Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.64□□□□□ -1.67
APOEP02649 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.64□□□□□ -1.67
APOEP02649 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
APOEP02649 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
APOEP02649 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.64□□□□□ -1.67
APOEP02649 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
APOEP02649 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
APOEP02649 GCNT6-201ENST00000379591 934 ntBASIC4.64□□□□□ -1.67
APOEP02649 RNU1-63P-201ENST00000383902 164 ntBASIC4.64□□□□□ -1.67
APOEP02649 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
APOEP02649 AC016397.1-201ENST00000412463 242 ntBASIC4.64□□□□□ -1.67
APOEP02649 FAR2P2-201ENST00000413041 594 ntBASIC4.64□□□□□ -1.67
APOEP02649 PTP4A1P1-201ENST00000420539 515 ntBASIC4.64□□□□□ -1.67
APOEP02649 AC062016.2-201ENST00000420950 676 ntBASIC4.64□□□□□ -1.67
APOEP02649 PDSS1P1-201ENST00000422953 1114 ntBASIC4.64□□□□□ -1.67
APOEP02649 FAR2P4-202ENST00000425399 584 ntBASIC4.64□□□□□ -1.67
APOEP02649 CCNB1IP1P2-201ENST00000432876 818 ntBASIC4.64□□□□□ -1.67
APOEP02649 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.64□□□□□ -1.67
APOEP02649 AL121877.1-201ENST00000453704 622 ntBASIC4.64□□□□□ -1.67
APOEP02649 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.64□□□□□ -1.67
APOEP02649 AC010469.1-201ENST00000463864 576 ntBASIC4.64□□□□□ -1.67
APOEP02649 RN7SL481P-201ENST00000477764 299 ntBASIC4.64□□□□□ -1.67
APOEP02649 AC012158.1-204ENST00000483430 465 ntBASIC4.64□□□□□ -1.67
APOEP02649 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
APOEP02649 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC4.64□□□□□ -1.67
APOEP02649 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC4.64□□□□□ -1.67
APOEP02649 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC4.64□□□□□ -1.67
APOEP02649 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC4.64□□□□□ -1.67
APOEP02649 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.64□□□□□ -1.67
APOEP02649 AC009643.1-201ENST00000532030 391 ntBASIC4.64□□□□□ -1.67
APOEP02649 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.64□□□□□ -1.67
APOEP02649 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC4.64□□□□□ -1.67
APOEP02649 MIR4675-201ENST00000577898 77 ntBASIC4.64□□□□□ -1.67
APOEP02649 MIR4284-201ENST00000578924 81 ntBASIC4.64□□□□□ -1.67
APOEP02649 AC005191.1-201ENST00000603950 358 ntBASIC4.64□□□□□ -1.67
APOEP02649 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.64□□□□□ -1.67
APOEP02649 AC090948.1-201ENST00000607464 549 ntBASIC4.64□□□□□ -1.67
APOEP02649 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.64□□□□□ -1.67
APOEP02649 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.64□□□□□ -1.67
APOEP02649 OR2L1P-202ENST00000641567 1023 ntBASIC4.64□□□□□ -1.67
APOEP02649 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
APOEP02649 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
APOEP02649 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
APOEP02649 TOPORSLP1-201ENST00000467693 2102 ntBASIC4.64□□□□□ -1.67
APOEP02649 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.64□□□□□ -1.67
APOEP02649 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC4.64□□□□□ -1.67
APOEP02649 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.64□□□□□ -1.67
APOEP02649 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.63□□□□□ -1.67
APOEP02649 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.63□□□□□ -1.67
APOEP02649 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
APOEP02649 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC4.63□□□□□ -1.67
APOEP02649 HCFC2P1-201ENST00000392864 1592 ntBASIC4.63□□□□□ -1.67
APOEP02649 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
APOEP02649 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.63□□□□□ -1.67
APOEP02649 RNA5SP443-201ENST00000363083 132 ntBASIC4.63□□□□□ -1.67
APOEP02649 RN7SKP167-201ENST00000411047 285 ntBASIC4.63□□□□□ -1.67
APOEP02649 ELOCP19-201ENST00000411919 318 ntBASIC4.63□□□□□ -1.67
APOEP02649 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.63□□□□□ -1.67
APOEP02649 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.63□□□□□ -1.67
APOEP02649 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.63□□□□□ -1.67
APOEP02649 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.63□□□□□ -1.67
APOEP02649 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.63□□□□□ -1.67
APOEP02649 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC4.63□□□□□ -1.67
APOEP02649 MYL12AP1-201ENST00000518490 515 ntBASIC4.63□□□□□ -1.67
APOEP02649 AL356218.2-201ENST00000605264 187 ntBASIC4.63□□□□□ -1.67
APOEP02649 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
APOEP02649 AC245100.2-201ENST00000454544 1679 ntBASIC4.63□□□□□ -1.67
APOEP02649 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
APOEP02649 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.63□□□□□ -1.67
APOEP02649 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
APOEP02649 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
APOEP02649 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.63□□□□□ -1.67
APOEP02649 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.63□□□□□ -1.67
APOEP02649 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
APOEP02649 AC139713.2-214ENST00000642059 1811 ntBASIC4.62□□□□□ -1.67
APOEP02649 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
APOEP02649 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.62□□□□□ -1.67
APOEP02649 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
APOEP02649 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
APOEP02649 AC017104.4-201ENST00000636283 1592 ntBASIC4.62□□□□□ -1.67
APOEP02649 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
APOEP02649 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
APOEP02649 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.62□□□□□ -1.67
APOEP02649 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.62□□□□□ -1.67
APOEP02649 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
APOEP02649 RNA5SP502-201ENST00000362694 119 ntBASIC4.62□□□□□ -1.67
APOEP02649 ADIG-201ENST00000373348 430 ntTSL 2 BASIC4.62□□□□□ -1.67
APOEP02649 HSPD1P16-201ENST00000402302 394 ntBASIC4.62□□□□□ -1.67
APOEP02649 AL139039.2-201ENST00000407436 479 ntBASIC4.62□□□□□ -1.67
APOEP02649 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC4.62□□□□□ -1.67
APOEP02649 SNRPFP1-201ENST00000414761 252 ntBASIC4.62□□□□□ -1.67
APOEP02649 TMSB10P2-201ENST00000416049 131 ntBASIC4.62□□□□□ -1.67
APOEP02649 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.62□□□□□ -1.67
APOEP02649 RPL12P34-201ENST00000424532 479 ntBASIC4.62□□□□□ -1.67
APOEP02649 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
APOEP02649 AC090013.1-201ENST00000485147 480 ntBASIC4.62□□□□□ -1.67
APOEP02649 AGGF1P3-201ENST00000493675 1213 ntBASIC4.62□□□□□ -1.67
APOEP02649 RPS6P4-201ENST00000494693 758 ntBASIC4.62□□□□□ -1.67
APOEP02649 AC093840.1-201ENST00000511599 336 ntBASIC4.62□□□□□ -1.67
APOEP02649 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms