Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
LHX1P48742 OR6C64P-201ENST00000419708 825 ntBASIC4.9□□□□□ -1.63
LHX1P48742 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC4.9□□□□□ -1.63
LHX1P48742 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC4.9□□□□□ -1.63
LHX1P48742 RPS27AP7-201ENST00000422792 455 ntBASIC4.9□□□□□ -1.63
LHX1P48742 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.9□□□□□ -1.63
LHX1P48742 OR2AH1P-201ENST00000425717 928 ntBASIC4.9□□□□□ -1.63
LHX1P48742 EIF2S2P3-201ENST00000428356 999 ntBASIC4.9□□□□□ -1.63
LHX1P48742 RPL12P28-201ENST00000430852 489 ntBASIC4.9□□□□□ -1.63
LHX1P48742 CACYBPP1-201ENST00000438592 684 ntBASIC4.9□□□□□ -1.63
LHX1P48742 ELOCP3-201ENST00000439303 348 ntBASIC4.9□□□□□ -1.63
LHX1P48742 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC4.9□□□□□ -1.63
LHX1P48742 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.9□□□□□ -1.63
LHX1P48742 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC4.9□□□□□ -1.63
LHX1P48742 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC4.9□□□□□ -1.63
LHX1P48742 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC4.9□□□□□ -1.63
LHX1P48742 AC108120.2-201ENST00000512973 294 ntBASIC4.9□□□□□ -1.63
LHX1P48742 RNU6-1308P-201ENST00000516817 103 ntBASIC4.9□□□□□ -1.63
LHX1P48742 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC4.9□□□□□ -1.63
LHX1P48742 IGLVIV-66-1-201ENST00000521832 460 ntBASIC4.9□□□□□ -1.63
LHX1P48742 AC018442.3-201ENST00000523025 183 ntBASIC4.9□□□□□ -1.63
LHX1P48742 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC4.9□□□□□ -1.63
LHX1P48742 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC4.9□□□□□ -1.63
LHX1P48742 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.9□□□□□ -1.63
LHX1P48742 AC084783.1-201ENST00000565846 910 ntBASIC4.9□□□□□ -1.63
LHX1P48742 MIR4675-201ENST00000577898 77 ntBASIC4.9□□□□□ -1.63
LHX1P48742 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC4.9□□□□□ -1.63
LHX1P48742 AC209154.1-201ENST00000582156 337 ntBASIC4.9□□□□□ -1.63
LHX1P48742 MIR5096-201ENST00000583713 70 ntBASIC4.9□□□□□ -1.63
LHX1P48742 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC4.9□□□□□ -1.63
LHX1P48742 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC4.9□□□□□ -1.63
LHX1P48742 ZNF92P2-201ENST00000600543 1059 ntBASIC4.9□□□□□ -1.63
LHX1P48742 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC4.9□□□□□ -1.63
LHX1P48742 AP005019.3-201ENST00000620418 560 ntBASIC4.9□□□□□ -1.63
LHX1P48742 AL359757.1-201ENST00000623176 255 ntBASIC4.9□□□□□ -1.63
LHX1P48742 AC080188.3-201ENST00000624842 748 ntBASIC4.9□□□□□ -1.63
LHX1P48742 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
LHX1P48742 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
LHX1P48742 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
LHX1P48742 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.9□□□□□ -1.63
LHX1P48742 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
LHX1P48742 AL391684.1-202ENST00000641293 1636 ntBASIC4.9□□□□□ -1.63
LHX1P48742 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.9□□□□□ -1.63
LHX1P48742 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
LHX1P48742 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
LHX1P48742 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
LHX1P48742 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.89□□□□□ -1.63
LHX1P48742 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
LHX1P48742 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
LHX1P48742 OR56B2P-201ENST00000317102 954 ntBASIC4.89□□□□□ -1.63
LHX1P48742 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.89□□□□□ -1.63
LHX1P48742 AC002524.1-201ENST00000411687 547 ntBASIC4.89□□□□□ -1.63
LHX1P48742 AC009480.2-201ENST00000422916 432 ntBASIC4.89□□□□□ -1.63
LHX1P48742 AC012512.1-201ENST00000446594 718 ntBASIC4.89□□□□□ -1.63
LHX1P48742 AL133244.1-201ENST00000456007 258 ntBASIC4.89□□□□□ -1.63
LHX1P48742 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC4.89□□□□□ -1.63
LHX1P48742 RNU6-1102P-201ENST00000516149 96 ntBASIC4.89□□□□□ -1.63
LHX1P48742 HIGD1AP18-201ENST00000520730 278 ntBASIC4.89□□□□□ -1.63
LHX1P48742 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.89□□□□□ -1.63
LHX1P48742 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.89□□□□□ -1.63
LHX1P48742 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.89□□□□□ -1.63
LHX1P48742 AP000859.1-201ENST00000525536 307 ntBASIC4.89□□□□□ -1.63
LHX1P48742 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC4.89□□□□□ -1.63
LHX1P48742 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC4.89□□□□□ -1.63
LHX1P48742 AP000827.1-201ENST00000527814 258 ntBASIC4.89□□□□□ -1.63
LHX1P48742 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.89□□□□□ -1.63
LHX1P48742 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
LHX1P48742 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
LHX1P48742 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC4.89□□□□□ -1.63
LHX1P48742 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.89□□□□□ -1.63
LHX1P48742 SETP1-201ENST00000556014 845 ntBASIC4.89□□□□□ -1.63
LHX1P48742 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC4.89□□□□□ -1.63
LHX1P48742 CBX3P2-202ENST00000583365 535 ntBASIC4.89□□□□□ -1.63
LHX1P48742 MIR4715-201ENST00000584117 79 ntBASIC4.89□□□□□ -1.63
LHX1P48742 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC4.89□□□□□ -1.63
LHX1P48742 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC4.89□□□□□ -1.63
LHX1P48742 AC068790.4-201ENST00000602474 263 ntBASIC4.89□□□□□ -1.63
LHX1P48742 AC090617.9-201ENST00000623751 147 ntBASIC4.89□□□□□ -1.63
LHX1P48742 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
LHX1P48742 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
LHX1P48742 AL672167.1-204ENST00000641875 3017 ntBASIC4.89□□□□□ -1.63
LHX1P48742 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
LHX1P48742 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
LHX1P48742 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.89□□□□□ -1.63
LHX1P48742 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.89□□□□□ -1.63
LHX1P48742 AL606537.1-201ENST00000607258 2011 ntBASIC4.89□□□□□ -1.63
LHX1P48742 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.89□□□□□ -1.63
LHX1P48742 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
LHX1P48742 MFSD8-242ENST00000641690 4199 ntBASIC4.88□□□□□ -1.63
LHX1P48742 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
LHX1P48742 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
LHX1P48742 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
LHX1P48742 AC120338.1-201ENST00000625074 1541 ntBASIC4.88□□□□□ -1.63
LHX1P48742 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
LHX1P48742 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.88□□□□□ -1.63
LHX1P48742 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.88□□□□□ -1.63
LHX1P48742 RNU6-650P-201ENST00000365658 111 ntBASIC4.88□□□□□ -1.63
LHX1P48742 TAF9BP2-201ENST00000400856 499 ntBASIC4.88□□□□□ -1.63
LHX1P48742 AL592291.1-201ENST00000403830 352 ntBASIC4.88□□□□□ -1.63
LHX1P48742 RNA5SP296-201ENST00000410523 111 ntBASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms