Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
VBP1P61758 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC3.97□□□□□ -1.77
VBP1P61758 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
VBP1P61758 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
VBP1P61758 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.97□□□□□ -1.77
VBP1P61758 AC017002.4-201ENST00000604721 1525 ntBASIC3.97□□□□□ -1.77
VBP1P61758 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
VBP1P61758 SNURFL-201ENST00000309296 343 ntBASIC3.97□□□□□ -1.77
VBP1P61758 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
VBP1P61758 AC023490.2-201ENST00000359859 470 ntBASIC3.97□□□□□ -1.77
VBP1P61758 RN7SKP269-201ENST00000365545 319 ntBASIC3.97□□□□□ -1.77
VBP1P61758 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.97□□□□□ -1.77
VBP1P61758 TRAPPC2P9-201ENST00000434556 343 ntBASIC3.97□□□□□ -1.77
VBP1P61758 DNAJA1P5-201ENST00000440278 943 ntBASIC3.97□□□□□ -1.77
VBP1P61758 MTND2P25-201ENST00000449028 610 ntBASIC3.97□□□□□ -1.77
VBP1P61758 YWHAEP1-201ENST00000453697 763 ntBASIC3.97□□□□□ -1.77
VBP1P61758 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC3.97□□□□□ -1.77
VBP1P61758 RPL9P32-201ENST00000464118 620 ntBASIC3.97□□□□□ -1.77
VBP1P61758 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC3.97□□□□□ -1.77
VBP1P61758 AP001086.1-201ENST00000494882 321 ntBASIC3.97□□□□□ -1.77
VBP1P61758 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
VBP1P61758 SNORD46.2-201ENST00000516021 102 ntBASIC3.97□□□□□ -1.77
VBP1P61758 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC3.97□□□□□ -1.77
VBP1P61758 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC3.97□□□□□ -1.77
VBP1P61758 NANOGNBP2-201ENST00000544753 553 ntBASIC3.97□□□□□ -1.77
VBP1P61758 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
VBP1P61758 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.97□□□□□ -1.77
VBP1P61758 AL161713.1-201ENST00000555538 145 ntBASIC3.97□□□□□ -1.77
VBP1P61758 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
VBP1P61758 AL360157.1-201ENST00000565962 87 ntBASIC3.97□□□□□ -1.77
VBP1P61758 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
VBP1P61758 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC3.97□□□□□ -1.77
VBP1P61758 MEMO1P5-201ENST00000604810 406 ntBASIC3.97□□□□□ -1.77
VBP1P61758 AC100767.2-201ENST00000604840 693 ntBASIC3.97□□□□□ -1.77
VBP1P61758 HMGB1P50-201ENST00000605814 607 ntBASIC3.97□□□□□ -1.77
VBP1P61758 FAM27B-201ENST00000610601 213 ntBASIC3.97□□□□□ -1.77
VBP1P61758 AL096712.1-201ENST00000614561 159 ntBASIC3.97□□□□□ -1.77
VBP1P61758 AC007204.2-201ENST00000615022 616 ntBASIC3.97□□□□□ -1.77
VBP1P61758 HTR1DP1-201ENST00000616500 888 ntBASIC3.97□□□□□ -1.77
VBP1P61758 MIR6813-201ENST00000621638 56 ntBASIC3.97□□□□□ -1.77
VBP1P61758 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC3.97□□□□□ -1.77
VBP1P61758 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.97□□□□□ -1.77
VBP1P61758 OR5AC4P-202ENST00000642086 985 ntBASIC3.97□□□□□ -1.77
VBP1P61758 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
VBP1P61758 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.97□□□□□ -1.77
VBP1P61758 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
VBP1P61758 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
VBP1P61758 SAMMSON-226ENST00000642089 1582 ntBASIC3.97□□□□□ -1.77
VBP1P61758 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
VBP1P61758 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
VBP1P61758 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC3.97□□□□□ -1.77
VBP1P61758 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.77
VBP1P61758 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC3.96□□□□□ -1.77
VBP1P61758 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC3.96□□□□□ -1.78
VBP1P61758 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
VBP1P61758 MIR92A2-201ENST00000385299 75 ntBASIC3.96□□□□□ -1.78
VBP1P61758 RPL31P52-201ENST00000407532 367 ntBASIC3.96□□□□□ -1.78
VBP1P61758 MIR1911-201ENST00000410783 80 ntBASIC3.96□□□□□ -1.78
VBP1P61758 SNORA74C-2-201ENST00000411179 201 ntBASIC3.96□□□□□ -1.78
VBP1P61758 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC3.96□□□□□ -1.78
VBP1P61758 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC3.96□□□□□ -1.78
VBP1P61758 RPS12P23-201ENST00000419579 400 ntBASIC3.96□□□□□ -1.78
VBP1P61758 AC093084.1-201ENST00000424233 687 ntBASIC3.96□□□□□ -1.78
VBP1P61758 HMGB3P5-201ENST00000428894 612 ntBASIC3.96□□□□□ -1.78
VBP1P61758 H2AFZP5-201ENST00000446960 382 ntBASIC3.96□□□□□ -1.78
VBP1P61758 VN1R32P-201ENST00000452234 905 ntBASIC3.96□□□□□ -1.78
VBP1P61758 AL606490.1-201ENST00000452266 765 ntBASIC3.96□□□□□ -1.78
VBP1P61758 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
VBP1P61758 PGAM1P13-201ENST00000507497 754 ntBASIC3.96□□□□□ -1.78
VBP1P61758 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC3.96□□□□□ -1.78
VBP1P61758 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC3.96□□□□□ -1.78
VBP1P61758 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC3.96□□□□□ -1.78
VBP1P61758 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC3.96□□□□□ -1.78
VBP1P61758 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC3.96□□□□□ -1.78
VBP1P61758 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC3.96□□□□□ -1.78
VBP1P61758 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC3.96□□□□□ -1.78
VBP1P61758 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC3.96□□□□□ -1.78
VBP1P61758 AC135626.1-201ENST00000556983 435 ntBASIC3.96□□□□□ -1.78
VBP1P61758 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC3.96□□□□□ -1.78
VBP1P61758 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC3.96□□□□□ -1.78
VBP1P61758 MIR4691-201ENST00000583764 85 ntBASIC3.96□□□□□ -1.78
VBP1P61758 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC3.96□□□□□ -1.78
VBP1P61758 EIF4A2P1-201ENST00000587313 1063 ntBASIC3.96□□□□□ -1.78
VBP1P61758 AC005034.4-201ENST00000603612 899 ntBASIC3.96□□□□□ -1.78
VBP1P61758 AC020910.3-201ENST00000603701 874 ntBASIC3.96□□□□□ -1.78
VBP1P61758 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC3.96□□□□□ -1.78
VBP1P61758 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.96□□□□□ -1.78
VBP1P61758 AL357153.4-201ENST00000620487 1016 ntBASIC3.96□□□□□ -1.78
VBP1P61758 AC019278.1-201ENST00000623516 479 ntBASIC3.96□□□□□ -1.78
VBP1P61758 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC3.96□□□□□ -1.78
VBP1P61758 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
VBP1P61758 MTND4P10-201ENST00000446199 1363 ntBASIC3.96□□□□□ -1.78
VBP1P61758 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.96□□□□□ -1.78
VBP1P61758 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.96□□□□□ -1.78
VBP1P61758 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC3.96□□□□□ -1.78
VBP1P61758 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.96□□□□□ -1.78
VBP1P61758 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
VBP1P61758 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC3.96□□□□□ -1.78
VBP1P61758 FAM35DP-201ENST00000323387 2712 ntBASIC3.95□□□□□ -1.78
VBP1P61758 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms