Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.93□□□□□ -1.62
CCDC65Q8IXS2 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC4.93□□□□□ -1.62
CCDC65Q8IXS2 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC4.93□□□□□ -1.62
CCDC65Q8IXS2 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.93□□□□□ -1.62
CCDC65Q8IXS2 AL353597.2-202ENST00000434901 373 ntBASIC4.93□□□□□ -1.62
CCDC65Q8IXS2 AC022431.1-201ENST00000450941 438 ntBASIC4.93□□□□□ -1.62
CCDC65Q8IXS2 OR52A4P-201ENST00000472867 958 ntBASIC4.93□□□□□ -1.62
CCDC65Q8IXS2 RPL23AP72-201ENST00000492447 435 ntBASIC4.93□□□□□ -1.62
CCDC65Q8IXS2 AC008897.1-201ENST00000494006 347 ntBASIC4.93□□□□□ -1.62
CCDC65Q8IXS2 PRELID3BP7-201ENST00000503606 469 ntBASIC4.93□□□□□ -1.62
CCDC65Q8IXS2 AC021146.3-201ENST00000511911 260 ntBASIC4.93□□□□□ -1.62
CCDC65Q8IXS2 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC4.93□□□□□ -1.62
CCDC65Q8IXS2 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC4.93□□□□□ -1.62
CCDC65Q8IXS2 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.93□□□□□ -1.62
CCDC65Q8IXS2 AC068446.3-201ENST00000555285 382 ntBASIC4.93□□□□□ -1.62
CCDC65Q8IXS2 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC4.93□□□□□ -1.62
CCDC65Q8IXS2 AC084783.1-201ENST00000565846 910 ntBASIC4.93□□□□□ -1.62
CCDC65Q8IXS2 MIR6891-201ENST00000618788 93 ntBASIC4.93□□□□□ -1.62
CCDC65Q8IXS2 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.93□□□□□ -1.62
CCDC65Q8IXS2 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CCDC65Q8IXS2 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CCDC65Q8IXS2 KPNA2P2-201ENST00000419546 1489 ntBASIC4.93□□□□□ -1.62
CCDC65Q8IXS2 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.93□□□□□ -1.62
CCDC65Q8IXS2 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.92□□□□□ -1.62
CCDC65Q8IXS2 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CCDC65Q8IXS2 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.92□□□□□ -1.62
CCDC65Q8IXS2 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
CCDC65Q8IXS2 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
CCDC65Q8IXS2 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.92□□□□□ -1.62
CCDC65Q8IXS2 AC010300.1-201ENST00000600671 5134 ntBASIC4.92□□□□□ -1.62
CCDC65Q8IXS2 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
CCDC65Q8IXS2 Z73965.1-201ENST00000623412 2297 ntBASIC4.92□□□□□ -1.62
CCDC65Q8IXS2 IL6STP1-201ENST00000346911 1020 ntBASIC4.92□□□□□ -1.62
CCDC65Q8IXS2 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC4.92□□□□□ -1.62
CCDC65Q8IXS2 MIR365B-201ENST00000362317 111 ntBASIC4.92□□□□□ -1.62
CCDC65Q8IXS2 RNU6-1263P-201ENST00000384601 106 ntBASIC4.92□□□□□ -1.62
CCDC65Q8IXS2 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
CCDC65Q8IXS2 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
CCDC65Q8IXS2 RPS3AP23-201ENST00000401762 784 ntBASIC4.92□□□□□ -1.62
CCDC65Q8IXS2 RN7SKP167-201ENST00000411047 285 ntBASIC4.92□□□□□ -1.62
CCDC65Q8IXS2 RPS20P14-201ENST00000412545 360 ntBASIC4.92□□□□□ -1.62
CCDC65Q8IXS2 RPL21P108-201ENST00000413857 481 ntBASIC4.92□□□□□ -1.62
CCDC65Q8IXS2 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC4.92□□□□□ -1.62
CCDC65Q8IXS2 AC119751.6-201ENST00000416712 186 ntBASIC4.92□□□□□ -1.62
CCDC65Q8IXS2 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.92□□□□□ -1.62
CCDC65Q8IXS2 UBTFL3-201ENST00000418934 1024 ntBASIC4.92□□□□□ -1.62
CCDC65Q8IXS2 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC4.92□□□□□ -1.62
CCDC65Q8IXS2 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.92□□□□□ -1.62
CCDC65Q8IXS2 UBE2V1P3-201ENST00000439651 417 ntBASIC4.92□□□□□ -1.62
CCDC65Q8IXS2 UBTFL6-201ENST00000477929 1024 ntBASIC4.92□□□□□ -1.62
CCDC65Q8IXS2 AC016687.1-201ENST00000482574 353 ntBASIC4.92□□□□□ -1.62
CCDC65Q8IXS2 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.92□□□□□ -1.62
CCDC65Q8IXS2 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.92□□□□□ -1.62
CCDC65Q8IXS2 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC4.92□□□□□ -1.62
CCDC65Q8IXS2 GLRXP2-201ENST00000555594 321 ntBASIC4.92□□□□□ -1.62
CCDC65Q8IXS2 AP005901.4-201ENST00000577336 569 ntBASIC4.92□□□□□ -1.62
CCDC65Q8IXS2 AP001160.4-201ENST00000596971 382 ntBASIC4.92□□□□□ -1.62
CCDC65Q8IXS2 VN1R81P-201ENST00000602085 372 ntBASIC4.92□□□□□ -1.62
CCDC65Q8IXS2 AC115286.1-201ENST00000604298 434 ntBASIC4.92□□□□□ -1.62
CCDC65Q8IXS2 AL713998.2-201ENST00000604538 1198 ntBASIC4.92□□□□□ -1.62
CCDC65Q8IXS2 AL160290.3-201ENST00000604869 165 ntBASIC4.92□□□□□ -1.62
CCDC65Q8IXS2 AC026979.4-201ENST00000606555 645 ntBASIC4.92□□□□□ -1.62
CCDC65Q8IXS2 Z98200.1-201ENST00000607298 470 ntBASIC4.92□□□□□ -1.62
CCDC65Q8IXS2 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.92□□□□□ -1.62
CCDC65Q8IXS2 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.92□□□□□ -1.62
CCDC65Q8IXS2 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
CCDC65Q8IXS2 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CCDC65Q8IXS2 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CCDC65Q8IXS2 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.92□□□□□ -1.62
CCDC65Q8IXS2 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
CCDC65Q8IXS2 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CCDC65Q8IXS2 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.92□□□□□ -1.62
CCDC65Q8IXS2 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.91□□□□□ -1.62
CCDC65Q8IXS2 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
CCDC65Q8IXS2 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CCDC65Q8IXS2 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.91□□□□□ -1.62
CCDC65Q8IXS2 RAD17P1-201ENST00000418130 2042 ntBASIC4.91□□□□□ -1.62
CCDC65Q8IXS2 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CCDC65Q8IXS2 RNA5SP502-201ENST00000362694 119 ntBASIC4.91□□□□□ -1.62
CCDC65Q8IXS2 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CCDC65Q8IXS2 HDGFP1-201ENST00000405943 252 ntBASIC4.91□□□□□ -1.62
CCDC65Q8IXS2 SNRPFP1-201ENST00000414761 252 ntBASIC4.91□□□□□ -1.62
CCDC65Q8IXS2 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC4.91□□□□□ -1.62
CCDC65Q8IXS2 AC069213.2-201ENST00000420238 366 ntBASIC4.91□□□□□ -1.62
CCDC65Q8IXS2 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.91□□□□□ -1.62
CCDC65Q8IXS2 RAB9AP5-201ENST00000437794 597 ntBASIC4.91□□□□□ -1.62
CCDC65Q8IXS2 AC011753.3-201ENST00000443436 406 ntBASIC4.91□□□□□ -1.62
CCDC65Q8IXS2 RAB9AP2-201ENST00000443911 597 ntBASIC4.91□□□□□ -1.62
CCDC65Q8IXS2 AL121877.1-201ENST00000453704 622 ntBASIC4.91□□□□□ -1.62
CCDC65Q8IXS2 PSMC1P13-201ENST00000458195 985 ntBASIC4.91□□□□□ -1.62
CCDC65Q8IXS2 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
CCDC65Q8IXS2 AC053481.1-201ENST00000467217 306 ntBASIC4.91□□□□□ -1.62
CCDC65Q8IXS2 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC4.91□□□□□ -1.62
CCDC65Q8IXS2 F11-205ENST00000492972 1204 ntTSL 2 BASIC4.91□□□□□ -1.62
CCDC65Q8IXS2 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.91□□□□□ -1.62
CCDC65Q8IXS2 MTHFD2P4-201ENST00000515074 1025 ntBASIC4.91□□□□□ -1.62
CCDC65Q8IXS2 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CCDC65Q8IXS2 MEG8-217ENST00000556637 924 ntTSL 5 BASIC4.91□□□□□ -1.62
CCDC65Q8IXS2 RPL23AP97-201ENST00000568955 471 ntBASIC4.91□□□□□ -1.62
CCDC65Q8IXS2 AC007448.1-201ENST00000582714 234 ntBASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms