Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 IGKV2D-19-201ENST00000523346 262 ntBASIC4.98□□□□□ -1.61
COL4A5P29400 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
COL4A5P29400 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
COL4A5P29400 AC019176.2-201ENST00000611579 315 ntBASIC4.98□□□□□ -1.61
COL4A5P29400 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
COL4A5P29400 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
COL4A5P29400 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.98□□□□□ -1.61
COL4A5P29400 U6.105-201ENST00000637379 88 ntBASIC4.98□□□□□ -1.61
COL4A5P29400 AL672167.1-203ENST00000641299 2975 ntBASIC4.98□□□□□ -1.61
COL4A5P29400 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
COL4A5P29400 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
COL4A5P29400 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
COL4A5P29400 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
COL4A5P29400 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
COL4A5P29400 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
COL4A5P29400 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.97□□□□□ -1.61
COL4A5P29400 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
COL4A5P29400 MIR30B-201ENST00000384850 88 ntBASIC4.97□□□□□ -1.61
COL4A5P29400 MIR491-201ENST00000384877 84 ntBASIC4.97□□□□□ -1.61
COL4A5P29400 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC4.97□□□□□ -1.61
COL4A5P29400 AL358472.1-201ENST00000431295 329 ntBASIC4.97□□□□□ -1.61
COL4A5P29400 RPS3AP12-201ENST00000443616 753 ntBASIC4.97□□□□□ -1.61
COL4A5P29400 AC104306.1-201ENST00000449702 371 ntBASIC4.97□□□□□ -1.61
COL4A5P29400 RPS20P21-201ENST00000466859 343 ntBASIC4.97□□□□□ -1.61
COL4A5P29400 AC093853.1-201ENST00000515689 483 ntBASIC4.97□□□□□ -1.61
COL4A5P29400 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.97□□□□□ -1.61
COL4A5P29400 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
COL4A5P29400 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
COL4A5P29400 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC4.97□□□□□ -1.61
COL4A5P29400 AC021242.1-201ENST00000507315 2035 ntBASIC4.97□□□□□ -1.61
COL4A5P29400 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
COL4A5P29400 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.97□□□□□ -1.61
COL4A5P29400 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
COL4A5P29400 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
COL4A5P29400 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.97□□□□□ -1.61
COL4A5P29400 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.97□□□□□ -1.61
COL4A5P29400 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
COL4A5P29400 AL929601.4-201ENST00000613011 1341 ntBASIC4.97□□□□□ -1.61
COL4A5P29400 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.96□□□□□ -1.61
COL4A5P29400 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.96□□□□□ -1.61
COL4A5P29400 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC4.96□□□□□ -1.61
COL4A5P29400 AP001002.1-201ENST00000625148 1513 ntBASIC4.96□□□□□ -1.61
COL4A5P29400 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.96□□□□□ -1.61
COL4A5P29400 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
COL4A5P29400 AC007066.1-201ENST00000392902 381 ntBASIC4.96□□□□□ -1.61
COL4A5P29400 PTMAP5-201ENST00000393073 333 ntBASIC4.96□□□□□ -1.61
COL4A5P29400 EIF1P3-201ENST00000423841 334 ntBASIC4.96□□□□□ -1.61
COL4A5P29400 DNAJA1P1-201ENST00000425106 1187 ntBASIC4.96□□□□□ -1.61
COL4A5P29400 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC4.96□□□□□ -1.61
COL4A5P29400 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC4.96□□□□□ -1.61
COL4A5P29400 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
COL4A5P29400 AC092691.2-201ENST00000461787 803 ntBASIC4.96□□□□□ -1.61
COL4A5P29400 PLGLA-201ENST00000465668 449 ntBASIC4.96□□□□□ -1.61
COL4A5P29400 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC4.96□□□□□ -1.61
COL4A5P29400 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
COL4A5P29400 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC4.96□□□□□ -1.61
COL4A5P29400 RNU1-95P-201ENST00000516357 160 ntBASIC4.96□□□□□ -1.61
COL4A5P29400 RNU1-128P-201ENST00000516704 160 ntBASIC4.96□□□□□ -1.61
COL4A5P29400 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC4.96□□□□□ -1.61
COL4A5P29400 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC4.96□□□□□ -1.61
COL4A5P29400 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.96□□□□□ -1.61
COL4A5P29400 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC4.96□□□□□ -1.61
COL4A5P29400 NPM1P5-201ENST00000557228 838 ntBASIC4.96□□□□□ -1.61
COL4A5P29400 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC4.96□□□□□ -1.61
COL4A5P29400 AC234782.5-201ENST00000617723 324 ntBASIC4.96□□□□□ -1.61
COL4A5P29400 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.96□□□□□ -1.61
COL4A5P29400 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.96□□□□□ -1.62
COL4A5P29400 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.96□□□□□ -1.62
COL4A5P29400 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.96□□□□□ -1.62
COL4A5P29400 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.96□□□□□ -1.62
COL4A5P29400 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
COL4A5P29400 CASC19-204ENST00000641001 2055 ntBASIC4.96□□□□□ -1.62
COL4A5P29400 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC4.96□□□□□ -1.62
COL4A5P29400 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
COL4A5P29400 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
COL4A5P29400 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
COL4A5P29400 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
COL4A5P29400 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC4.96□□□□□ -1.62
COL4A5P29400 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC4.96□□□□□ -1.62
COL4A5P29400 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
COL4A5P29400 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC4.96□□□□□ -1.62
COL4A5P29400 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.96□□□□□ -1.62
COL4A5P29400 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC4.96□□□□□ -1.62
COL4A5P29400 FCF1P7-201ENST00000451185 558 ntBASIC4.96□□□□□ -1.62
COL4A5P29400 AL139099.1-201ENST00000497398 403 ntBASIC4.96□□□□□ -1.62
COL4A5P29400 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC4.96□□□□□ -1.62
COL4A5P29400 RNA5SP303-201ENST00000516192 130 ntBASIC4.96□□□□□ -1.62
COL4A5P29400 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.96□□□□□ -1.62
COL4A5P29400 PTS-202ENST00000524931 696 ntTSL 3 BASIC4.96□□□□□ -1.62
COL4A5P29400 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.96□□□□□ -1.62
COL4A5P29400 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
COL4A5P29400 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.96□□□□□ -1.62
COL4A5P29400 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.96□□□□□ -1.62
COL4A5P29400 AC005412.1-201ENST00000580812 1049 ntBASIC4.96□□□□□ -1.62
COL4A5P29400 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC4.96□□□□□ -1.62
COL4A5P29400 AL034408.1-202ENST00000636088 415 ntBASIC4.96□□□□□ -1.62
COL4A5P29400 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC4.96□□□□□ -1.62
COL4A5P29400 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
COL4A5P29400 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC4.96□□□□□ -1.62
COL4A5P29400 AC104623.2-202ENST00000623477 4002 ntBASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms