Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
SCXQ7RTU7 SNORD65-201ENST00000391079 73 ntBASIC3.12□□□□□ -1.91
SCXQ7RTU7 ATP5HP3-201ENST00000396994 486 ntBASIC3.12□□□□□ -1.91
SCXQ7RTU7 MIR298-201ENST00000401212 88 ntBASIC3.12□□□□□ -1.91
SCXQ7RTU7 RPL23AP48-201ENST00000406913 488 ntBASIC3.12□□□□□ -1.91
SCXQ7RTU7 RAB28P1-201ENST00000411517 641 ntBASIC3.12□□□□□ -1.91
SCXQ7RTU7 AC069213.2-201ENST00000420238 366 ntBASIC3.12□□□□□ -1.91
SCXQ7RTU7 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
SCXQ7RTU7 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC3.12□□□□□ -1.91
SCXQ7RTU7 DNAJC19P7-201ENST00000428811 344 ntBASIC3.12□□□□□ -1.91
SCXQ7RTU7 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC3.12□□□□□ -1.91
SCXQ7RTU7 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC3.12□□□□□ -1.91
SCXQ7RTU7 TXNP5-201ENST00000441043 315 ntBASIC3.12□□□□□ -1.91
SCXQ7RTU7 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC3.12□□□□□ -1.91
SCXQ7RTU7 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC3.12□□□□□ -1.91
SCXQ7RTU7 AURKAPS2-201ENST00000454983 333 ntBASIC3.12□□□□□ -1.91
SCXQ7RTU7 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
SCXQ7RTU7 CREM-226ENST00000469949 721 ntTSL 3 BASIC3.12□□□□□ -1.91
SCXQ7RTU7 NDUFA5P9-201ENST00000472609 340 ntBASIC3.12□□□□□ -1.91
SCXQ7RTU7 RN7SL481P-201ENST00000477764 299 ntBASIC3.12□□□□□ -1.91
SCXQ7RTU7 AC011005.3-201ENST00000491624 395 ntBASIC3.12□□□□□ -1.91
SCXQ7RTU7 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC3.12□□□□□ -1.91
SCXQ7RTU7 RN7SKP276-201ENST00000516242 268 ntBASIC3.12□□□□□ -1.91
SCXQ7RTU7 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC3.12□□□□□ -1.91
SCXQ7RTU7 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC3.12□□□□□ -1.91
SCXQ7RTU7 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC3.12□□□□□ -1.91
SCXQ7RTU7 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC3.12□□□□□ -1.91
SCXQ7RTU7 NDUFB4P11-201ENST00000560510 395 ntBASIC3.12□□□□□ -1.91
SCXQ7RTU7 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC3.12□□□□□ -1.91
SCXQ7RTU7 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC3.12□□□□□ -1.91
SCXQ7RTU7 RN7SL176P-201ENST00000580352 264 ntBASIC3.12□□□□□ -1.91
SCXQ7RTU7 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC3.12□□□□□ -1.91
SCXQ7RTU7 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC3.12□□□□□ -1.91
SCXQ7RTU7 BMS1P7-201ENST00000602440 1052 ntBASIC3.12□□□□□ -1.91
SCXQ7RTU7 AC068790.4-201ENST00000602474 263 ntBASIC3.12□□□□□ -1.91
SCXQ7RTU7 AC008745.1-201ENST00000604064 271 ntBASIC3.12□□□□□ -1.91
SCXQ7RTU7 AL139286.1-201ENST00000604465 483 ntBASIC3.12□□□□□ -1.91
SCXQ7RTU7 AL096803.3-201ENST00000609032 532 ntBASIC3.12□□□□□ -1.91
SCXQ7RTU7 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC3.12□□□□□ -1.91
SCXQ7RTU7 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC3.12□□□□□ -1.91
SCXQ7RTU7 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC3.12□□□□□ -1.91
SCXQ7RTU7 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC3.12□□□□□ -1.91
SCXQ7RTU7 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC3.12□□□□□ -1.91
SCXQ7RTU7 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
SCXQ7RTU7 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
SCXQ7RTU7 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
SCXQ7RTU7 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
SCXQ7RTU7 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
SCXQ7RTU7 AC087565.3-202ENST00000642085 1603 ntBASIC3.11□□□□□ -1.91
SCXQ7RTU7 AC022893.2-201ENST00000564832 3296 ntBASIC3.11□□□□□ -1.91
SCXQ7RTU7 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.11□□□□□ -1.91
SCXQ7RTU7 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
SCXQ7RTU7 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC3.11□□□□□ -1.91
SCXQ7RTU7 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC3.11□□□□□ -1.91
SCXQ7RTU7 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
SCXQ7RTU7 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
SCXQ7RTU7 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
SCXQ7RTU7 AC079741.1-201ENST00000321498 212 ntBASIC3.11□□□□□ -1.91
SCXQ7RTU7 RNU1-94P-201ENST00000362627 173 ntBASIC3.11□□□□□ -1.91
SCXQ7RTU7 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
SCXQ7RTU7 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
SCXQ7RTU7 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
SCXQ7RTU7 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC3.11□□□□□ -1.91
SCXQ7RTU7 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
SCXQ7RTU7 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC3.11□□□□□ -1.91
SCXQ7RTU7 CASKP1-201ENST00000412870 582 ntBASIC3.11□□□□□ -1.91
SCXQ7RTU7 BX510359.2-201ENST00000417920 305 ntBASIC3.11□□□□□ -1.91
SCXQ7RTU7 CYCSP10-201ENST00000417973 294 ntBASIC3.11□□□□□ -1.91
SCXQ7RTU7 AC004690.1-201ENST00000418216 328 ntBASIC3.11□□□□□ -1.91
SCXQ7RTU7 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC3.11□□□□□ -1.91
SCXQ7RTU7 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC3.11□□□□□ -1.91
SCXQ7RTU7 GTF2IP2-201ENST00000424290 697 ntBASIC3.11□□□□□ -1.91
SCXQ7RTU7 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC3.11□□□□□ -1.91
SCXQ7RTU7 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC3.11□□□□□ -1.91
SCXQ7RTU7 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC3.11□□□□□ -1.91
SCXQ7RTU7 RPL31P20-201ENST00000449593 360 ntBASIC3.11□□□□□ -1.91
SCXQ7RTU7 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC3.11□□□□□ -1.91
SCXQ7RTU7 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC3.11□□□□□ -1.91
SCXQ7RTU7 HMGN1P8-201ENST00000463578 288 ntBASIC3.11□□□□□ -1.91
SCXQ7RTU7 AC005412.2-201ENST00000492004 341 ntBASIC3.11□□□□□ -1.91
SCXQ7RTU7 RN7SL441P-201ENST00000492388 296 ntBASIC3.11□□□□□ -1.91
SCXQ7RTU7 EEF1A1P25-201ENST00000495704 1267 ntBASIC3.11□□□□□ -1.91
SCXQ7RTU7 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC3.11□□□□□ -1.91
SCXQ7RTU7 KRTAP5-14P-201ENST00000502328 121 ntBASIC3.11□□□□□ -1.91
SCXQ7RTU7 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
SCXQ7RTU7 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC3.11□□□□□ -1.91
SCXQ7RTU7 AC093720.1-201ENST00000505681 714 ntBASIC3.11□□□□□ -1.91
SCXQ7RTU7 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC3.11□□□□□ -1.91
SCXQ7RTU7 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC3.11□□□□□ -1.91
SCXQ7RTU7 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC3.11□□□□□ -1.91
SCXQ7RTU7 RNA5SP497-201ENST00000516081 97 ntBASIC3.11□□□□□ -1.91
SCXQ7RTU7 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC3.11□□□□□ -1.91
SCXQ7RTU7 SEC11B-201ENST00000518383 499 ntBASIC3.11□□□□□ -1.91
SCXQ7RTU7 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC3.11□□□□□ -1.91
SCXQ7RTU7 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC3.11□□□□□ -1.91
SCXQ7RTU7 SOX5P1-201ENST00000524155 1127 ntBASIC3.11□□□□□ -1.91
SCXQ7RTU7 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
SCXQ7RTU7 CYCSP40-201ENST00000575927 294 ntBASIC3.11□□□□□ -1.91
SCXQ7RTU7 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC3.11□□□□□ -1.91
SCXQ7RTU7 MYLK-221ENST00000583087 678 ntTSL 4 BASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 141.4 ms