Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.15□□□□□ -1.59
PCDH17O14917 MTND6P2-201ENST00000512226 524 ntBASIC5.15□□□□□ -1.59
PCDH17O14917 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC5.15□□□□□ -1.59
PCDH17O14917 AC023632.1-201ENST00000518463 375 ntBASIC5.15□□□□□ -1.59
PCDH17O14917 CDC42P3-201ENST00000518493 633 ntBASIC5.15□□□□□ -1.59
PCDH17O14917 AC008562.1-201ENST00000521763 330 ntBASIC5.15□□□□□ -1.59
PCDH17O14917 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC5.15□□□□□ -1.59
PCDH17O14917 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC5.15□□□□□ -1.59
PCDH17O14917 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC5.15□□□□□ -1.59
PCDH17O14917 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC5.15□□□□□ -1.59
PCDH17O14917 HAUS8P1-201ENST00000549005 542 ntBASIC5.15□□□□□ -1.59
PCDH17O14917 SETP1-201ENST00000556014 845 ntBASIC5.15□□□□□ -1.59
PCDH17O14917 AC044913.1-201ENST00000557200 430 ntBASIC5.15□□□□□ -1.59
PCDH17O14917 MTND3P13-201ENST00000574391 343 ntBASIC5.15□□□□□ -1.59
PCDH17O14917 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC5.15□□□□□ -1.59
PCDH17O14917 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
PCDH17O14917 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
PCDH17O14917 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC5.15□□□□□ -1.59
PCDH17O14917 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC5.15□□□□□ -1.59
PCDH17O14917 AC068790.7-201ENST00000602347 528 ntBASIC5.15□□□□□ -1.59
PCDH17O14917 AC007349.4-201ENST00000608114 532 ntBASIC5.15□□□□□ -1.59
PCDH17O14917 AL592148.2-201ENST00000612210 372 ntBASIC5.15□□□□□ -1.59
PCDH17O14917 AC231759.1-201ENST00000616455 597 ntBASIC5.15□□□□□ -1.59
PCDH17O14917 AL355493.4-201ENST00000618530 292 ntBASIC5.15□□□□□ -1.59
PCDH17O14917 AC018926.3-201ENST00000618841 406 ntBASIC5.15□□□□□ -1.59
PCDH17O14917 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC5.15□□□□□ -1.59
PCDH17O14917 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
PCDH17O14917 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
PCDH17O14917 AC092376.2-201ENST00000622621 4116 ntBASIC5.15□□□□□ -1.59
PCDH17O14917 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
PCDH17O14917 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.15□□□□□ -1.59
PCDH17O14917 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC5.15□□□□□ -1.59
PCDH17O14917 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.15□□□□□ -1.59
PCDH17O14917 AC133552.1-201ENST00000569988 4007 ntBASIC5.15□□□□□ -1.59
PCDH17O14917 AC009313.2-201ENST00000417893 1941 ntBASIC5.15□□□□□ -1.59
PCDH17O14917 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
PCDH17O14917 AC005261.4-201ENST00000600047 1385 ntBASIC5.15□□□□□ -1.59
PCDH17O14917 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
PCDH17O14917 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
PCDH17O14917 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.14□□□□□ -1.59
PCDH17O14917 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
PCDH17O14917 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
PCDH17O14917 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
PCDH17O14917 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
PCDH17O14917 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
PCDH17O14917 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
PCDH17O14917 AL031595.2-201ENST00000624215 19071 ntBASIC5.14□□□□□ -1.59
PCDH17O14917 AC083843.2-201ENST00000568248 6253 ntBASIC5.14□□□□□ -1.59
PCDH17O14917 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.14□□□□□ -1.59
PCDH17O14917 BX005019.1-201ENST00000561881 1810 ntBASIC5.14□□□□□ -1.59
PCDH17O14917 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
PCDH17O14917 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.14□□□□□ -1.59
PCDH17O14917 AL360270.2-201ENST00000562952 5985 ntBASIC5.14□□□□□ -1.59
PCDH17O14917 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
PCDH17O14917 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
PCDH17O14917 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
PCDH17O14917 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
PCDH17O14917 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
PCDH17O14917 NPM1P40-201ENST00000412758 733 ntBASIC5.14□□□□□ -1.59
PCDH17O14917 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC5.14□□□□□ -1.59
PCDH17O14917 ZDHHC20P2-201ENST00000424108 429 ntBASIC5.14□□□□□ -1.59
PCDH17O14917 AC093655.2-201ENST00000425735 631 ntBASIC5.14□□□□□ -1.59
PCDH17O14917 AL139148.1-201ENST00000427122 680 ntBASIC5.14□□□□□ -1.59
PCDH17O14917 RPL7P56-201ENST00000429441 717 ntBASIC5.14□□□□□ -1.59
PCDH17O14917 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC5.14□□□□□ -1.59
PCDH17O14917 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC5.14□□□□□ -1.59
PCDH17O14917 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC5.14□□□□□ -1.59
PCDH17O14917 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC5.14□□□□□ -1.59
PCDH17O14917 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC5.14□□□□□ -1.59
PCDH17O14917 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC5.14□□□□□ -1.59
PCDH17O14917 AC005532.2-201ENST00000467154 373 ntBASIC5.14□□□□□ -1.59
PCDH17O14917 RN7SL329P-201ENST00000467740 299 ntBASIC5.14□□□□□ -1.59
PCDH17O14917 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC5.14□□□□□ -1.59
PCDH17O14917 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC5.14□□□□□ -1.59
PCDH17O14917 AC021193.1-201ENST00000511607 420 ntBASIC5.14□□□□□ -1.59
PCDH17O14917 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.14□□□□□ -1.59
PCDH17O14917 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC5.14□□□□□ -1.59
PCDH17O14917 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.14□□□□□ -1.59
PCDH17O14917 HMGB1P40-201ENST00000525121 540 ntBASIC5.14□□□□□ -1.59
PCDH17O14917 UBTFL10-201ENST00000528532 562 ntBASIC5.14□□□□□ -1.59
PCDH17O14917 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.14□□□□□ -1.59
PCDH17O14917 BLZF2P-201ENST00000553776 1130 ntBASIC5.14□□□□□ -1.59
PCDH17O14917 AC023813.2-201ENST00000564321 469 ntBASIC5.14□□□□□ -1.59
PCDH17O14917 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC5.14□□□□□ -1.59
PCDH17O14917 AC005341.1-201ENST00000571086 708 ntBASIC5.14□□□□□ -1.59
PCDH17O14917 BPTFP1-201ENST00000579209 492 ntBASIC5.14□□□□□ -1.59
PCDH17O14917 MIR4666A-201ENST00000580160 79 ntBASIC5.14□□□□□ -1.59
PCDH17O14917 MIR7853-201ENST00000584820 132 ntBASIC5.14□□□□□ -1.59
PCDH17O14917 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC5.14□□□□□ -1.59
PCDH17O14917 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.14□□□□□ -1.59
PCDH17O14917 AC000068.2-201ENST00000608816 460 ntBASIC5.14□□□□□ -1.59
PCDH17O14917 AC004908.3-201ENST00000610248 625 ntBASIC5.14□□□□□ -1.59
PCDH17O14917 uc_338.7-201ENST00000621834 124 ntBASIC5.14□□□□□ -1.59
PCDH17O14917 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC5.14□□□□□ -1.59
PCDH17O14917 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC5.14□□□□□ -1.59
PCDH17O14917 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
PCDH17O14917 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
PCDH17O14917 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
PCDH17O14917 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
PCDH17O14917 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms