00000625048 527 ntBASIC4.83□□□□□ -1.64
SLC44A1Q8WWI5 AC099654.9-201ENST00000637055 678 ntBASIC4.83□□□□□ -1.64
SLC44A1Q8WWI5 AL592182.3-201ENST00000642132 3304 ntBASIC4.83□□□□□ -1.64
SLC44A1Q8WWI5 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
SLC44A1Q8WWI5 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SLC44A1Q8WWI5 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.83□□□□□ -1.64
SLC44A1Q8WWI5 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SLC44A1Q8WWI5 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
SLC44A1Q8WWI5 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SLC44A1Q8WWI5 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.82□□□□□ -1.64
SLC44A1Q8WWI5 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.82□□□□□ -1.64
SLC44A1Q8WWI5 EEF1A1P36-201ENST00000427807 1351 ntBASIC4.82□□□□□ -1.64
SLC44A1Q8WWI5 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SLC44A1Q8WWI5 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.82□□□□□ -1.64
SLC44A1Q8WWI5 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.82□□□□□ -1.64
SLC44A1Q8WWI5 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SLC44A1Q8WWI5 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
SLC44A1Q8WWI5 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
SLC44A1Q8WWI5 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
SLC44A1Q8WWI5 AL136131.1-201ENST00000406079 803 ntBASIC4.82□□□□□ -1.64
SLC44A1Q8WWI5 UBE2V1P11-201ENST00000411559 285 ntBASIC4.82□□□□□ -1.64
SLC44A1Q8WWI5 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC4.82□□□□□ -1.64
SLC44A1Q8WWI5 OR51A6P-201ENST00000418680 1004 ntBASIC4.82□□□□□ -1.64
SLC44A1Q8WWI5 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC4.82□□□□□ -1.64
SLC44A1Q8WWI5 MTCYBP32-201ENST00000427945 1084 ntBASIC4.82□□□□□ -1.64
SLC44A1Q8WWI5 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC4.82□□□□□ -1.64
SLC44A1Q8WWI5 RPS17P8-201ENST00000434525 335 ntBASIC4.82□□□□□ -1.64
SLC44A1Q8WWI5 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC4.82□□□□□ -1.64
SLC44A1Q8WWI5 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC4.82□□□□□ -1.64
SLC44A1Q8WWI5 HMGB1P26-201ENST00000452520 628 ntBASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms