Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.46□□□□□ -1.86
HIST1H1AQ02539 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC3.46□□□□□ -1.86
HIST1H1AQ02539 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
HIST1H1AQ02539 CR788268.1-201ENST00000603931 1809 ntBASIC3.46□□□□□ -1.86
HIST1H1AQ02539 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC3.46□□□□□ -1.86
HIST1H1AQ02539 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC3.45□□□□□ -1.86
HIST1H1AQ02539 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
HIST1H1AQ02539 MARK2P15-201ENST00000432204 2186 ntBASIC3.45□□□□□ -1.86
HIST1H1AQ02539 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.45□□□□□ -1.86
HIST1H1AQ02539 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC3.45□□□□□ -1.86
HIST1H1AQ02539 RNA5SP22-201ENST00000365393 109 ntBASIC3.45□□□□□ -1.86
HIST1H1AQ02539 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC3.45□□□□□ -1.86
HIST1H1AQ02539 SNORA51.8-201ENST00000384234 132 ntBASIC3.45□□□□□ -1.86
HIST1H1AQ02539 FCF1P5-201ENST00000406490 482 ntBASIC3.45□□□□□ -1.86
HIST1H1AQ02539 MIR1183-201ENST00000408856 89 ntBASIC3.45□□□□□ -1.86
HIST1H1AQ02539 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
HIST1H1AQ02539 RPL12P34-201ENST00000424532 479 ntBASIC3.45□□□□□ -1.86
HIST1H1AQ02539 CENPIP1-201ENST00000425713 902 ntBASIC3.45□□□□□ -1.86
HIST1H1AQ02539 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC3.45□□□□□ -1.86
HIST1H1AQ02539 ELOCP18-201ENST00000434209 337 ntBASIC3.45□□□□□ -1.86
HIST1H1AQ02539 AC016831.4-201ENST00000438302 307 ntBASIC3.45□□□□□ -1.86
HIST1H1AQ02539 AL935212.3-201ENST00000450729 284 ntBASIC3.45□□□□□ -1.86
HIST1H1AQ02539 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC3.45□□□□□ -1.86
HIST1H1AQ02539 AC018638.3-201ENST00000461273 132 ntBASIC3.45□□□□□ -1.86
HIST1H1AQ02539 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC3.45□□□□□ -1.86
HIST1H1AQ02539 RPS26P15-201ENST00000488067 348 ntBASIC3.45□□□□□ -1.86
HIST1H1AQ02539 AC008897.1-201ENST00000494006 347 ntBASIC3.45□□□□□ -1.86
HIST1H1AQ02539 AC092045.1-201ENST00000495716 1231 ntBASIC3.45□□□□□ -1.86
HIST1H1AQ02539 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC3.45□□□□□ -1.86
HIST1H1AQ02539 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC3.45□□□□□ -1.86
HIST1H1AQ02539 AC015795.1-201ENST00000513669 327 ntBASIC3.45□□□□□ -1.86
HIST1H1AQ02539 RN7SKP276-201ENST00000516242 268 ntBASIC3.45□□□□□ -1.86
HIST1H1AQ02539 SCARNA21.2-201ENST00000516600 166 ntBASIC3.45□□□□□ -1.86
HIST1H1AQ02539 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC3.45□□□□□ -1.86
HIST1H1AQ02539 OR5M7P-201ENST00000526140 972 ntBASIC3.45□□□□□ -1.86
HIST1H1AQ02539 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC3.45□□□□□ -1.86
HIST1H1AQ02539 AC092851.1-201ENST00000535964 478 ntBASIC3.45□□□□□ -1.86
HIST1H1AQ02539 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
HIST1H1AQ02539 AC009117.1-201ENST00000563948 554 ntBASIC3.45□□□□□ -1.86
HIST1H1AQ02539 MIR4644-201ENST00000579929 84 ntBASIC3.45□□□□□ -1.86
HIST1H1AQ02539 AL512782.1-201ENST00000603093 364 ntBASIC3.45□□□□□ -1.86
HIST1H1AQ02539 AL031320.1-201ENST00000604177 357 ntBASIC3.45□□□□□ -1.86
HIST1H1AQ02539 AC016542.2-201ENST00000624201 619 ntBASIC3.45□□□□□ -1.86
HIST1H1AQ02539 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC3.45□□□□□ -1.86
HIST1H1AQ02539 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC3.45□□□□□ -1.86
HIST1H1AQ02539 AC083899.2-201ENST00000423285 1376 ntBASIC3.45□□□□□ -1.86
HIST1H1AQ02539 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
HIST1H1AQ02539 AC092079.1-201ENST00000558620 1985 ntBASIC3.45□□□□□ -1.86
HIST1H1AQ02539 AC007529.1-201ENST00000418574 2178 ntBASIC3.45□□□□□ -1.86
HIST1H1AQ02539 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.45□□□□□ -1.86
HIST1H1AQ02539 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.45□□□□□ -1.86
HIST1H1AQ02539 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC3.44□□□□□ -1.86
HIST1H1AQ02539 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
HIST1H1AQ02539 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC3.44□□□□□ -1.86
HIST1H1AQ02539 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
HIST1H1AQ02539 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC3.44□□□□□ -1.86
HIST1H1AQ02539 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
HIST1H1AQ02539 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
HIST1H1AQ02539 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
HIST1H1AQ02539 AC027287.1-201ENST00000553115 1453 ntBASIC3.44□□□□□ -1.86
HIST1H1AQ02539 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
HIST1H1AQ02539 XIAPP3-201ENST00000312918 795 ntBASIC3.44□□□□□ -1.86
HIST1H1AQ02539 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
HIST1H1AQ02539 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC3.44□□□□□ -1.86
HIST1H1AQ02539 RNU1-44P-201ENST00000384453 163 ntBASIC3.44□□□□□ -1.86
HIST1H1AQ02539 RNU6-146P-201ENST00000384602 108 ntBASIC3.44□□□□□ -1.86
HIST1H1AQ02539 AL078604.1-201ENST00000404609 466 ntBASIC3.44□□□□□ -1.86
HIST1H1AQ02539 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC3.44□□□□□ -1.86
HIST1H1AQ02539 SPTLC1P2-201ENST00000407089 121 ntBASIC3.44□□□□□ -1.86
HIST1H1AQ02539 JKAMPP1-201ENST00000413804 919 ntBASIC3.44□□□□□ -1.86
HIST1H1AQ02539 AC140479.3-201ENST00000418944 1126 ntBASIC3.44□□□□□ -1.86
HIST1H1AQ02539 AC062016.2-201ENST00000420950 676 ntBASIC3.44□□□□□ -1.86
HIST1H1AQ02539 MTND2P11-201ENST00000423638 648 ntBASIC3.44□□□□□ -1.86
HIST1H1AQ02539 RPS12P10-201ENST00000427031 377 ntBASIC3.44□□□□□ -1.86
HIST1H1AQ02539 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC3.44□□□□□ -1.86
HIST1H1AQ02539 AC097523.2-201ENST00000435551 652 ntBASIC3.44□□□□□ -1.86
HIST1H1AQ02539 AL627308.1-201ENST00000435693 821 ntBASIC3.44□□□□□ -1.86
HIST1H1AQ02539 BTG3P1-201ENST00000435859 716 ntBASIC3.44□□□□□ -1.86
HIST1H1AQ02539 HLA-N-201ENST00000437516 135 ntBASIC3.44□□□□□ -1.86
HIST1H1AQ02539 EXTL2P1-201ENST00000446218 416 ntBASIC3.44□□□□□ -1.86
HIST1H1AQ02539 RPS27AP15-201ENST00000447672 466 ntBASIC3.44□□□□□ -1.86
HIST1H1AQ02539 FABP3P2-201ENST00000453169 399 ntBASIC3.44□□□□□ -1.86
HIST1H1AQ02539 HIGD1AP8-201ENST00000453927 274 ntBASIC3.44□□□□□ -1.86
HIST1H1AQ02539 RPL21P71-201ENST00000465598 459 ntBASIC3.44□□□□□ -1.86
HIST1H1AQ02539 RPL7P16-201ENST00000479738 738 ntBASIC3.44□□□□□ -1.86
HIST1H1AQ02539 AC090013.1-201ENST00000485147 480 ntBASIC3.44□□□□□ -1.86
HIST1H1AQ02539 RPS4XP14-201ENST00000493072 781 ntBASIC3.44□□□□□ -1.86
HIST1H1AQ02539 SCARNA22-201ENST00000503991 125 ntBASIC3.44□□□□□ -1.86
HIST1H1AQ02539 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC3.44□□□□□ -1.86
HIST1H1AQ02539 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC3.44□□□□□ -1.86
HIST1H1AQ02539 PARP4P3-201ENST00000510265 317 ntBASIC3.44□□□□□ -1.86
HIST1H1AQ02539 SOX5P1-201ENST00000524155 1127 ntBASIC3.44□□□□□ -1.86
HIST1H1AQ02539 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC3.44□□□□□ -1.86
HIST1H1AQ02539 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC3.44□□□□□ -1.86
HIST1H1AQ02539 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC3.44□□□□□ -1.86
HIST1H1AQ02539 CYP4A43P-201ENST00000568156 121 ntBASIC3.44□□□□□ -1.86
HIST1H1AQ02539 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC3.44□□□□□ -1.86
HIST1H1AQ02539 AC020914.4-201ENST00000597690 277 ntBASIC3.44□□□□□ -1.86
HIST1H1AQ02539 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC3.44□□□□□ -1.86
HIST1H1AQ02539 AC023762.1-201ENST00000603280 584 ntBASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms