Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 MTND5P23-201ENST00000430812 1655 ntBASIC4.84□□□□□ -1.63
CCDC112Q8NEF3 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CCDC112Q8NEF3 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CCDC112Q8NEF3 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CCDC112Q8NEF3 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
CCDC112Q8NEF3 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
CCDC112Q8NEF3 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.84□□□□□ -1.63
CCDC112Q8NEF3 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC4.84□□□□□ -1.63
CCDC112Q8NEF3 AC012671.1-201ENST00000451912 203 ntBASIC4.84□□□□□ -1.63
CCDC112Q8NEF3 AC104849.1-201ENST00000462623 405 ntBASIC4.84□□□□□ -1.63
CCDC112Q8NEF3 RPL23AP71-201ENST00000470966 469 ntBASIC4.84□□□□□ -1.63
CCDC112Q8NEF3 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC4.84□□□□□ -1.63
CCDC112Q8NEF3 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC4.84□□□□□ -1.63
CCDC112Q8NEF3 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.84□□□□□ -1.63
CCDC112Q8NEF3 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.84□□□□□ -1.63
CCDC112Q8NEF3 BTF3P13-201ENST00000513224 490 ntBASIC4.84□□□□□ -1.63
CCDC112Q8NEF3 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.84□□□□□ -1.63
CCDC112Q8NEF3 UBE2FP2-201ENST00000566646 462 ntBASIC4.84□□□□□ -1.63
CCDC112Q8NEF3 AC091042.1-201ENST00000579213 173 ntBASIC4.84□□□□□ -1.63
CCDC112Q8NEF3 AC234771.5-201ENST00000600161 514 ntBASIC4.84□□□□□ -1.63
CCDC112Q8NEF3 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CCDC112Q8NEF3 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC4.84□□□□□ -1.63
CCDC112Q8NEF3 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CCDC112Q8NEF3 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.84□□□□□ -1.63
CCDC112Q8NEF3 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC4.84□□□□□ -1.64
CCDC112Q8NEF3 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.64
CCDC112Q8NEF3 AC132825.1-201ENST00000463573 2247 ntBASIC4.84□□□□□ -1.64
CCDC112Q8NEF3 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.64
CCDC112Q8NEF3 AL606537.1-201ENST00000607258 2011 ntBASIC4.84□□□□□ -1.64
CCDC112Q8NEF3 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CCDC112Q8NEF3 AC108467.2-201ENST00000617640 1597 ntBASIC4.83□□□□□ -1.64
CCDC112Q8NEF3 NAMPTP1-201ENST00000440465 2514 ntBASIC4.83□□□□□ -1.64
CCDC112Q8NEF3 RPS16P5-201ENST00000406501 404 ntBASIC4.83□□□□□ -1.64
CCDC112Q8NEF3 MIR1911-201ENST00000410783 80 ntBASIC4.83□□□□□ -1.64
CCDC112Q8NEF3 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC4.83□□□□□ -1.64
CCDC112Q8NEF3 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC4.83□□□□□ -1.64
CCDC112Q8NEF3 PTP4A1P1-201ENST00000420539 515 ntBASIC4.83□□□□□ -1.64
CCDC112Q8NEF3 RBMY1KP-201ENST00000423480 476 ntBASIC4.83□□□□□ -1.64
CCDC112Q8NEF3 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC4.83□□□□□ -1.64
CCDC112Q8NEF3 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.83□□□□□ -1.64
CCDC112Q8NEF3 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.83□□□□□ -1.64
CCDC112Q8NEF3 SNRPFP2-201ENST00000440710 251 ntBASIC4.83□□□□□ -1.64
CCDC112Q8NEF3 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.83□□□□□ -1.64
CCDC112Q8NEF3 HMGB3P22-202ENST00000451823 572 ntBASIC4.83□□□□□ -1.64
CCDC112Q8NEF3 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.83□□□□□ -1.64
CCDC112Q8NEF3 AC239798.3-201ENST00000454459 408 ntBASIC4.83□□□□□ -1.64
CCDC112Q8NEF3 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC4.83□□□□□ -1.64
CCDC112Q8NEF3 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC4.83□□□□□ -1.64
CCDC112Q8NEF3 AC007016.1-201ENST00000512110 244 ntBASIC4.83□□□□□ -1.64
CCDC112Q8NEF3 RNA5SP497-201ENST00000516081 97 ntBASIC4.83□□□□□ -1.64
CCDC112Q8NEF3 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.83□□□□□ -1.64
CCDC112Q8NEF3 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC4.83□□□□□ -1.64
CCDC112Q8NEF3 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.83□□□□□ -1.64
CCDC112Q8NEF3 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.83□□□□□ -1.64
CCDC112Q8NEF3 AL110118.1-201ENST00000553543 400 ntBASIC4.83□□□□□ -1.64
CCDC112Q8NEF3 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC4.83□□□□□ -1.64
CCDC112Q8NEF3 ZNF137P-201ENST00000456718 1920 ntBASIC4.83□□□□□ -1.64
CCDC112Q8NEF3 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
CCDC112Q8NEF3 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CCDC112Q8NEF3 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CCDC112Q8NEF3 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CCDC112Q8NEF3 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CCDC112Q8NEF3 AC017007.4-201ENST00000503353 1352 ntBASIC4.82□□□□□ -1.64
CCDC112Q8NEF3 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.82□□□□□ -1.64
CCDC112Q8NEF3 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CCDC112Q8NEF3 SNORA71.2-201ENST00000364941 134 ntBASIC4.82□□□□□ -1.64
CCDC112Q8NEF3 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CCDC112Q8NEF3 HMGB1P32-201ENST00000425971 565 ntBASIC4.82□□□□□ -1.64
CCDC112Q8NEF3 AC007559.1-201ENST00000428736 355 ntBASIC4.82□□□□□ -1.64
CCDC112Q8NEF3 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.82□□□□□ -1.64
CCDC112Q8NEF3 RPEP2-201ENST00000432149 701 ntBASIC4.82□□□□□ -1.64
CCDC112Q8NEF3 NAP1L4P3-201ENST00000432820 1147 ntBASIC4.82□□□□□ -1.64
CCDC112Q8NEF3 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.82□□□□□ -1.64
CCDC112Q8NEF3 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.82□□□□□ -1.64
CCDC112Q8NEF3 OR1H1P-201ENST00000448731 937 ntBASIC4.82□□□□□ -1.64
CCDC112Q8NEF3 OR52J1P-201ENST00000450596 932 ntBASIC4.82□□□□□ -1.64
CCDC112Q8NEF3 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC4.82□□□□□ -1.64
CCDC112Q8NEF3 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC4.82□□□□□ -1.64
CCDC112Q8NEF3 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC4.82□□□□□ -1.64
CCDC112Q8NEF3 AC063943.1-201ENST00000465434 453 ntBASIC4.82□□□□□ -1.64
CCDC112Q8NEF3 RN7SL585P-201ENST00000470538 280 ntBASIC4.82□□□□□ -1.64
CCDC112Q8NEF3 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC4.82□□□□□ -1.64
CCDC112Q8NEF3 AC098583.1-201ENST00000480875 255 ntBASIC4.82□□□□□ -1.64
CCDC112Q8NEF3 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.82□□□□□ -1.64
CCDC112Q8NEF3 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.82□□□□□ -1.64
CCDC112Q8NEF3 RAB9BP1-201ENST00000519581 626 ntBASIC4.82□□□□□ -1.64
CCDC112Q8NEF3 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC4.82□□□□□ -1.64
CCDC112Q8NEF3 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC4.82□□□□□ -1.64
CCDC112Q8NEF3 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.82□□□□□ -1.64
CCDC112Q8NEF3 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.82□□□□□ -1.64
CCDC112Q8NEF3 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.82□□□□□ -1.64
CCDC112Q8NEF3 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC4.82□□□□□ -1.64
CCDC112Q8NEF3 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4.82□□□□□ -1.64
CCDC112Q8NEF3 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC4.82□□□□□ -1.64
CCDC112Q8NEF3 AL512782.1-201ENST00000603093 364 ntBASIC4.82□□□□□ -1.64
CCDC112Q8NEF3 AC131238.1-201ENST00000617135 328 ntBASIC4.82□□□□□ -1.64
CCDC112Q8NEF3 AC105105.5-201ENST00000622635 1294 ntBASIC4.82□□□□□ -1.64
CCDC112Q8NEF3 AC008785.1-201ENST00000624475 456 ntBASIC4.82□□□□□ -1.64
CCDC112Q8NEF3 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CCDC112Q8NEF3 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms