Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC7.26□□□□□ -1.25
TOP2AP11388 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC7.26□□□□□ -1.25
TOP2AP11388 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC7.26□□□□□ -1.25
TOP2AP11388 RPL7P58-201ENST00000402913 758 ntBASIC7.26□□□□□ -1.25
TOP2AP11388 RPS4XP15-201ENST00000489210 795 ntBASIC7.26□□□□□ -1.25
TOP2AP11388 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
TOP2AP11388 RN7SKP157-201ENST00000516174 282 ntBASIC7.26□□□□□ -1.25
TOP2AP11388 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
TOP2AP11388 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC7.26□□□□□ -1.25
TOP2AP11388 PCAT14-202ENST00000627127 3935 ntBASIC7.26□□□□□ -1.25
TOP2AP11388 AL133268.1-201ENST00000405676 1401 ntBASIC7.26□□□□□ -1.25
TOP2AP11388 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
TOP2AP11388 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
TOP2AP11388 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
TOP2AP11388 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
TOP2AP11388 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC7.25□□□□□ -1.25
TOP2AP11388 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
TOP2AP11388 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC7.25□□□□□ -1.25
TOP2AP11388 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC7.25□□□□□ -1.25
TOP2AP11388 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC7.25□□□□□ -1.25
TOP2AP11388 AC091286.1-201ENST00000431233 461 ntBASIC7.25□□□□□ -1.25
TOP2AP11388 AL358472.1-201ENST00000431295 329 ntBASIC7.25□□□□□ -1.25
TOP2AP11388 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
TOP2AP11388 FAM91A3P-201ENST00000456826 2544 ntBASIC7.25□□□□□ -1.25
TOP2AP11388 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC7.25□□□□□ -1.25
TOP2AP11388 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC7.25□□□□□ -1.25
TOP2AP11388 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC7.25□□□□□ -1.25
TOP2AP11388 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC7.25□□□□□ -1.25
TOP2AP11388 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC7.25□□□□□ -1.25
TOP2AP11388 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC7.25□□□□□ -1.25
TOP2AP11388 MIR6868-201ENST00000611215 58 ntBASIC7.25□□□□□ -1.25
TOP2AP11388 FP236240.3-201ENST00000623061 327 ntBASIC7.25□□□□□ -1.25
TOP2AP11388 AC005086.4-201ENST00000623065 213 ntBASIC7.25□□□□□ -1.25
TOP2AP11388 AC009093.8-201ENST00000641769 292 ntBASIC7.25□□□□□ -1.25
TOP2AP11388 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC7.25□□□□□ -1.25
TOP2AP11388 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC7.25□□□□□ -1.25
TOP2AP11388 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
TOP2AP11388 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC7.25□□□□□ -1.25
TOP2AP11388 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC7.25□□□□□ -1.25
TOP2AP11388 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
TOP2AP11388 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
TOP2AP11388 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
TOP2AP11388 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC7.24□□□□□ -1.25
TOP2AP11388 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC7.24□□□□□ -1.25
TOP2AP11388 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
TOP2AP11388 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
TOP2AP11388 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC7.24□□□□□ -1.25
TOP2AP11388 RAB9AP3-201ENST00000412737 573 ntBASIC7.24□□□□□ -1.25
TOP2AP11388 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC7.24□□□□□ -1.25
TOP2AP11388 RPS27AP15-201ENST00000447672 466 ntBASIC7.24□□□□□ -1.25
TOP2AP11388 RAB9AP1-201ENST00000449393 573 ntBASIC7.24□□□□□ -1.25
TOP2AP11388 RPS20P21-201ENST00000466859 343 ntBASIC7.24□□□□□ -1.25
TOP2AP11388 HPRT1P2-201ENST00000505250 544 ntBASIC7.24□□□□□ -1.25
TOP2AP11388 AC026726.1-201ENST00000512859 601 ntBASIC7.24□□□□□ -1.25
TOP2AP11388 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC7.24□□□□□ -1.25
TOP2AP11388 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC7.24□□□□□ -1.25
TOP2AP11388 AL606490.9-201ENST00000603331 271 ntBASIC7.24□□□□□ -1.25
TOP2AP11388 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC7.24□□□□□ -1.25
TOP2AP11388 AC067931.1-201ENST00000624190 671 ntBASIC7.24□□□□□ -1.25
TOP2AP11388 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC7.24□□□□□ -1.25
TOP2AP11388 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC7.24□□□□□ -1.25
TOP2AP11388 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
TOP2AP11388 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC7.24□□□□□ -1.25
TOP2AP11388 AL049781.1-201ENST00000623195 3585 ntBASIC7.24□□□□□ -1.25
TOP2AP11388 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC7.24□□□□□ -1.25
TOP2AP11388 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
TOP2AP11388 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
TOP2AP11388 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
TOP2AP11388 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC7.23□□□□□ -1.25
TOP2AP11388 RNA5SP22-201ENST00000365393 109 ntBASIC7.23□□□□□ -1.25
TOP2AP11388 SNORA5A-201ENST00000384111 134 ntBASIC7.23□□□□□ -1.25
TOP2AP11388 RPL7P15-201ENST00000461190 712 ntBASIC7.23□□□□□ -1.25
TOP2AP11388 DEFB109A-201ENST00000482450 265 ntBASIC7.23□□□□□ -1.25
TOP2AP11388 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC7.23□□□□□ -1.25
TOP2AP11388 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC7.23□□□□□ -1.25
TOP2AP11388 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC7.23□□□□□ -1.25
TOP2AP11388 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC7.23□□□□□ -1.25
TOP2AP11388 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
TOP2AP11388 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
TOP2AP11388 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC7.23□□□□□ -1.25
TOP2AP11388 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC7.23□□□□□ -1.25
TOP2AP11388 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
TOP2AP11388 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC7.23□□□□□ -1.25
TOP2AP11388 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
TOP2AP11388 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
TOP2AP11388 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
TOP2AP11388 SNORA11.1-201ENST00000408133 129 ntBASIC7.22□□□□□ -1.25
TOP2AP11388 RN7SKP156-201ENST00000410308 342 ntBASIC7.22□□□□□ -1.25
TOP2AP11388 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC7.22□□□□□ -1.25
TOP2AP11388 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC7.22□□□□□ -1.25
TOP2AP11388 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC7.22□□□□□ -1.25
TOP2AP11388 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC7.22□□□□□ -1.25
TOP2AP11388 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC7.22□□□□□ -1.25
TOP2AP11388 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC7.22□□□□□ -1.25
TOP2AP11388 AC109635.6-201ENST00000525487 1113 ntBASIC7.22□□□□□ -1.25
TOP2AP11388 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC7.22□□□□□ -1.25
TOP2AP11388 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC7.22□□□□□ -1.25
TOP2AP11388 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC7.22□□□□□ -1.25
TOP2AP11388 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
TOP2AP11388 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms