Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 RNU5A-7P-201ENST00000515979 116 ntBASIC5.07□□□□□ -1.6
HADHAP40939 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC5.07□□□□□ -1.6
HADHAP40939 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC5.07□□□□□ -1.6
HADHAP40939 AC068339.2-201ENST00000534395 618 ntBASIC5.07□□□□□ -1.6
HADHAP40939 AC068446.3-201ENST00000555285 382 ntBASIC5.07□□□□□ -1.6
HADHAP40939 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC5.07□□□□□ -1.6
HADHAP40939 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC5.07□□□□□ -1.6
HADHAP40939 AC090312.1-201ENST00000580637 348 ntBASIC5.07□□□□□ -1.6
HADHAP40939 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC5.07□□□□□ -1.6
HADHAP40939 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC5.07□□□□□ -1.6
HADHAP40939 AC006946.3-201ENST00000609791 756 ntBASIC5.07□□□□□ -1.6
HADHAP40939 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
HADHAP40939 AL138955.1-201ENST00000622881 1040 ntBASIC5.07□□□□□ -1.6
HADHAP40939 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.07□□□□□ -1.6
HADHAP40939 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
HADHAP40939 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
HADHAP40939 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC5.07□□□□□ -1.6
HADHAP40939 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
HADHAP40939 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC5.07□□□□□ -1.6
HADHAP40939 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
HADHAP40939 HSPA8P18-201ENST00000439846 1928 ntBASIC5.07□□□□□ -1.6
HADHAP40939 THAP12P4-201ENST00000528321 2266 ntBASIC5.07□□□□□ -1.6
HADHAP40939 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.07□□□□□ -1.6
HADHAP40939 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
HADHAP40939 RNF6P1-201ENST00000444889 1784 ntBASIC5.06□□□□□ -1.6
HADHAP40939 AP001642.1-201ENST00000624727 2117 ntBASIC5.06□□□□□ -1.6
HADHAP40939 MAPK10-320ENST00000641462 6696 ntBASIC5.06□□□□□ -1.6
HADHAP40939 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.06□□□□□ -1.6
HADHAP40939 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC5.06□□□□□ -1.6
HADHAP40939 ZNF652P1-201ENST00000442420 1309 ntBASIC5.06□□□□□ -1.6
HADHAP40939 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
HADHAP40939 MIR92A2-201ENST00000385299 75 ntBASIC5.06□□□□□ -1.6
HADHAP40939 AC013442.1-201ENST00000397347 228 ntBASIC5.06□□□□□ -1.6
HADHAP40939 HMGB3P19-201ENST00000403971 560 ntBASIC5.06□□□□□ -1.6
HADHAP40939 ATF1P1-201ENST00000406040 927 ntBASIC5.06□□□□□ -1.6
HADHAP40939 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC5.06□□□□□ -1.6
HADHAP40939 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.06□□□□□ -1.6
HADHAP40939 NPM1P33-201ENST00000438918 872 ntBASIC5.06□□□□□ -1.6
HADHAP40939 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5.06□□□□□ -1.6
HADHAP40939 AL096829.2-201ENST00000446582 742 ntBASIC5.06□□□□□ -1.6
HADHAP40939 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.06□□□□□ -1.6
HADHAP40939 AC092647.2-201ENST00000452998 253 ntBASIC5.06□□□□□ -1.6
HADHAP40939 AL645937.3-201ENST00000453647 936 ntBASIC5.06□□□□□ -1.6
HADHAP40939 AL035407.2-201ENST00000454090 378 ntBASIC5.06□□□□□ -1.6
HADHAP40939 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC5.06□□□□□ -1.6
HADHAP40939 RPS17P11-201ENST00000474297 293 ntBASIC5.06□□□□□ -1.6
HADHAP40939 RPS18P6-201ENST00000476880 458 ntBASIC5.06□□□□□ -1.6
HADHAP40939 AL161747.1-201ENST00000480068 358 ntBASIC5.06□□□□□ -1.6
HADHAP40939 RN7SL97P-201ENST00000486780 299 ntBASIC5.06□□□□□ -1.6
HADHAP40939 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
HADHAP40939 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC5.06□□□□□ -1.6
HADHAP40939 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC5.06□□□□□ -1.6
HADHAP40939 PGBD4P4-201ENST00000509673 613 ntBASIC5.06□□□□□ -1.6
HADHAP40939 ENPP7P9-201ENST00000514456 627 ntBASIC5.06□□□□□ -1.6
HADHAP40939 AC138938.1-201ENST00000515431 782 ntBASIC5.06□□□□□ -1.6
HADHAP40939 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.06□□□□□ -1.6
HADHAP40939 RNA5SP249-201ENST00000516127 99 ntBASIC5.06□□□□□ -1.6
HADHAP40939 RNA5SP303-201ENST00000516192 130 ntBASIC5.06□□□□□ -1.6
HADHAP40939 AP003102.1-201ENST00000525638 661 ntBASIC5.06□□□□□ -1.6
HADHAP40939 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC5.06□□□□□ -1.6
HADHAP40939 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC5.06□□□□□ -1.6
HADHAP40939 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC5.06□□□□□ -1.6
HADHAP40939 AC092490.3-201ENST00000545370 572 ntBASIC5.06□□□□□ -1.6
HADHAP40939 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC5.06□□□□□ -1.6
HADHAP40939 NMNAT1P1-201ENST00000554095 876 ntBASIC5.06□□□□□ -1.6
HADHAP40939 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
HADHAP40939 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC5.06□□□□□ -1.6
HADHAP40939 AC104072.1-201ENST00000568817 668 ntBASIC5.06□□□□□ -1.6
HADHAP40939 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC5.06□□□□□ -1.6
HADHAP40939 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.06□□□□□ -1.6
HADHAP40939 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC5.06□□□□□ -1.6
HADHAP40939 AC125494.3-201ENST00000602759 455 ntBASIC5.06□□□□□ -1.6
HADHAP40939 AC018645.2-201ENST00000609151 472 ntBASIC5.06□□□□□ -1.6
HADHAP40939 TEX41-254ENST00000626394 423 ntTSL 5 BASIC5.06□□□□□ -1.6
HADHAP40939 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC5.06□□□□□ -1.6
HADHAP40939 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC5.06□□□□□ -1.6
HADHAP40939 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC5.06□□□□□ -1.6
HADHAP40939 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
HADHAP40939 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
HADHAP40939 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
HADHAP40939 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
HADHAP40939 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
HADHAP40939 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
HADHAP40939 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
HADHAP40939 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
HADHAP40939 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC5.06□□□□□ -1.6
HADHAP40939 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
HADHAP40939 CYP1D1P-201ENST00000416662 1433 ntBASIC5.06□□□□□ -1.6
HADHAP40939 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC5.06□□□□□ -1.6
HADHAP40939 AL132640.2-201ENST00000559968 1698 ntBASIC5.05□□□□□ -1.6
HADHAP40939 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
HADHAP40939 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.05□□□□□ -1.6
HADHAP40939 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
HADHAP40939 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
HADHAP40939 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
HADHAP40939 Z95327.2-201ENST00000414579 1873 ntBASIC5.05□□□□□ -1.6
HADHAP40939 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
HADHAP40939 RPL23P2-201ENST00000320371 421 ntBASIC5.05□□□□□ -1.6
HADHAP40939 RNA5SP27-201ENST00000363839 119 ntBASIC5.05□□□□□ -1.6
HADHAP40939 RNU6-354P-201ENST00000383862 107 ntBASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms