Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 RNU6-1257P-201ENST00000384625 110 ntBASIC4.72□□□□□ -1.65
CDH13P55290 AP000580.1-201ENST00000404439 358 ntBASIC4.72□□□□□ -1.65
CDH13P55290 AL590290.1-201ENST00000405336 380 ntBASIC4.72□□□□□ -1.65
CDH13P55290 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.72□□□□□ -1.65
CDH13P55290 RNU2-50P-201ENST00000410494 143 ntBASIC4.72□□□□□ -1.65
CDH13P55290 RNA5SP345-201ENST00000410646 108 ntBASIC4.72□□□□□ -1.65
CDH13P55290 GJA6P-201ENST00000415117 1042 ntBASIC4.72□□□□□ -1.65
CDH13P55290 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC4.72□□□□□ -1.65
CDH13P55290 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.72□□□□□ -1.65
CDH13P55290 AC079355.1-201ENST00000421770 223 ntBASIC4.72□□□□□ -1.65
CDH13P55290 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC4.72□□□□□ -1.65
CDH13P55290 AC005033.1-201ENST00000428904 813 ntBASIC4.72□□□□□ -1.65
CDH13P55290 FABP7P2-201ENST00000429946 379 ntBASIC4.72□□□□□ -1.65
CDH13P55290 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.72□□□□□ -1.65
CDH13P55290 NMNAT1P2-201ENST00000435192 860 ntBASIC4.72□□□□□ -1.65
CDH13P55290 AC092447.2-201ENST00000435487 669 ntBASIC4.72□□□□□ -1.65
CDH13P55290 AC092013.1-201ENST00000438795 332 ntBASIC4.72□□□□□ -1.65
CDH13P55290 CBX1P4-201ENST00000439415 457 ntBASIC4.72□□□□□ -1.65
CDH13P55290 RN7SL558P-201ENST00000497468 299 ntBASIC4.72□□□□□ -1.65
CDH13P55290 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CDH13P55290 ARL4AP1-201ENST00000503220 705 ntBASIC4.72□□□□□ -1.65
CDH13P55290 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
CDH13P55290 RNU6-347P-201ENST00000516658 105 ntBASIC4.72□□□□□ -1.65
CDH13P55290 IGHVIII-38-1-201ENST00000521454 282 ntBASIC4.72□□□□□ -1.65
CDH13P55290 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC4.72□□□□□ -1.65
CDH13P55290 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.72□□□□□ -1.65
CDH13P55290 AC092490.3-201ENST00000545370 572 ntBASIC4.72□□□□□ -1.65
CDH13P55290 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC4.72□□□□□ -1.65
CDH13P55290 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC4.72□□□□□ -1.65
CDH13P55290 AC093249.4-201ENST00000564755 259 ntBASIC4.72□□□□□ -1.65
CDH13P55290 MIR4489-201ENST00000578869 62 ntBASIC4.72□□□□□ -1.65
CDH13P55290 AC012254.4-201ENST00000588843 273 ntBASIC4.72□□□□□ -1.65
CDH13P55290 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC4.72□□□□□ -1.65
CDH13P55290 BNIP3P27-201ENST00000599991 412 ntBASIC4.72□□□□□ -1.65
CDH13P55290 AC124856.1-201ENST00000600819 896 ntBASIC4.72□□□□□ -1.65
CDH13P55290 AC123786.2-201ENST00000603459 275 ntBASIC4.72□□□□□ -1.65
CDH13P55290 AC010200.2-201ENST00000605098 235 ntBASIC4.72□□□□□ -1.65
CDH13P55290 IMMP1LP1-201ENST00000605170 488 ntBASIC4.72□□□□□ -1.65
CDH13P55290 AC010424.2-201ENST00000607594 443 ntBASIC4.72□□□□□ -1.65
CDH13P55290 AC093799.2-201ENST00000610062 578 ntBASIC4.72□□□□□ -1.65
CDH13P55290 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC4.72□□□□□ -1.65
CDH13P55290 AC078880.5-201ENST00000617845 421 ntBASIC4.72□□□□□ -1.65
CDH13P55290 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC4.72□□□□□ -1.65
CDH13P55290 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
CDH13P55290 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
CDH13P55290 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.72□□□□□ -1.65
CDH13P55290 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.72□□□□□ -1.65
CDH13P55290 AP001273.1-201ENST00000624493 3152 ntBASIC4.71□□□□□ -1.65
CDH13P55290 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.71□□□□□ -1.65
CDH13P55290 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.65
CDH13P55290 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
CDH13P55290 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CDH13P55290 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CDH13P55290 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.71□□□□□ -1.66
CDH13P55290 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.71□□□□□ -1.66
CDH13P55290 RNU1-83P-201ENST00000363426 164 ntBASIC4.71□□□□□ -1.66
CDH13P55290 RN7SKP269-201ENST00000365545 319 ntBASIC4.71□□□□□ -1.66
CDH13P55290 RNU6-468P-201ENST00000384003 109 ntBASIC4.71□□□□□ -1.66
CDH13P55290 RPL23AP59-201ENST00000399415 461 ntBASIC4.71□□□□□ -1.66
CDH13P55290 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.71□□□□□ -1.66
CDH13P55290 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC4.71□□□□□ -1.66
CDH13P55290 AP000534.2-201ENST00000412729 568 ntBASIC4.71□□□□□ -1.66
CDH13P55290 RPL6P29-201ENST00000414863 865 ntBASIC4.71□□□□□ -1.66
CDH13P55290 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC4.71□□□□□ -1.66
CDH13P55290 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC4.71□□□□□ -1.66
CDH13P55290 TDGF1P1-201ENST00000445734 527 ntBASIC4.71□□□□□ -1.66
CDH13P55290 AL591363.1-201ENST00000450091 483 ntBASIC4.71□□□□□ -1.66
CDH13P55290 OTX2P1-201ENST00000450956 354 ntBASIC4.71□□□□□ -1.66
CDH13P55290 RPL23AP56-201ENST00000460778 453 ntBASIC4.71□□□□□ -1.66
CDH13P55290 AC108751.2-201ENST00000469993 231 ntBASIC4.71□□□□□ -1.66
CDH13P55290 RPS17P11-201ENST00000474297 293 ntBASIC4.71□□□□□ -1.66
CDH13P55290 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC4.71□□□□□ -1.66
CDH13P55290 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.71□□□□□ -1.66
CDH13P55290 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC4.71□□□□□ -1.66
CDH13P55290 AC004980.4-201ENST00000513375 203 ntBASIC4.71□□□□□ -1.66
CDH13P55290 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
CDH13P55290 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC4.71□□□□□ -1.66
CDH13P55290 AC019227.1-201ENST00000526902 510 ntBASIC4.71□□□□□ -1.66
CDH13P55290 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC4.71□□□□□ -1.66
CDH13P55290 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
CDH13P55290 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.71□□□□□ -1.66
CDH13P55290 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.71□□□□□ -1.66
CDH13P55290 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC4.71□□□□□ -1.66
CDH13P55290 PSMA6P4-201ENST00000603247 718 ntBASIC4.71□□□□□ -1.66
CDH13P55290 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.71□□□□□ -1.66
CDH13P55290 LGI1-209ENST00000627699 664 ntTSL 3 BASIC4.71□□□□□ -1.66
CDH13P55290 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
CDH13P55290 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC4.71□□□□□ -1.66
CDH13P55290 LINC01739-205ENST00000641890 573 ntBASIC4.71□□□□□ -1.66
CDH13P55290 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
CDH13P55290 AP000756.2-201ENST00000624168 2567 ntBASIC4.71□□□□□ -1.66
CDH13P55290 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
CDH13P55290 AL137100.1-201ENST00000556703 1620 ntBASIC4.71□□□□□ -1.66
CDH13P55290 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CDH13P55290 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
CDH13P55290 AL132640.2-201ENST00000559968 1698 ntBASIC4.7□□□□□ -1.66
CDH13P55290 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
CDH13P55290 AL359922.3-201ENST00000624779 1670 ntBASIC4.7□□□□□ -1.66
CDH13P55290 AL445487.1-201ENST00000415694 1580 ntBASIC4.7□□□□□ -1.66
CDH13P55290 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms