Protein–RNA interactions for Protein: P53396

ACLY, ATP-citrate synthase, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACLYP53396 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
ACLYP53396 RNU6-1331P-201ENST00000363658 106 ntBASIC4.91□□□□□ -1.62
ACLYP53396 SNORA62.3-201ENST00000365110 153 ntBASIC4.91□□□□□ -1.62
ACLYP53396 MIR554-201ENST00000384874 96 ntBASIC4.91□□□□□ -1.62
ACLYP53396 MIR670-201ENST00000390142 98 ntBASIC4.91□□□□□ -1.62
ACLYP53396 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC4.91□□□□□ -1.62
ACLYP53396 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
ACLYP53396 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.91□□□□□ -1.62
ACLYP53396 AC006946.1-201ENST00000429106 328 ntBASIC4.91□□□□□ -1.62
ACLYP53396 BTF3P10-201ENST00000433415 495 ntBASIC4.91□□□□□ -1.62
ACLYP53396 snoU13.22-201ENST00000459428 104 ntBASIC4.91□□□□□ -1.62
ACLYP53396 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
ACLYP53396 AC090686.1-201ENST00000481577 749 ntBASIC4.91□□□□□ -1.62
ACLYP53396 RNA5SP49-201ENST00000516450 115 ntBASIC4.91□□□□□ -1.62
ACLYP53396 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.91□□□□□ -1.62
ACLYP53396 AL121839.1-201ENST00000556233 1185 ntBASIC4.91□□□□□ -1.62
ACLYP53396 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC4.91□□□□□ -1.62
ACLYP53396 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC4.91□□□□□ -1.62
ACLYP53396 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC4.91□□□□□ -1.62
ACLYP53396 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
ACLYP53396 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.91□□□□□ -1.62
ACLYP53396 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
ACLYP53396 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC4.91□□□□□ -1.62
ACLYP53396 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.91□□□□□ -1.62
ACLYP53396 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
ACLYP53396 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
ACLYP53396 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
ACLYP53396 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
ACLYP53396 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.91□□□□□ -1.62
ACLYP53396 AP000542.2-201ENST00000623199 6179 ntBASIC4.91□□□□□ -1.62
ACLYP53396 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
ACLYP53396 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.62
ACLYP53396 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.9□□□□□ -1.62
ACLYP53396 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.9□□□□□ -1.62
ACLYP53396 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
ACLYP53396 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
ACLYP53396 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
ACLYP53396 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC4.9□□□□□ -1.63
ACLYP53396 AL080315.1-201ENST00000406055 466 ntBASIC4.9□□□□□ -1.63
ACLYP53396 AC009237.10-201ENST00000414112 510 ntBASIC4.9□□□□□ -1.63
ACLYP53396 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
ACLYP53396 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC4.9□□□□□ -1.63
ACLYP53396 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC4.9□□□□□ -1.63
ACLYP53396 RPL21P89-201ENST00000444021 467 ntBASIC4.9□□□□□ -1.63
ACLYP53396 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC4.9□□□□□ -1.63
ACLYP53396 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC4.9□□□□□ -1.63
ACLYP53396 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.9□□□□□ -1.63
ACLYP53396 AP001960.1-201ENST00000506494 658 ntBASIC4.9□□□□□ -1.63
ACLYP53396 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC4.9□□□□□ -1.63
ACLYP53396 RNU1-45P-201ENST00000517191 141 ntBASIC4.9□□□□□ -1.63
ACLYP53396 MEG8-217ENST00000556637 924 ntTSL 5 BASIC4.9□□□□□ -1.63
ACLYP53396 MIR4286-201ENST00000580651 93 ntBASIC4.9□□□□□ -1.63
ACLYP53396 AC006116.5-201ENST00000591936 559 ntBASIC4.9□□□□□ -1.63
ACLYP53396 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC4.9□□□□□ -1.63
ACLYP53396 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.9□□□□□ -1.63
ACLYP53396 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC4.9□□□□□ -1.63
ACLYP53396 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
ACLYP53396 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.9□□□□□ -1.63
ACLYP53396 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.9□□□□□ -1.63
ACLYP53396 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
ACLYP53396 AC027228.2-201ENST00000567141 2154 ntBASIC4.89□□□□□ -1.63
ACLYP53396 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
ACLYP53396 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
ACLYP53396 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
ACLYP53396 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.89□□□□□ -1.63
ACLYP53396 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.89□□□□□ -1.63
ACLYP53396 AL355852.1-201ENST00000454081 1771 ntBASIC4.89□□□□□ -1.63
ACLYP53396 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.89□□□□□ -1.63
ACLYP53396 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
ACLYP53396 AC104260.2-201ENST00000623551 3497 ntBASIC4.89□□□□□ -1.63
ACLYP53396 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
ACLYP53396 RNA5SP513-201ENST00000364648 118 ntBASIC4.89□□□□□ -1.63
ACLYP53396 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.89□□□□□ -1.63
ACLYP53396 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.89□□□□□ -1.63
ACLYP53396 ARAFP1-201ENST00000422172 605 ntBASIC4.89□□□□□ -1.63
ACLYP53396 AC104333.2-201ENST00000422630 192 ntBASIC4.89□□□□□ -1.63
ACLYP53396 HSPE1P16-201ENST00000426640 348 ntBASIC4.89□□□□□ -1.63
ACLYP53396 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC4.89□□□□□ -1.63
ACLYP53396 RPL5P32-201ENST00000454085 879 ntBASIC4.89□□□□□ -1.63
ACLYP53396 EIF4A2P2-201ENST00000455776 1070 ntBASIC4.89□□□□□ -1.63
ACLYP53396 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
ACLYP53396 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC4.89□□□□□ -1.63
ACLYP53396 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC4.89□□□□□ -1.63
ACLYP53396 RNA5SP497-201ENST00000516081 97 ntBASIC4.89□□□□□ -1.63
ACLYP53396 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
ACLYP53396 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.89□□□□□ -1.63
ACLYP53396 AL358913.1-201ENST00000554342 121 ntBASIC4.89□□□□□ -1.63
ACLYP53396 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
ACLYP53396 AL161729.3-201ENST00000603533 673 ntBASIC4.89□□□□□ -1.63
ACLYP53396 AL158062.1-201ENST00000619632 745 ntBASIC4.89□□□□□ -1.63
ACLYP53396 AC074140.1-201ENST00000621617 208 ntBASIC4.89□□□□□ -1.63
ACLYP53396 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC4.89□□□□□ -1.63
ACLYP53396 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.89□□□□□ -1.63
ACLYP53396 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
ACLYP53396 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.89□□□□□ -1.63
ACLYP53396 USP45-204ENST00000369233 2514 ntTSL 5 BASIC4.89□□□□□ -1.63
ACLYP53396 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.89□□□□□ -1.63
ACLYP53396 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC4.89□□□□□ -1.63
ACLYP53396 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.89□□□□□ -1.63
ACLYP53396 AL359922.3-201ENST00000624779 1670 ntBASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms