Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 AC012557.2-201ENST00000605919 418 ntBASIC5.57□□□□□ -1.52
SLC44A4Q53GD3 AC090116.1-201ENST00000615679 446 ntBASIC5.57□□□□□ -1.52
SLC44A4Q53GD3 AC099494.2-201ENST00000623371 978 ntBASIC5.57□□□□□ -1.52
SLC44A4Q53GD3 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.57□□□□□ -1.52
SLC44A4Q53GD3 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.57□□□□□ -1.52
SLC44A4Q53GD3 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SLC44A4Q53GD3 AC068870.1-201ENST00000563737 2455 ntBASIC5.57□□□□□ -1.52
SLC44A4Q53GD3 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SLC44A4Q53GD3 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SLC44A4Q53GD3 PANDAR-201ENST00000629595 1506 ntBASIC5.57□□□□□ -1.52
SLC44A4Q53GD3 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC5.57□□□□□ -1.52
SLC44A4Q53GD3 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.57□□□□□ -1.52
SLC44A4Q53GD3 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.57□□□□□ -1.52
SLC44A4Q53GD3 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.57□□□□□ -1.52
SLC44A4Q53GD3 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SLC44A4Q53GD3 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
SLC44A4Q53GD3 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.57□□□□□ -1.52
SLC44A4Q53GD3 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.56□□□□□ -1.52
SLC44A4Q53GD3 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
SLC44A4Q53GD3 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SLC44A4Q53GD3 SEC63P2-201ENST00000503863 1939 ntBASIC5.56□□□□□ -1.52
SLC44A4Q53GD3 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SLC44A4Q53GD3 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.56□□□□□ -1.52
SLC44A4Q53GD3 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SLC44A4Q53GD3 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
SLC44A4Q53GD3 RNA5SP326-201ENST00000363209 110 ntBASIC5.56□□□□□ -1.52
SLC44A4Q53GD3 RNA5SP123-201ENST00000363244 119 ntBASIC5.56□□□□□ -1.52
SLC44A4Q53GD3 RNU4-51P-201ENST00000364206 140 ntBASIC5.56□□□□□ -1.52
SLC44A4Q53GD3 RNU4-28P-201ENST00000364739 141 ntBASIC5.56□□□□□ -1.52
SLC44A4Q53GD3 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC5.56□□□□□ -1.52
SLC44A4Q53GD3 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC5.56□□□□□ -1.52
SLC44A4Q53GD3 CYB5AP4-201ENST00000396692 399 ntBASIC5.56□□□□□ -1.52
SLC44A4Q53GD3 FABP12P1-201ENST00000401911 322 ntBASIC5.56□□□□□ -1.52
SLC44A4Q53GD3 HNRNPDP2-201ENST00000406475 478 ntBASIC5.56□□□□□ -1.52
SLC44A4Q53GD3 OR4K12P-201ENST00000406538 961 ntBASIC5.56□□□□□ -1.52
SLC44A4Q53GD3 RNA5SP487-201ENST00000410186 122 ntBASIC5.56□□□□□ -1.52
SLC44A4Q53GD3 RNA5SP296-201ENST00000410523 111 ntBASIC5.56□□□□□ -1.52
SLC44A4Q53GD3 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC5.56□□□□□ -1.52
SLC44A4Q53GD3 RNF10P1-201ENST00000418589 369 ntBASIC5.56□□□□□ -1.52
SLC44A4Q53GD3 AL513175.2-201ENST00000422071 443 ntBASIC5.56□□□□□ -1.52
SLC44A4Q53GD3 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC5.56□□□□□ -1.52
SLC44A4Q53GD3 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC5.56□□□□□ -1.52
SLC44A4Q53GD3 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.56□□□□□ -1.52
SLC44A4Q53GD3 MOB1AP1-201ENST00000430903 535 ntBASIC5.56□□□□□ -1.52
SLC44A4Q53GD3 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.56□□□□□ -1.52
SLC44A4Q53GD3 HMGB1P45-201ENST00000435986 653 ntBASIC5.56□□□□□ -1.52
SLC44A4Q53GD3 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC5.56□□□□□ -1.52
SLC44A4Q53GD3 EEF1A1P39-201ENST00000440791 250 ntBASIC5.56□□□□□ -1.52
SLC44A4Q53GD3 AL592437.1-201ENST00000443781 492 ntBASIC5.56□□□□□ -1.52
SLC44A4Q53GD3 AL672138.1-201ENST00000450604 1015 ntBASIC5.56□□□□□ -1.52
SLC44A4Q53GD3 RPS6P2-201ENST00000454208 705 ntBASIC5.56□□□□□ -1.52
SLC44A4Q53GD3 CDC42P1-201ENST00000456658 548 ntBASIC5.56□□□□□ -1.52
SLC44A4Q53GD3 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC5.56□□□□□ -1.52
SLC44A4Q53GD3 AC096741.1-201ENST00000472250 846 ntBASIC5.56□□□□□ -1.52
SLC44A4Q53GD3 RPL7P40-201ENST00000481703 745 ntBASIC5.56□□□□□ -1.52
SLC44A4Q53GD3 AC004980.4-201ENST00000513375 203 ntBASIC5.56□□□□□ -1.52
SLC44A4Q53GD3 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC5.56□□□□□ -1.52
SLC44A4Q53GD3 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.56□□□□□ -1.52
SLC44A4Q53GD3 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC5.56□□□□□ -1.52
SLC44A4Q53GD3 MTCO1P47-201ENST00000523889 1271 ntBASIC5.56□□□□□ -1.52
SLC44A4Q53GD3 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC5.56□□□□□ -1.52
SLC44A4Q53GD3 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
SLC44A4Q53GD3 SETP1-201ENST00000556014 845 ntBASIC5.56□□□□□ -1.52
SLC44A4Q53GD3 PDCD6IPP2-207ENST00000566321 1069 ntBASIC5.56□□□□□ -1.52
SLC44A4Q53GD3 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC5.56□□□□□ -1.52
SLC44A4Q53GD3 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.56□□□□□ -1.52
SLC44A4Q53GD3 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.56□□□□□ -1.52
SLC44A4Q53GD3 MIR4330-201ENST00000579077 105 ntBASIC5.56□□□□□ -1.52
SLC44A4Q53GD3 MIR4472-2-201ENST00000582069 67 ntBASIC5.56□□□□□ -1.52
SLC44A4Q53GD3 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC5.56□□□□□ -1.52
SLC44A4Q53GD3 AC060780.2-201ENST00000589047 198 ntBASIC5.56□□□□□ -1.52
SLC44A4Q53GD3 VN1R78P-201ENST00000597393 564 ntBASIC5.56□□□□□ -1.52
SLC44A4Q53GD3 AC125494.3-201ENST00000602759 455 ntBASIC5.56□□□□□ -1.52
SLC44A4Q53GD3 STMN1P1-201ENST00000617809 440 ntBASIC5.56□□□□□ -1.52
SLC44A4Q53GD3 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SLC44A4Q53GD3 AC024595.1-201ENST00000623088 387 ntBASIC5.56□□□□□ -1.52
SLC44A4Q53GD3 AC005618.4-201ENST00000625053 554 ntBASIC5.56□□□□□ -1.52
SLC44A4Q53GD3 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC5.56□□□□□ -1.52
SLC44A4Q53GD3 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC5.56□□□□□ -1.52
SLC44A4Q53GD3 GMFB-210ENST00000628554 639 ntTSL 4 BASIC5.56□□□□□ -1.52
SLC44A4Q53GD3 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.56□□□□□ -1.52
SLC44A4Q53GD3 AC093311.1-201ENST00000506586 2021 ntBASIC5.56□□□□□ -1.52
SLC44A4Q53GD3 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
SLC44A4Q53GD3 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SLC44A4Q53GD3 AC083843.2-201ENST00000568248 6253 ntBASIC5.56□□□□□ -1.52
SLC44A4Q53GD3 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
SLC44A4Q53GD3 AL022393.1-201ENST00000625142 1677 ntBASIC5.56□□□□□ -1.52
SLC44A4Q53GD3 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SLC44A4Q53GD3 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.56□□□□□ -1.52
SLC44A4Q53GD3 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SLC44A4Q53GD3 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
SLC44A4Q53GD3 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SLC44A4Q53GD3 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SLC44A4Q53GD3 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SLC44A4Q53GD3 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
SLC44A4Q53GD3 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.55□□□□□ -1.52
SLC44A4Q53GD3 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SLC44A4Q53GD3 SNORA62.2-201ENST00000364672 152 ntBASIC5.55□□□□□ -1.52
SLC44A4Q53GD3 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
SLC44A4Q53GD3 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms