Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 LARS-212ENST00000510191 3737 ntTSL 2 BASIC7.15□□□□□ -1.27
TMEM88BA6NKF7 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC7.15□□□□□ -1.27
TMEM88BA6NKF7 LINC00598-215ENST00000638084 1974 ntTSL 5 BASIC7.15□□□□□ -1.27
TMEM88BA6NKF7 MEF2C-201ENST00000340208 6192 ntAPPRIS ALT1 TSL 1 (best) BASIC7.15□□□□□ -1.27
TMEM88BA6NKF7 CLASP2-225ENST00000635664 4176 ntTSL 5 BASIC7.15□□□□□ -1.27
TMEM88BA6NKF7 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
TMEM88BA6NKF7 MROH9-201ENST00000367758 2227 ntAPPRIS P3 TSL 1 (best) BASIC7.15□□□□□ -1.27
TMEM88BA6NKF7 ACACA-226ENST00000612895 9624 ntTSL 5 BASIC7.15□□□□□ -1.27
TMEM88BA6NKF7 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC7.15□□□□□ -1.27
TMEM88BA6NKF7 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC7.15□□□□□ -1.27
TMEM88BA6NKF7 CTNND1-218ENST00000528232 5745 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
TMEM88BA6NKF7 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
TMEM88BA6NKF7 CNTNAP4-206ENST00000478060 3708 ntTSL 5 BASIC7.14□□□□□ -1.27
TMEM88BA6NKF7 RNF217-AS1-201ENST00000439075 4507 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
TMEM88BA6NKF7 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC7.14□□□□□ -1.27
TMEM88BA6NKF7 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC7.14□□□□□ -1.27
TMEM88BA6NKF7 SENP1-201ENST00000448372 4679 ntAPPRIS P2 TSL 1 (best) BASIC7.14□□□□□ -1.27
TMEM88BA6NKF7 GREM1-203ENST00000622074 14606 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
TMEM88BA6NKF7 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
TMEM88BA6NKF7 FBXW7-203ENST00000296555 3572 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
TMEM88BA6NKF7 PTPRR-202ENST00000342084 2037 ntAPPRIS ALT2 TSL 2 BASIC7.14□□□□□ -1.27
TMEM88BA6NKF7 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
TMEM88BA6NKF7 RNA5SP375-201ENST00000362975 119 ntBASIC7.14□□□□□ -1.27
TMEM88BA6NKF7 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
TMEM88BA6NKF7 U8.14-201ENST00000390843 143 ntBASIC7.14□□□□□ -1.27
TMEM88BA6NKF7 AC009804.1-201ENST00000400949 179 ntBASIC7.14□□□□□ -1.27
TMEM88BA6NKF7 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC7.14□□□□□ -1.27
TMEM88BA6NKF7 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC7.14□□□□□ -1.27
TMEM88BA6NKF7 OR8F1P-201ENST00000425243 930 ntBASIC7.14□□□□□ -1.27
TMEM88BA6NKF7 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC7.14□□□□□ -1.27
TMEM88BA6NKF7 AL390119.1-201ENST00000440329 312 ntBASIC7.14□□□□□ -1.27
TMEM88BA6NKF7 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
TMEM88BA6NKF7 AC103563.5-201ENST00000455643 364 ntBASIC7.14□□□□□ -1.27
TMEM88BA6NKF7 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC7.14□□□□□ -1.27
TMEM88BA6NKF7 UBA52P3-201ENST00000491303 382 ntBASIC7.14□□□□□ -1.27
TMEM88BA6NKF7 RPL9P6-201ENST00000492764 598 ntBASIC7.14□□□□□ -1.27
TMEM88BA6NKF7 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC7.14□□□□□ -1.27
TMEM88BA6NKF7 AC108475.1-201ENST00000507880 950 ntBASIC7.14□□□□□ -1.27
TMEM88BA6NKF7 AF131216.2-201ENST00000512316 564 ntBASIC7.14□□□□□ -1.27
TMEM88BA6NKF7 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC7.14□□□□□ -1.27
TMEM88BA6NKF7 RNU6-718P-201ENST00000516166 105 ntBASIC7.14□□□□□ -1.27
TMEM88BA6NKF7 RNU6-150P-201ENST00000516237 95 ntBASIC7.14□□□□□ -1.27
TMEM88BA6NKF7 IGLVVI-25-1-201ENST00000521893 249 ntBASIC7.14□□□□□ -1.27
TMEM88BA6NKF7 AP004247.1-201ENST00000531556 1289 ntBASIC7.14□□□□□ -1.27
TMEM88BA6NKF7 AC118273.2-201ENST00000532092 465 ntBASIC7.14□□□□□ -1.27
TMEM88BA6NKF7 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
TMEM88BA6NKF7 AC090502.2-201ENST00000549267 280 ntBASIC7.14□□□□□ -1.27
TMEM88BA6NKF7 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC7.14□□□□□ -1.27
TMEM88BA6NKF7 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC7.14□□□□□ -1.27
TMEM88BA6NKF7 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC7.14□□□□□ -1.27
TMEM88BA6NKF7 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC7.14□□□□□ -1.27
TMEM88BA6NKF7 SORBS1-219ENST00000607232 4374 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
TMEM88BA6NKF7 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC7.14□□□□□ -1.27
TMEM88BA6NKF7 AC008250.2-201ENST00000615261 205 ntBASIC7.14□□□□□ -1.27
TMEM88BA6NKF7 AP001506.1-201ENST00000615444 211 ntBASIC7.14□□□□□ -1.27
TMEM88BA6NKF7 AC072046.2-201ENST00000618366 268 ntBASIC7.14□□□□□ -1.27
TMEM88BA6NKF7 FLJ42393-201ENST00000623801 2270 ntBASIC7.14□□□□□ -1.27
TMEM88BA6NKF7 AC116563.2-201ENST00000624751 535 ntBASIC7.14□□□□□ -1.27
TMEM88BA6NKF7 CR392039.4-201ENST00000624968 501 ntBASIC7.14□□□□□ -1.27
TMEM88BA6NKF7 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC7.14□□□□□ -1.27
TMEM88BA6NKF7 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
TMEM88BA6NKF7 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
TMEM88BA6NKF7 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
TMEM88BA6NKF7 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
TMEM88BA6NKF7 FZD3-204ENST00000537916 13740 ntAPPRIS P1 TSL 2 BASIC7.14□□□□□ -1.27
TMEM88BA6NKF7 TRRAP-202ENST00000359863 12677 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
TMEM88BA6NKF7 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC7.13□□□□□ -1.27
TMEM88BA6NKF7 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC7.13□□□□□ -1.27
TMEM88BA6NKF7 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC7.13□□□□□ -1.27
TMEM88BA6NKF7 SELE-204ENST00000367776 3576 ntTSL 5 BASIC7.13□□□□□ -1.27
TMEM88BA6NKF7 SELE-205ENST00000367777 3576 ntTSL 5 BASIC7.13□□□□□ -1.27
TMEM88BA6NKF7 KLHL7-203ENST00000409689 3231 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
TMEM88BA6NKF7 PPP2R5C-205ENST00000445439 1526 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
TMEM88BA6NKF7 PHACTR2P1-201ENST00000605639 1414 ntBASIC7.13□□□□□ -1.27
TMEM88BA6NKF7 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
TMEM88BA6NKF7 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
TMEM88BA6NKF7 RN7SKP226-201ENST00000364912 300 ntBASIC7.13□□□□□ -1.27
TMEM88BA6NKF7 MIR141-201ENST00000384975 95 ntBASIC7.13□□□□□ -1.27
TMEM88BA6NKF7 MIR320C1-201ENST00000408566 88 ntBASIC7.13□□□□□ -1.27
TMEM88BA6NKF7 RN7SKP285-201ENST00000410137 318 ntBASIC7.13□□□□□ -1.27
TMEM88BA6NKF7 FAR2P2-201ENST00000413041 594 ntBASIC7.13□□□□□ -1.27
TMEM88BA6NKF7 RPL35AP24-201ENST00000413846 330 ntBASIC7.13□□□□□ -1.27
TMEM88BA6NKF7 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC7.13□□□□□ -1.27
TMEM88BA6NKF7 AC008753.1-201ENST00000423096 284 ntBASIC7.13□□□□□ -1.27
TMEM88BA6NKF7 FAR2P4-202ENST00000425399 584 ntBASIC7.13□□□□□ -1.27
TMEM88BA6NKF7 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC7.13□□□□□ -1.27
TMEM88BA6NKF7 GAPDHP23-201ENST00000444823 993 ntBASIC7.13□□□□□ -1.27
TMEM88BA6NKF7 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC7.13□□□□□ -1.27
TMEM88BA6NKF7 Z80107.2-201ENST00000445127 392 ntBASIC7.13□□□□□ -1.27
TMEM88BA6NKF7 DEFA11P-201ENST00000446470 261 ntBASIC7.13□□□□□ -1.27
TMEM88BA6NKF7 AC003071.1-201ENST00000451219 789 ntBASIC7.13□□□□□ -1.27
TMEM88BA6NKF7 AC009220.1-201ENST00000451614 275 ntBASIC7.13□□□□□ -1.27
TMEM88BA6NKF7 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC7.13□□□□□ -1.27
TMEM88BA6NKF7 NDUFAF4P3-201ENST00000456468 525 ntBASIC7.13□□□□□ -1.27
TMEM88BA6NKF7 RPS23P6-201ENST00000466136 431 ntBASIC7.13□□□□□ -1.27
TMEM88BA6NKF7 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC7.13□□□□□ -1.27
TMEM88BA6NKF7 AC017015.1-201ENST00000477387 286 ntBASIC7.13□□□□□ -1.27
TMEM88BA6NKF7 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC7.13□□□□□ -1.27
TMEM88BA6NKF7 AC078788.1-201ENST00000498457 634 ntTSL 3 BASIC7.13□□□□□ -1.27
TMEM88BA6NKF7 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC7.13□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 147.2 ms