Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 SUMO2P4-201ENST00000504193 276 ntBASIC7.89□□□□□ -1.15
CSB-PGBD3P0DP91 AC147055.4-201ENST00000504399 745 ntBASIC7.89□□□□□ -1.15
CSB-PGBD3P0DP91 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC7.89□□□□□ -1.15
CSB-PGBD3P0DP91 HMGB3P13-201ENST00000511263 607 ntBASIC7.89□□□□□ -1.15
CSB-PGBD3P0DP91 AC046134.1-201ENST00000514454 666 ntBASIC7.89□□□□□ -1.15
CSB-PGBD3P0DP91 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC7.89□□□□□ -1.15
CSB-PGBD3P0DP91 AC087808.1-201ENST00000520501 361 ntBASIC7.89□□□□□ -1.15
CSB-PGBD3P0DP91 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC7.89□□□□□ -1.15
CSB-PGBD3P0DP91 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC7.89□□□□□ -1.15
CSB-PGBD3P0DP91 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC7.89□□□□□ -1.15
CSB-PGBD3P0DP91 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC7.89□□□□□ -1.15
CSB-PGBD3P0DP91 AC007954.1-201ENST00000554198 494 ntBASIC7.89□□□□□ -1.15
CSB-PGBD3P0DP91 ZNF519P2-201ENST00000557032 169 ntBASIC7.89□□□□□ -1.15
CSB-PGBD3P0DP91 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC7.89□□□□□ -1.15
CSB-PGBD3P0DP91 AC009063.1-201ENST00000563342 702 ntBASIC7.89□□□□□ -1.15
CSB-PGBD3P0DP91 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC7.89□□□□□ -1.15
CSB-PGBD3P0DP91 AC018714.1-201ENST00000605028 208 ntBASIC7.89□□□□□ -1.15
CSB-PGBD3P0DP91 AC112220.3-201ENST00000605502 502 ntBASIC7.89□□□□□ -1.15
CSB-PGBD3P0DP91 AC055876.5-201ENST00000605667 259 ntBASIC7.89□□□□□ -1.15
CSB-PGBD3P0DP91 AL136295.6-201ENST00000610486 658 ntBASIC7.89□□□□□ -1.15
CSB-PGBD3P0DP91 AL139099.4-201ENST00000614802 114 ntBASIC7.89□□□□□ -1.15
CSB-PGBD3P0DP91 AC118658.2-201ENST00000618697 459 ntBASIC7.89□□□□□ -1.15
CSB-PGBD3P0DP91 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
CSB-PGBD3P0DP91 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
CSB-PGBD3P0DP91 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC7.89□□□□□ -1.15
CSB-PGBD3P0DP91 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC7.88□□□□□ -1.15
CSB-PGBD3P0DP91 AC011369.2-201ENST00000624423 1567 ntBASIC7.88□□□□□ -1.15
CSB-PGBD3P0DP91 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
CSB-PGBD3P0DP91 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC7.88□□□□□ -1.15
CSB-PGBD3P0DP91 AC093311.1-201ENST00000506586 2021 ntBASIC7.88□□□□□ -1.15
CSB-PGBD3P0DP91 ARHGAP42P1-201ENST00000507474 1976 ntBASIC7.88□□□□□ -1.15
CSB-PGBD3P0DP91 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
CSB-PGBD3P0DP91 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC7.88□□□□□ -1.15
CSB-PGBD3P0DP91 CAST-202ENST00000325674 3356 ntTSL 5 BASIC7.88□□□□□ -1.15
CSB-PGBD3P0DP91 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
CSB-PGBD3P0DP91 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
CSB-PGBD3P0DP91 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
CSB-PGBD3P0DP91 AC138393.2-201ENST00000414742 246 ntBASIC7.88□□□□□ -1.15
CSB-PGBD3P0DP91 UBTFL3-201ENST00000418934 1024 ntBASIC7.88□□□□□ -1.15
CSB-PGBD3P0DP91 RPS4XP5-201ENST00000419038 768 ntBASIC7.88□□□□□ -1.15
CSB-PGBD3P0DP91 AL136231.1-201ENST00000429407 730 ntBASIC7.88□□□□□ -1.15
CSB-PGBD3P0DP91 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC7.88□□□□□ -1.15
CSB-PGBD3P0DP91 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC7.88□□□□□ -1.15
CSB-PGBD3P0DP91 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC7.88□□□□□ -1.15
CSB-PGBD3P0DP91 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC7.88□□□□□ -1.15
CSB-PGBD3P0DP91 NANOGNBP1-201ENST00000448444 480 ntBASIC7.88□□□□□ -1.15
CSB-PGBD3P0DP91 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC7.88□□□□□ -1.15
CSB-PGBD3P0DP91 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC7.88□□□□□ -1.15
CSB-PGBD3P0DP91 VPS26AP1-201ENST00000483197 979 ntBASIC7.88□□□□□ -1.15
CSB-PGBD3P0DP91 AC093270.2-201ENST00000486157 792 ntBASIC7.88□□□□□ -1.15
CSB-PGBD3P0DP91 NCOR1P1-202ENST00000486162 291 ntBASIC7.88□□□□□ -1.15
CSB-PGBD3P0DP91 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC7.88□□□□□ -1.15
CSB-PGBD3P0DP91 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC7.88□□□□□ -1.15
CSB-PGBD3P0DP91 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC7.88□□□□□ -1.15
CSB-PGBD3P0DP91 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC7.88□□□□□ -1.15
CSB-PGBD3P0DP91 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC7.88□□□□□ -1.15
CSB-PGBD3P0DP91 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC7.88□□□□□ -1.15
CSB-PGBD3P0DP91 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC7.88□□□□□ -1.15
CSB-PGBD3P0DP91 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC7.88□□□□□ -1.15
CSB-PGBD3P0DP91 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC7.88□□□□□ -1.15
CSB-PGBD3P0DP91 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC7.88□□□□□ -1.15
CSB-PGBD3P0DP91 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC7.88□□□□□ -1.15
CSB-PGBD3P0DP91 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC7.88□□□□□ -1.15
CSB-PGBD3P0DP91 AC103881.1-201ENST00000603476 538 ntBASIC7.88□□□□□ -1.15
CSB-PGBD3P0DP91 AC069209.1-201ENST00000619282 651 ntBASIC7.88□□□□□ -1.15
CSB-PGBD3P0DP91 AP005264.7-201ENST00000625003 745 ntBASIC7.88□□□□□ -1.15
CSB-PGBD3P0DP91 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC7.88□□□□□ -1.15
CSB-PGBD3P0DP91 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
CSB-PGBD3P0DP91 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC7.88□□□□□ -1.15
CSB-PGBD3P0DP91 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
CSB-PGBD3P0DP91 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC7.88□□□□□ -1.15
CSB-PGBD3P0DP91 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC7.88□□□□□ -1.15
CSB-PGBD3P0DP91 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
CSB-PGBD3P0DP91 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC7.88□□□□□ -1.15
CSB-PGBD3P0DP91 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
CSB-PGBD3P0DP91 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC7.88□□□□□ -1.15
CSB-PGBD3P0DP91 AL590763.1-201ENST00000398297 1545 ntBASIC7.88□□□□□ -1.15
CSB-PGBD3P0DP91 AC096921.2-201ENST00000561507 1916 ntBASIC7.88□□□□□ -1.15
CSB-PGBD3P0DP91 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC7.87□□□□□ -1.15
CSB-PGBD3P0DP91 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
CSB-PGBD3P0DP91 GAS2-201ENST00000278187 2170 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
CSB-PGBD3P0DP91 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC7.87□□□□□ -1.15
CSB-PGBD3P0DP91 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC7.87□□□□□ -1.15
CSB-PGBD3P0DP91 DCAF13P3-201ENST00000561147 1334 ntBASIC7.87□□□□□ -1.15
CSB-PGBD3P0DP91 AC007996.1-201ENST00000620414 2821 ntBASIC7.87□□□□□ -1.15
CSB-PGBD3P0DP91 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC7.87□□□□□ -1.15
CSB-PGBD3P0DP91 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
CSB-PGBD3P0DP91 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC7.87□□□□□ -1.15
CSB-PGBD3P0DP91 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
CSB-PGBD3P0DP91 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
CSB-PGBD3P0DP91 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC7.87□□□□□ -1.15
CSB-PGBD3P0DP91 MIR640-201ENST00000385086 96 ntBASIC7.87□□□□□ -1.15
CSB-PGBD3P0DP91 AL136131.1-201ENST00000406079 803 ntBASIC7.87□□□□□ -1.15
CSB-PGBD3P0DP91 AL139098.1-201ENST00000407291 389 ntBASIC7.87□□□□□ -1.15
CSB-PGBD3P0DP91 LSM5-205ENST00000409952 687 ntTSL 4 BASIC7.87□□□□□ -1.15
CSB-PGBD3P0DP91 AC114814.2-201ENST00000419195 485 ntBASIC7.87□□□□□ -1.15
CSB-PGBD3P0DP91 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC7.87□□□□□ -1.15
CSB-PGBD3P0DP91 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC7.87□□□□□ -1.15
CSB-PGBD3P0DP91 CYCSP46-201ENST00000423569 204 ntBASIC7.87□□□□□ -1.15
CSB-PGBD3P0DP91 AL009174.1-201ENST00000426577 416 ntBASIC7.87□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms