Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC4.4□□□□□ -1.71
NUDCD3Q8IVD9 AL110118.1-201ENST00000553543 400 ntBASIC4.4□□□□□ -1.71
NUDCD3Q8IVD9 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC4.4□□□□□ -1.71
NUDCD3Q8IVD9 RN7SL753P-201ENST00000581238 290 ntBASIC4.4□□□□□ -1.71
NUDCD3Q8IVD9 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.4□□□□□ -1.71
NUDCD3Q8IVD9 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.4□□□□□ -1.71
NUDCD3Q8IVD9 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.4□□□□□ -1.71
NUDCD3Q8IVD9 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.4□□□□□ -1.71
NUDCD3Q8IVD9 SNX6P1-201ENST00000601728 1224 ntBASIC4.4□□□□□ -1.71
NUDCD3Q8IVD9 AC008638.3-201ENST00000603341 463 ntBASIC4.4□□□□□ -1.71
NUDCD3Q8IVD9 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC4.4□□□□□ -1.71
NUDCD3Q8IVD9 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
NUDCD3Q8IVD9 C4BPAP1-201ENST00000415474 1893 ntBASIC4.4□□□□□ -1.71
NUDCD3Q8IVD9 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.4□□□□□ -1.71
NUDCD3Q8IVD9 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.4□□□□□ -1.71
NUDCD3Q8IVD9 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.4□□□□□ -1.71
NUDCD3Q8IVD9 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC4.4□□□□□ -1.71
NUDCD3Q8IVD9 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC4.4□□□□□ -1.71
NUDCD3Q8IVD9 AC018529.3-201ENST00000624212 2254 ntBASIC4.39□□□□□ -1.71
NUDCD3Q8IVD9 AC087565.3-202ENST00000642085 1603 ntBASIC4.39□□□□□ -1.71
NUDCD3Q8IVD9 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.39□□□□□ -1.71
NUDCD3Q8IVD9 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.39□□□□□ -1.71
NUDCD3Q8IVD9 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
NUDCD3Q8IVD9 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.39□□□□□ -1.71
NUDCD3Q8IVD9 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
NUDCD3Q8IVD9 MIR765-201ENST00000390226 114 ntBASIC4.39□□□□□ -1.71
NUDCD3Q8IVD9 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.39□□□□□ -1.71
NUDCD3Q8IVD9 MTCYBP7-201ENST00000419540 1134 ntBASIC4.39□□□□□ -1.71
NUDCD3Q8IVD9 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
NUDCD3Q8IVD9 RPEP2-201ENST00000432149 701 ntBASIC4.39□□□□□ -1.71
NUDCD3Q8IVD9 Z85994.2-201ENST00000434327 452 ntBASIC4.39□□□□□ -1.71
NUDCD3Q8IVD9 RPS20P1-201ENST00000434853 354 ntBASIC4.39□□□□□ -1.71
NUDCD3Q8IVD9 ABCF2P2-201ENST00000450549 296 ntBASIC4.39□□□□□ -1.71
NUDCD3Q8IVD9 AC069277.2-201ENST00000454211 432 ntBASIC4.39□□□□□ -1.71
NUDCD3Q8IVD9 AC006499.3-201ENST00000506077 748 ntBASIC4.39□□□□□ -1.71
NUDCD3Q8IVD9 RNA5SP497-201ENST00000516081 97 ntBASIC4.39□□□□□ -1.71
NUDCD3Q8IVD9 RN7SKP276-201ENST00000516242 268 ntBASIC4.39□□□□□ -1.71
NUDCD3Q8IVD9 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.39□□□□□ -1.71
NUDCD3Q8IVD9 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.39□□□□□ -1.71
NUDCD3Q8IVD9 OR5M7P-201ENST00000526140 972 ntBASIC4.39□□□□□ -1.71
NUDCD3Q8IVD9 AC021006.3-201ENST00000530771 192 ntBASIC4.39□□□□□ -1.71
NUDCD3Q8IVD9 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC4.39□□□□□ -1.71
NUDCD3Q8IVD9 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
NUDCD3Q8IVD9 OR1F2P-201ENST00000570470 933 ntBASIC4.39□□□□□ -1.71
NUDCD3Q8IVD9 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC4.39□□□□□ -1.71
NUDCD3Q8IVD9 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC4.39□□□□□ -1.71
NUDCD3Q8IVD9 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.39□□□□□ -1.71
NUDCD3Q8IVD9 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC4.39□□□□□ -1.71
NUDCD3Q8IVD9 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC4.39□□□□□ -1.71
NUDCD3Q8IVD9 BANCR-201ENST00000624238 473 ntTSL 2 BASIC4.39□□□□□ -1.71
NUDCD3Q8IVD9 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
NUDCD3Q8IVD9 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.39□□□□□ -1.71
NUDCD3Q8IVD9 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
NUDCD3Q8IVD9 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC4.39□□□□□ -1.71
NUDCD3Q8IVD9 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
NUDCD3Q8IVD9 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
NUDCD3Q8IVD9 AC016588.2-201ENST00000632484 3021 ntBASIC4.38□□□□□ -1.71
NUDCD3Q8IVD9 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
NUDCD3Q8IVD9 INTS6P1-201ENST00000504674 2530 ntBASIC4.38□□□□□ -1.71
NUDCD3Q8IVD9 AP000756.2-201ENST00000624168 2567 ntBASIC4.38□□□□□ -1.71
NUDCD3Q8IVD9 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.38□□□□□ -1.71
NUDCD3Q8IVD9 AC021146.4-201ENST00000309229 279 ntBASIC4.38□□□□□ -1.71
NUDCD3Q8IVD9 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
NUDCD3Q8IVD9 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC4.38□□□□□ -1.71
NUDCD3Q8IVD9 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
NUDCD3Q8IVD9 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
NUDCD3Q8IVD9 RNA5SP305-201ENST00000362665 119 ntBASIC4.38□□□□□ -1.71
NUDCD3Q8IVD9 RNU4-23P-201ENST00000362839 140 ntBASIC4.38□□□□□ -1.71
NUDCD3Q8IVD9 RNU6-984P-201ENST00000363236 109 ntBASIC4.38□□□□□ -1.71
NUDCD3Q8IVD9 RNU6-670P-201ENST00000364312 104 ntBASIC4.38□□□□□ -1.71
NUDCD3Q8IVD9 RNU4-7P-201ENST00000364758 141 ntBASIC4.38□□□□□ -1.71
NUDCD3Q8IVD9 MIR708-201ENST00000390708 88 ntBASIC4.38□□□□□ -1.71
NUDCD3Q8IVD9 SDHCP2-201ENST00000398565 501 ntBASIC4.38□□□□□ -1.71
NUDCD3Q8IVD9 OR1F12-201ENST00000402365 945 ntBASIC4.38□□□□□ -1.71
NUDCD3Q8IVD9 MIR1911-201ENST00000410783 80 ntBASIC4.38□□□□□ -1.71
NUDCD3Q8IVD9 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.38□□□□□ -1.71
NUDCD3Q8IVD9 RPS12P5-201ENST00000423449 371 ntBASIC4.38□□□□□ -1.71
NUDCD3Q8IVD9 NPM1P26-201ENST00000426339 738 ntBASIC4.38□□□□□ -1.71
NUDCD3Q8IVD9 AL158073.1-201ENST00000426848 1104 ntBASIC4.38□□□□□ -1.71
NUDCD3Q8IVD9 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.38□□□□□ -1.71
NUDCD3Q8IVD9 RBMY2QP-201ENST00000429799 1147 ntBASIC4.38□□□□□ -1.71
NUDCD3Q8IVD9 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
NUDCD3Q8IVD9 TPTE2P1-204ENST00000435256 593 ntBASIC4.38□□□□□ -1.71
NUDCD3Q8IVD9 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.38□□□□□ -1.71
NUDCD3Q8IVD9 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.38□□□□□ -1.71
NUDCD3Q8IVD9 AL353748.1-201ENST00000440753 474 ntBASIC4.38□□□□□ -1.71
NUDCD3Q8IVD9 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.38□□□□□ -1.71
NUDCD3Q8IVD9 RPL31P20-201ENST00000449593 360 ntBASIC4.38□□□□□ -1.71
NUDCD3Q8IVD9 AL162388.1-201ENST00000450912 352 ntBASIC4.38□□□□□ -1.71
NUDCD3Q8IVD9 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC4.38□□□□□ -1.71
NUDCD3Q8IVD9 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC4.38□□□□□ -1.71
NUDCD3Q8IVD9 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC4.38□□□□□ -1.71
NUDCD3Q8IVD9 SOX5P1-201ENST00000524155 1127 ntBASIC4.38□□□□□ -1.71
NUDCD3Q8IVD9 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC4.38□□□□□ -1.71
NUDCD3Q8IVD9 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.38□□□□□ -1.71
NUDCD3Q8IVD9 AC068446.3-201ENST00000555285 382 ntBASIC4.38□□□□□ -1.71
NUDCD3Q8IVD9 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.38□□□□□ -1.71
NUDCD3Q8IVD9 AC124068.1-201ENST00000563131 678 ntBASIC4.38□□□□□ -1.71
NUDCD3Q8IVD9 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.38□□□□□ -1.71
NUDCD3Q8IVD9 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms