Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 RNU1-77P-201ENST00000390868 162 ntBASIC6.09□□□□□ -1.43
COL4A3BPQ9Y5P4 RNU6ATAC18P-201ENST00000408413 101 ntBASIC6.09□□□□□ -1.43
COL4A3BPQ9Y5P4 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC6.09□□□□□ -1.43
COL4A3BPQ9Y5P4 AL354766.1-201ENST00000423396 542 ntBASIC6.09□□□□□ -1.43
COL4A3BPQ9Y5P4 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC6.09□□□□□ -1.43
COL4A3BPQ9Y5P4 AC023347.2-201ENST00000433994 462 ntBASIC6.09□□□□□ -1.43
COL4A3BPQ9Y5P4 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC6.09□□□□□ -1.43
COL4A3BPQ9Y5P4 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC6.09□□□□□ -1.43
COL4A3BPQ9Y5P4 RPL7P59-201ENST00000447700 943 ntBASIC6.09□□□□□ -1.43
COL4A3BPQ9Y5P4 AL591623.2-201ENST00000449978 222 ntBASIC6.09□□□□□ -1.43
COL4A3BPQ9Y5P4 AC011979.1-201ENST00000472300 483 ntBASIC6.09□□□□□ -1.43
COL4A3BPQ9Y5P4 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC6.09□□□□□ -1.43
COL4A3BPQ9Y5P4 OR2AO1P-201ENST00000476497 403 ntBASIC6.09□□□□□ -1.43
COL4A3BPQ9Y5P4 AC126121.1-201ENST00000482313 553 ntBASIC6.09□□□□□ -1.43
COL4A3BPQ9Y5P4 RPL30P11-201ENST00000495304 339 ntBASIC6.09□□□□□ -1.43
COL4A3BPQ9Y5P4 AC093815.1-201ENST00000508637 280 ntBASIC6.09□□□□□ -1.43
COL4A3BPQ9Y5P4 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC6.09□□□□□ -1.43
COL4A3BPQ9Y5P4 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC6.09□□□□□ -1.43
COL4A3BPQ9Y5P4 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC6.09□□□□□ -1.43
COL4A3BPQ9Y5P4 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC6.09□□□□□ -1.43
COL4A3BPQ9Y5P4 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
COL4A3BPQ9Y5P4 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC6.09□□□□□ -1.43
COL4A3BPQ9Y5P4 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC6.09□□□□□ -1.43
COL4A3BPQ9Y5P4 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC6.09□□□□□ -1.43
COL4A3BPQ9Y5P4 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC6.09□□□□□ -1.43
COL4A3BPQ9Y5P4 MIR4716-201ENST00000579628 84 ntBASIC6.09□□□□□ -1.43
COL4A3BPQ9Y5P4 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC6.09□□□□□ -1.43
COL4A3BPQ9Y5P4 AC022069.1-201ENST00000582910 658 ntBASIC6.09□□□□□ -1.43
COL4A3BPQ9Y5P4 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC6.09□□□□□ -1.43
COL4A3BPQ9Y5P4 XIST-210ENST00000602863 775 ntTSL 3 BASIC6.09□□□□□ -1.43
COL4A3BPQ9Y5P4 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC6.09□□□□□ -1.43
COL4A3BPQ9Y5P4 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC6.09□□□□□ -1.43
COL4A3BPQ9Y5P4 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC6.09□□□□□ -1.43
COL4A3BPQ9Y5P4 uc_338.7-201ENST00000621834 124 ntBASIC6.09□□□□□ -1.43
COL4A3BPQ9Y5P4 METTL15-211ENST00000634762 718 ntTSL 5 BASIC6.09□□□□□ -1.43
COL4A3BPQ9Y5P4 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
COL4A3BPQ9Y5P4 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
COL4A3BPQ9Y5P4 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
COL4A3BPQ9Y5P4 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC6.09□□□□□ -1.43
COL4A3BPQ9Y5P4 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
COL4A3BPQ9Y5P4 ECM1P2-201ENST00000503354 1577 ntBASIC6.09□□□□□ -1.43
COL4A3BPQ9Y5P4 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
COL4A3BPQ9Y5P4 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
COL4A3BPQ9Y5P4 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
COL4A3BPQ9Y5P4 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.44
COL4A3BPQ9Y5P4 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC6.09□□□□□ -1.44
COL4A3BPQ9Y5P4 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.44
COL4A3BPQ9Y5P4 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
COL4A3BPQ9Y5P4 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
COL4A3BPQ9Y5P4 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC6.08□□□□□ -1.44
COL4A3BPQ9Y5P4 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
COL4A3BPQ9Y5P4 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
COL4A3BPQ9Y5P4 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC6.08□□□□□ -1.44
COL4A3BPQ9Y5P4 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
COL4A3BPQ9Y5P4 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
COL4A3BPQ9Y5P4 SNORD56.6-201ENST00000384569 71 ntBASIC6.08□□□□□ -1.44
COL4A3BPQ9Y5P4 AL590084.1-201ENST00000407885 387 ntBASIC6.08□□□□□ -1.44
COL4A3BPQ9Y5P4 RN7SKP278-201ENST00000410504 342 ntBASIC6.08□□□□□ -1.44
COL4A3BPQ9Y5P4 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC6.08□□□□□ -1.44
COL4A3BPQ9Y5P4 RPL35AP24-201ENST00000413846 330 ntBASIC6.08□□□□□ -1.44
COL4A3BPQ9Y5P4 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC6.08□□□□□ -1.44
COL4A3BPQ9Y5P4 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC6.08□□□□□ -1.44
COL4A3BPQ9Y5P4 GTF2IP23-201ENST00000423746 351 ntBASIC6.08□□□□□ -1.44
COL4A3BPQ9Y5P4 AC009784.1-201ENST00000426484 460 ntBASIC6.08□□□□□ -1.44
COL4A3BPQ9Y5P4 AC007559.1-201ENST00000428736 355 ntBASIC6.08□□□□□ -1.44
COL4A3BPQ9Y5P4 USP9YP31-201ENST00000431405 881 ntBASIC6.08□□□□□ -1.44
COL4A3BPQ9Y5P4 CYCSP6-201ENST00000434498 302 ntBASIC6.08□□□□□ -1.44
COL4A3BPQ9Y5P4 RPS20P1-201ENST00000434853 354 ntBASIC6.08□□□□□ -1.44
COL4A3BPQ9Y5P4 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC6.08□□□□□ -1.44
COL4A3BPQ9Y5P4 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC6.08□□□□□ -1.44
COL4A3BPQ9Y5P4 AL034418.1-201ENST00000448675 860 ntBASIC6.08□□□□□ -1.44
COL4A3BPQ9Y5P4 AURKAPS1-201ENST00000451805 1212 ntBASIC6.08□□□□□ -1.44
COL4A3BPQ9Y5P4 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC6.08□□□□□ -1.44
COL4A3BPQ9Y5P4 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC6.08□□□□□ -1.44
COL4A3BPQ9Y5P4 ENSA-211ENST00000503345 793 ntTSL 3 BASIC6.08□□□□□ -1.44
COL4A3BPQ9Y5P4 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC6.08□□□□□ -1.44
COL4A3BPQ9Y5P4 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC6.08□□□□□ -1.44
COL4A3BPQ9Y5P4 AC091912.1-201ENST00000511351 248 ntBASIC6.08□□□□□ -1.44
COL4A3BPQ9Y5P4 AC109471.1-201ENST00000511631 612 ntBASIC6.08□□□□□ -1.44
COL4A3BPQ9Y5P4 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC6.08□□□□□ -1.44
COL4A3BPQ9Y5P4 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC6.08□□□□□ -1.44
COL4A3BPQ9Y5P4 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC6.08□□□□□ -1.44
COL4A3BPQ9Y5P4 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
COL4A3BPQ9Y5P4 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC6.08□□□□□ -1.44
COL4A3BPQ9Y5P4 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC6.08□□□□□ -1.44
COL4A3BPQ9Y5P4 AP005403.1-201ENST00000579720 229 ntBASIC6.08□□□□□ -1.44
COL4A3BPQ9Y5P4 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC6.08□□□□□ -1.44
COL4A3BPQ9Y5P4 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC6.08□□□□□ -1.44
COL4A3BPQ9Y5P4 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC6.08□□□□□ -1.44
COL4A3BPQ9Y5P4 AL390838.2-201ENST00000602394 274 ntBASIC6.08□□□□□ -1.44
COL4A3BPQ9Y5P4 AC091057.2-201ENST00000602594 792 ntBASIC6.08□□□□□ -1.44
COL4A3BPQ9Y5P4 GAS5-AS1-201ENST00000602767 694 ntBASIC6.08□□□□□ -1.44
COL4A3BPQ9Y5P4 MRPS35P3-201ENST00000603189 709 ntBASIC6.08□□□□□ -1.44
COL4A3BPQ9Y5P4 AC093765.1-201ENST00000603758 881 ntBASIC6.08□□□□□ -1.44
COL4A3BPQ9Y5P4 CCL14-204ENST00000622526 472 ntTSL 3 BASIC6.08□□□□□ -1.44
COL4A3BPQ9Y5P4 AC136428.4-201ENST00000634254 1155 ntBASIC6.08□□□□□ -1.44
COL4A3BPQ9Y5P4 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
COL4A3BPQ9Y5P4 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
COL4A3BPQ9Y5P4 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
COL4A3BPQ9Y5P4 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms