Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 SEC63P1-201ENST00000425785 1258 ntBASIC4.44□□□□□ -1.7
LSM1O15116 DYNLL1P7-201ENST00000429273 258 ntBASIC4.44□□□□□ -1.7
LSM1O15116 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
LSM1O15116 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC4.44□□□□□ -1.7
LSM1O15116 PA2G4P6-201ENST00000438325 1197 ntBASIC4.44□□□□□ -1.7
LSM1O15116 AL157884.3-201ENST00000448273 1184 ntBASIC4.44□□□□□ -1.7
LSM1O15116 IFNWP4-201ENST00000453148 294 ntBASIC4.44□□□□□ -1.7
LSM1O15116 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC4.44□□□□□ -1.7
LSM1O15116 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC4.44□□□□□ -1.7
LSM1O15116 AC108022.1-201ENST00000493466 478 ntBASIC4.44□□□□□ -1.7
LSM1O15116 RPL36AP41-201ENST00000493820 306 ntBASIC4.44□□□□□ -1.7
LSM1O15116 AC098799.3-201ENST00000506095 438 ntBASIC4.44□□□□□ -1.7
LSM1O15116 AC110775.1-201ENST00000513721 462 ntBASIC4.44□□□□□ -1.7
LSM1O15116 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC4.44□□□□□ -1.7
LSM1O15116 OR5AZ1P-201ENST00000527448 943 ntBASIC4.44□□□□□ -1.7
LSM1O15116 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.44□□□□□ -1.7
LSM1O15116 AC021006.3-201ENST00000530771 192 ntBASIC4.44□□□□□ -1.7
LSM1O15116 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC4.44□□□□□ -1.7
LSM1O15116 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC4.44□□□□□ -1.7
LSM1O15116 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
LSM1O15116 CBX3P5-201ENST00000552017 521 ntBASIC4.44□□□□□ -1.7
LSM1O15116 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.44□□□□□ -1.7
LSM1O15116 HNRNPCP4-201ENST00000571636 900 ntBASIC4.44□□□□□ -1.7
LSM1O15116 AC091178.1-203ENST00000584586 279 ntBASIC4.44□□□□□ -1.7
LSM1O15116 SLC25A36P1-201ENST00000590111 465 ntBASIC4.44□□□□□ -1.7
LSM1O15116 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.44□□□□□ -1.7
LSM1O15116 AC011487.3-201ENST00000593607 453 ntBASIC4.44□□□□□ -1.7
LSM1O15116 AC116447.1-201ENST00000613153 453 ntBASIC4.44□□□□□ -1.7
LSM1O15116 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
LSM1O15116 AL590410.1-201ENST00000617925 333 ntBASIC4.44□□□□□ -1.7
LSM1O15116 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.44□□□□□ -1.7
LSM1O15116 AL035461.2-201ENST00000619201 524 ntBASIC4.44□□□□□ -1.7
LSM1O15116 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.44□□□□□ -1.7
LSM1O15116 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
LSM1O15116 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
LSM1O15116 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
LSM1O15116 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.44□□□□□ -1.7
LSM1O15116 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
LSM1O15116 AL391684.1-202ENST00000641293 1636 ntBASIC4.43□□□□□ -1.7
LSM1O15116 AC087565.3-202ENST00000642085 1603 ntBASIC4.43□□□□□ -1.7
LSM1O15116 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.43□□□□□ -1.7
LSM1O15116 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.43□□□□□ -1.7
LSM1O15116 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
LSM1O15116 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.43□□□□□ -1.7
LSM1O15116 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
LSM1O15116 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
LSM1O15116 RNA5SP52-201ENST00000362448 134 ntBASIC4.43□□□□□ -1.7
LSM1O15116 RN7SKP115-201ENST00000363177 317 ntBASIC4.43□□□□□ -1.7
LSM1O15116 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC4.43□□□□□ -1.7
LSM1O15116 RNU6-603P-201ENST00000411403 107 ntBASIC4.43□□□□□ -1.7
LSM1O15116 AC019050.1-201ENST00000418508 492 ntBASIC4.43□□□□□ -1.7
LSM1O15116 OR6K4P-201ENST00000423179 955 ntBASIC4.43□□□□□ -1.7
LSM1O15116 NANOGP6-201ENST00000429190 847 ntBASIC4.43□□□□□ -1.7
LSM1O15116 MTCO3P21-201ENST00000430791 643 ntBASIC4.43□□□□□ -1.7
LSM1O15116 NRBF2P3-201ENST00000432731 865 ntBASIC4.43□□□□□ -1.7
LSM1O15116 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC4.43□□□□□ -1.7
LSM1O15116 CACYBPP1-201ENST00000438592 684 ntBASIC4.43□□□□□ -1.7
LSM1O15116 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC4.43□□□□□ -1.7
LSM1O15116 EXTL2P1-201ENST00000446218 416 ntBASIC4.43□□□□□ -1.7
LSM1O15116 AC239809.1-201ENST00000450470 217 ntBASIC4.43□□□□□ -1.7
LSM1O15116 AL935212.3-201ENST00000450729 284 ntBASIC4.43□□□□□ -1.7
LSM1O15116 AL133477.1-201ENST00000457472 514 ntBASIC4.43□□□□□ -1.7
LSM1O15116 S100A11P1-201ENST00000477525 312 ntBASIC4.43□□□□□ -1.7
LSM1O15116 STRADBP1-201ENST00000478954 1281 ntBASIC4.43□□□□□ -1.7
LSM1O15116 AC004815.1-201ENST00000484185 331 ntBASIC4.43□□□□□ -1.7
LSM1O15116 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC4.43□□□□□ -1.7
LSM1O15116 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC4.43□□□□□ -1.7
LSM1O15116 RNU6-347P-201ENST00000516658 105 ntBASIC4.43□□□□□ -1.7
LSM1O15116 IGHVIII-67-4-201ENST00000524281 296 ntBASIC4.43□□□□□ -1.7
LSM1O15116 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.43□□□□□ -1.7
LSM1O15116 AC007424.1-203ENST00000554613 687 ntBASIC4.43□□□□□ -1.7
LSM1O15116 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC4.43□□□□□ -1.7
LSM1O15116 RN7SL652P-201ENST00000577769 300 ntBASIC4.43□□□□□ -1.7
LSM1O15116 AC023762.1-201ENST00000603280 584 ntBASIC4.43□□□□□ -1.7
LSM1O15116 AC008966.2-201ENST00000606157 453 ntBASIC4.43□□□□□ -1.7
LSM1O15116 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.43□□□□□ -1.7
LSM1O15116 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC4.43□□□□□ -1.7
LSM1O15116 RPL23AP61-201ENST00000623642 466 ntBASIC4.43□□□□□ -1.7
LSM1O15116 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.43□□□□□ -1.7
LSM1O15116 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
LSM1O15116 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
LSM1O15116 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
LSM1O15116 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.43□□□□□ -1.7
LSM1O15116 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
LSM1O15116 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
LSM1O15116 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
LSM1O15116 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC4.43□□□□□ -1.7
LSM1O15116 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
LSM1O15116 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
LSM1O15116 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.42□□□□□ -1.7
LSM1O15116 RNA5SP191-201ENST00000362585 102 ntBASIC4.42□□□□□ -1.7
LSM1O15116 SNORA51.1-201ENST00000363243 140 ntBASIC4.42□□□□□ -1.7
LSM1O15116 RNA5SP507-201ENST00000363603 121 ntBASIC4.42□□□□□ -1.7
LSM1O15116 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.42□□□□□ -1.7
LSM1O15116 RNU6-146P-201ENST00000384602 108 ntBASIC4.42□□□□□ -1.7
LSM1O15116 RNU6-225P-201ENST00000384613 103 ntBASIC4.42□□□□□ -1.7
LSM1O15116 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
LSM1O15116 AL034374.1-201ENST00000406329 351 ntBASIC4.42□□□□□ -1.7
LSM1O15116 RN7SKP267-201ENST00000410381 285 ntBASIC4.42□□□□□ -1.7
LSM1O15116 RN7SKP167-201ENST00000411047 285 ntBASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 152.7 ms