Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
PTPN9P43378 AC008758.3-201ENST00000507003 1829 ntBASIC5.13□□□□□ -1.59
PTPN9P43378 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
PTPN9P43378 AC009643.2-201ENST00000603543 1448 ntBASIC5.13□□□□□ -1.59
PTPN9P43378 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC5.13□□□□□ -1.59
PTPN9P43378 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
PTPN9P43378 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
PTPN9P43378 AC083843.3-201ENST00000623679 2186 ntBASIC5.12□□□□□ -1.59
PTPN9P43378 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
PTPN9P43378 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.12□□□□□ -1.59
PTPN9P43378 CASC19-284ENST00000642142 1868 ntBASIC5.12□□□□□ -1.59
PTPN9P43378 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC5.12□□□□□ -1.59
PTPN9P43378 RNU6-236P-201ENST00000363886 106 ntBASIC5.12□□□□□ -1.59
PTPN9P43378 RNU6-452P-201ENST00000384406 107 ntBASIC5.12□□□□□ -1.59
PTPN9P43378 SNORA70-201ENST00000384436 135 ntBASIC5.12□□□□□ -1.59
PTPN9P43378 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
PTPN9P43378 RNU6-244P-201ENST00000391028 104 ntBASIC5.12□□□□□ -1.59
PTPN9P43378 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
PTPN9P43378 RPL23AP59-201ENST00000399415 461 ntBASIC5.12□□□□□ -1.59
PTPN9P43378 AL357515.1-201ENST00000402967 542 ntBASIC5.12□□□□□ -1.59
PTPN9P43378 RPS3AP25-201ENST00000411660 793 ntBASIC5.12□□□□□ -1.59
PTPN9P43378 NPM1P40-201ENST00000412758 733 ntBASIC5.12□□□□□ -1.59
PTPN9P43378 AC105402.1-201ENST00000413336 545 ntBASIC5.12□□□□□ -1.59
PTPN9P43378 GTF2IP5-201ENST00000414608 731 ntBASIC5.12□□□□□ -1.59
PTPN9P43378 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC5.12□□□□□ -1.59
PTPN9P43378 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
PTPN9P43378 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC5.12□□□□□ -1.59
PTPN9P43378 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC5.12□□□□□ -1.59
PTPN9P43378 SEPT14P24-201ENST00000447236 180 ntBASIC5.12□□□□□ -1.59
PTPN9P43378 TRY2P-201ENST00000448860 689 ntBASIC5.12□□□□□ -1.59
PTPN9P43378 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
PTPN9P43378 AC098826.2-201ENST00000452011 651 ntBASIC5.12□□□□□ -1.59
PTPN9P43378 AC110749.1-201ENST00000462007 357 ntBASIC5.12□□□□□ -1.59
PTPN9P43378 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
PTPN9P43378 AC008638.1-201ENST00000506035 866 ntBASIC5.12□□□□□ -1.59
PTPN9P43378 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC5.12□□□□□ -1.59
PTPN9P43378 ATG10-208ENST00000513634 618 ntTSL 2 BASIC5.12□□□□□ -1.59
PTPN9P43378 RNU6-276P-201ENST00000516114 96 ntBASIC5.12□□□□□ -1.59
PTPN9P43378 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC5.12□□□□□ -1.59
PTPN9P43378 AP000859.1-201ENST00000525536 307 ntBASIC5.12□□□□□ -1.59
PTPN9P43378 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC5.12□□□□□ -1.59
PTPN9P43378 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC5.12□□□□□ -1.59
PTPN9P43378 CYB5AP5-201ENST00000549779 389 ntBASIC5.12□□□□□ -1.59
PTPN9P43378 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC5.12□□□□□ -1.59
PTPN9P43378 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC5.12□□□□□ -1.59
PTPN9P43378 AL390726.5-202ENST00000564800 256 ntBASIC5.12□□□□□ -1.59
PTPN9P43378 AC233702.9-201ENST00000581528 203 ntBASIC5.12□□□□□ -1.59
PTPN9P43378 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC5.12□□□□□ -1.59
PTPN9P43378 AC010424.2-201ENST00000607594 443 ntBASIC5.12□□□□□ -1.59
PTPN9P43378 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC5.12□□□□□ -1.59
PTPN9P43378 AC068870.2-201ENST00000620635 389 ntBASIC5.12□□□□□ -1.59
PTPN9P43378 AC091905.4-201ENST00000623432 202 ntBASIC5.12□□□□□ -1.59
PTPN9P43378 AC145207.9-201ENST00000623802 325 ntBASIC5.12□□□□□ -1.59
PTPN9P43378 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
PTPN9P43378 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.12□□□□□ -1.59
PTPN9P43378 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
PTPN9P43378 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC5.12□□□□□ -1.59
PTPN9P43378 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC5.12□□□□□ -1.59
PTPN9P43378 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.12□□□□□ -1.59
PTPN9P43378 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
PTPN9P43378 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
PTPN9P43378 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.11□□□□□ -1.59
PTPN9P43378 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
PTPN9P43378 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
PTPN9P43378 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
PTPN9P43378 RN7SKP104-201ENST00000362605 328 ntBASIC5.11□□□□□ -1.59
PTPN9P43378 RNU5B-1-201ENST00000363286 116 ntBASIC5.11□□□□□ -1.59
PTPN9P43378 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC5.11□□□□□ -1.59
PTPN9P43378 MIR142-201ENST00000384835 87 ntBASIC5.11□□□□□ -1.59
PTPN9P43378 MIR320B1-201ENST00000390209 79 ntBASIC5.11□□□□□ -1.59
PTPN9P43378 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
PTPN9P43378 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
PTPN9P43378 AC233289.1-201ENST00000403700 508 ntBASIC5.11□□□□□ -1.59
PTPN9P43378 TBCAP2-201ENST00000416175 326 ntBASIC5.11□□□□□ -1.59
PTPN9P43378 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC5.11□□□□□ -1.59
PTPN9P43378 USP9YP21-201ENST00000420603 432 ntBASIC5.11□□□□□ -1.59
PTPN9P43378 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC5.11□□□□□ -1.59
PTPN9P43378 RBMY2QP-201ENST00000429799 1147 ntBASIC5.11□□□□□ -1.59
PTPN9P43378 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC5.11□□□□□ -1.59
PTPN9P43378 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC5.11□□□□□ -1.59
PTPN9P43378 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC5.11□□□□□ -1.59
PTPN9P43378 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC5.11□□□□□ -1.59
PTPN9P43378 MTCO1P53-201ENST00000441633 699 ntBASIC5.11□□□□□ -1.59
PTPN9P43378 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC5.11□□□□□ -1.59
PTPN9P43378 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC5.11□□□□□ -1.59
PTPN9P43378 RPL23AP56-201ENST00000460778 453 ntBASIC5.11□□□□□ -1.59
PTPN9P43378 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
PTPN9P43378 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC5.11□□□□□ -1.59
PTPN9P43378 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
PTPN9P43378 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC5.11□□□□□ -1.59
PTPN9P43378 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC5.11□□□□□ -1.59
PTPN9P43378 AC008083.2-201ENST00000546707 476 ntBASIC5.11□□□□□ -1.59
PTPN9P43378 MIR3936-201ENST00000584304 110 ntBASIC5.11□□□□□ -1.59
PTPN9P43378 RN7SL622P-201ENST00000585292 275 ntBASIC5.11□□□□□ -1.59
PTPN9P43378 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC5.11□□□□□ -1.59
PTPN9P43378 AL445222.1-201ENST00000607259 628 ntBASIC5.11□□□□□ -1.59
PTPN9P43378 AC037198.3-201ENST00000616754 526 ntBASIC5.11□□□□□ -1.59
PTPN9P43378 AC074140.1-201ENST00000621617 208 ntBASIC5.11□□□□□ -1.59
PTPN9P43378 AC011815.3-201ENST00000624194 473 ntBASIC5.11□□□□□ -1.59
PTPN9P43378 AL109659.3-201ENST00000624985 950 ntBASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms