Protein–RNA interactions for Protein: P22415

USF1, Upstream stimulatory factor 1, humanhuman

Predicted RBP Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF1P22415 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
USF1P22415 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC3.97□□□□□ -1.77
USF1P22415 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC3.97□□□□□ -1.77
USF1P22415 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
USF1P22415 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
USF1P22415 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC3.97□□□□□ -1.77
USF1P22415 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
USF1P22415 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC3.97□□□□□ -1.77
USF1P22415 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
USF1P22415 RNU6-386P-201ENST00000362650 107 ntBASIC3.97□□□□□ -1.77
USF1P22415 SNORA71.2-201ENST00000364941 134 ntBASIC3.97□□□□□ -1.77
USF1P22415 U3.22-201ENST00000391120 215 ntBASIC3.97□□□□□ -1.77
USF1P22415 IL6-203ENST00000401651 539 ntTSL 2 BASIC3.97□□□□□ -1.77
USF1P22415 RPS24P12-201ENST00000402084 394 ntBASIC3.97□□□□□ -1.77
USF1P22415 NCSTNP1-201ENST00000406229 144 ntBASIC3.97□□□□□ -1.77
USF1P22415 AL591848.1-201ENST00000413092 322 ntBASIC3.97□□□□□ -1.77
USF1P22415 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC3.97□□□□□ -1.77
USF1P22415 EIF4A1P1-201ENST00000420241 934 ntBASIC3.97□□□□□ -1.77
USF1P22415 UQCRBP1-201ENST00000421129 336 ntBASIC3.97□□□□□ -1.77
USF1P22415 OR6K4P-201ENST00000423179 955 ntBASIC3.97□□□□□ -1.77
USF1P22415 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC3.97□□□□□ -1.77
USF1P22415 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC3.97□□□□□ -1.77
USF1P22415 NMNAT1P2-201ENST00000435192 860 ntBASIC3.97□□□□□ -1.77
USF1P22415 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC3.97□□□□□ -1.77
USF1P22415 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC3.97□□□□□ -1.77
USF1P22415 AC090686.1-201ENST00000481577 749 ntBASIC3.97□□□□□ -1.77
USF1P22415 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
USF1P22415 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC3.97□□□□□ -1.77
USF1P22415 AC091868.1-201ENST00000508746 304 ntBASIC3.97□□□□□ -1.77
USF1P22415 RN7SKP122-201ENST00000515923 296 ntBASIC3.97□□□□□ -1.77
USF1P22415 IGHV3-63-201ENST00000518422 341 ntBASIC3.97□□□□□ -1.77
USF1P22415 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC3.97□□□□□ -1.77
USF1P22415 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC3.97□□□□□ -1.77
USF1P22415 NPM1P35-201ENST00000533043 868 ntBASIC3.97□□□□□ -1.77
USF1P22415 PDCD5P1-201ENST00000543528 309 ntBASIC3.97□□□□□ -1.77
USF1P22415 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC3.97□□□□□ -1.77
USF1P22415 RN7SL652P-201ENST00000577769 300 ntBASIC3.97□□□□□ -1.77
USF1P22415 MIR5699-201ENST00000578903 90 ntBASIC3.97□□□□□ -1.77
USF1P22415 AC009303.3-201ENST00000591103 736 ntBASIC3.97□□□□□ -1.77
USF1P22415 AC005191.1-201ENST00000603950 358 ntBASIC3.97□□□□□ -1.77
USF1P22415 OR7A19P-201ENST00000608051 733 ntBASIC3.97□□□□□ -1.77
USF1P22415 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC3.97□□□□□ -1.77
USF1P22415 AC107905.1-201ENST00000616204 426 ntBASIC3.97□□□□□ -1.77
USF1P22415 AL022401.1-201ENST00000619498 108 ntBASIC3.97□□□□□ -1.77
USF1P22415 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
USF1P22415 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC3.97□□□□□ -1.77
USF1P22415 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
USF1P22415 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC3.97□□□□□ -1.77
USF1P22415 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
USF1P22415 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
USF1P22415 AC092435.4-201ENST00000623012 4159 ntBASIC3.97□□□□□ -1.77
USF1P22415 OR56B2P-202ENST00000641377 2453 ntBASIC3.97□□□□□ -1.77
USF1P22415 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
USF1P22415 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
USF1P22415 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC3.97□□□□□ -1.77
USF1P22415 TLK1P1-201ENST00000456760 2440 ntBASIC3.96□□□□□ -1.77
USF1P22415 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC3.96□□□□□ -1.77
USF1P22415 CASC19-206ENST00000641028 1430 ntBASIC3.96□□□□□ -1.77
USF1P22415 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
USF1P22415 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC3.96□□□□□ -1.78
USF1P22415 RNU4-39P-201ENST00000362455 127 ntBASIC3.96□□□□□ -1.78
USF1P22415 RNU6-178P-201ENST00000384631 104 ntBASIC3.96□□□□□ -1.78
USF1P22415 Z98745.1-201ENST00000402553 494 ntBASIC3.96□□□□□ -1.78
USF1P22415 AP000580.1-201ENST00000404439 358 ntBASIC3.96□□□□□ -1.78
USF1P22415 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
USF1P22415 ELOCP19-201ENST00000411919 318 ntBASIC3.96□□□□□ -1.78
USF1P22415 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC3.96□□□□□ -1.78
USF1P22415 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC3.96□□□□□ -1.78
USF1P22415 AC007064.3-201ENST00000422608 359 ntBASIC3.96□□□□□ -1.78
USF1P22415 RPL12P34-201ENST00000424532 479 ntBASIC3.96□□□□□ -1.78
USF1P22415 IPMKP1-201ENST00000425988 855 ntBASIC3.96□□□□□ -1.78
USF1P22415 RSL24D1P6-201ENST00000426934 401 ntBASIC3.96□□□□□ -1.78
USF1P22415 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC3.96□□□□□ -1.78
USF1P22415 AL451139.1-201ENST00000434718 346 ntBASIC3.96□□□□□ -1.78
USF1P22415 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC3.96□□□□□ -1.78
USF1P22415 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC3.96□□□□□ -1.78
USF1P22415 AL357520.1-201ENST00000441557 453 ntBASIC3.96□□□□□ -1.78
USF1P22415 H2AFZP5-201ENST00000446960 382 ntBASIC3.96□□□□□ -1.78
USF1P22415 AL157884.3-201ENST00000448273 1184 ntBASIC3.96□□□□□ -1.78
USF1P22415 BUD31P2-201ENST00000449374 300 ntBASIC3.96□□□□□ -1.78
USF1P22415 UBA52P3-201ENST00000491303 382 ntBASIC3.96□□□□□ -1.78
USF1P22415 RN7SL558P-201ENST00000497468 299 ntBASIC3.96□□□□□ -1.78
USF1P22415 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC3.96□□□□□ -1.78
USF1P22415 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC3.96□□□□□ -1.78
USF1P22415 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC3.96□□□□□ -1.78
USF1P22415 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC3.96□□□□□ -1.78
USF1P22415 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC3.96□□□□□ -1.78
USF1P22415 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC3.96□□□□□ -1.78
USF1P22415 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC3.96□□□□□ -1.78
USF1P22415 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC3.96□□□□□ -1.78
USF1P22415 AL590392.1-201ENST00000604960 446 ntBASIC3.96□□□□□ -1.78
USF1P22415 AL353600.1-201ENST00000608148 251 ntBASIC3.96□□□□□ -1.78
USF1P22415 MLECP1-201ENST00000615893 709 ntBASIC3.96□□□□□ -1.78
USF1P22415 AL121873.1-201ENST00000616013 524 ntBASIC3.96□□□□□ -1.78
USF1P22415 AL035461.2-201ENST00000619201 524 ntBASIC3.96□□□□□ -1.78
USF1P22415 AC092159.4-201ENST00000624944 550 ntBASIC3.96□□□□□ -1.78
USF1P22415 AL049536.1-201ENST00000625043 744 ntBASIC3.96□□□□□ -1.78
USF1P22415 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
USF1P22415 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
USF1P22415 SMG1P6-201ENST00000532337 2930 ntBASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms