Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 MGP-201ENST00000228938 694 ntTSL 3 BASIC4.15□□□□□ -1.75
TRAPPC4Q9Y296 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC4.15□□□□□ -1.75
TRAPPC4Q9Y296 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
TRAPPC4Q9Y296 RNA5SP397-201ENST00000391323 118 ntBASIC4.15□□□□□ -1.75
TRAPPC4Q9Y296 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
TRAPPC4Q9Y296 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
TRAPPC4Q9Y296 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
TRAPPC4Q9Y296 RPL21P43-201ENST00000425440 472 ntBASIC4.15□□□□□ -1.75
TRAPPC4Q9Y296 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC4.15□□□□□ -1.75
TRAPPC4Q9Y296 YWHAEP5-201ENST00000431545 765 ntBASIC4.15□□□□□ -1.75
TRAPPC4Q9Y296 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.15□□□□□ -1.75
TRAPPC4Q9Y296 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC4.15□□□□□ -1.75
TRAPPC4Q9Y296 RPS27AP15-201ENST00000447672 466 ntBASIC4.15□□□□□ -1.75
TRAPPC4Q9Y296 AL162591.2-201ENST00000449634 317 ntBASIC4.15□□□□□ -1.75
TRAPPC4Q9Y296 AL513533.1-201ENST00000453728 415 ntBASIC4.15□□□□□ -1.75
TRAPPC4Q9Y296 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC4.15□□□□□ -1.75
TRAPPC4Q9Y296 RPL35AP28-201ENST00000459730 331 ntBASIC4.15□□□□□ -1.75
TRAPPC4Q9Y296 AC139783.2-201ENST00000504847 1145 ntBASIC4.15□□□□□ -1.75
TRAPPC4Q9Y296 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.15□□□□□ -1.75
TRAPPC4Q9Y296 RNU6-751P-201ENST00000516382 101 ntBASIC4.15□□□□□ -1.75
TRAPPC4Q9Y296 OR5M7P-201ENST00000526140 972 ntBASIC4.15□□□□□ -1.75
TRAPPC4Q9Y296 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.15□□□□□ -1.75
TRAPPC4Q9Y296 AP001804.2-201ENST00000533932 910 ntBASIC4.15□□□□□ -1.75
TRAPPC4Q9Y296 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.15□□□□□ -1.75
TRAPPC4Q9Y296 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
TRAPPC4Q9Y296 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.15□□□□□ -1.75
TRAPPC4Q9Y296 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
TRAPPC4Q9Y296 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.15□□□□□ -1.75
TRAPPC4Q9Y296 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC4.15□□□□□ -1.75
TRAPPC4Q9Y296 MIR4443-201ENST00000585052 53 ntBASIC4.15□□□□□ -1.75
TRAPPC4Q9Y296 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.15□□□□□ -1.75
TRAPPC4Q9Y296 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
TRAPPC4Q9Y296 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.15□□□□□ -1.75
TRAPPC4Q9Y296 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.75
TRAPPC4Q9Y296 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.15□□□□□ -1.75
TRAPPC4Q9Y296 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
TRAPPC4Q9Y296 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
TRAPPC4Q9Y296 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.75
TRAPPC4Q9Y296 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.14□□□□□ -1.75
TRAPPC4Q9Y296 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.14□□□□□ -1.75
TRAPPC4Q9Y296 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.14□□□□□ -1.75
TRAPPC4Q9Y296 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
TRAPPC4Q9Y296 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
TRAPPC4Q9Y296 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
TRAPPC4Q9Y296 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
TRAPPC4Q9Y296 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
TRAPPC4Q9Y296 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
TRAPPC4Q9Y296 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.14□□□□□ -1.75
TRAPPC4Q9Y296 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
TRAPPC4Q9Y296 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.14□□□□□ -1.75
TRAPPC4Q9Y296 AC067945.1-201ENST00000342609 618 ntBASIC4.14□□□□□ -1.75
TRAPPC4Q9Y296 RNU4-23P-201ENST00000362839 140 ntBASIC4.14□□□□□ -1.75
TRAPPC4Q9Y296 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC4.14□□□□□ -1.75
TRAPPC4Q9Y296 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC4.14□□□□□ -1.75
TRAPPC4Q9Y296 RAB9AP4-201ENST00000415230 609 ntBASIC4.14□□□□□ -1.75
TRAPPC4Q9Y296 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC4.14□□□□□ -1.75
TRAPPC4Q9Y296 RCC2P2-201ENST00000422174 918 ntBASIC4.14□□□□□ -1.75
TRAPPC4Q9Y296 MTCO1P51-201ENST00000427672 1060 ntBASIC4.14□□□□□ -1.75
TRAPPC4Q9Y296 RPL21P91-201ENST00000429231 479 ntBASIC4.14□□□□□ -1.75
TRAPPC4Q9Y296 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC4.14□□□□□ -1.75
TRAPPC4Q9Y296 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.14□□□□□ -1.75
TRAPPC4Q9Y296 RPL36AP15-201ENST00000444514 266 ntBASIC4.14□□□□□ -1.75
TRAPPC4Q9Y296 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC4.14□□□□□ -1.75
TRAPPC4Q9Y296 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.14□□□□□ -1.75
TRAPPC4Q9Y296 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.14□□□□□ -1.75
TRAPPC4Q9Y296 RPS26P15-201ENST00000488067 348 ntBASIC4.14□□□□□ -1.75
TRAPPC4Q9Y296 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC4.14□□□□□ -1.75
TRAPPC4Q9Y296 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.14□□□□□ -1.75
TRAPPC4Q9Y296 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC4.14□□□□□ -1.75
TRAPPC4Q9Y296 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.14□□□□□ -1.75
TRAPPC4Q9Y296 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.14□□□□□ -1.75
TRAPPC4Q9Y296 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
TRAPPC4Q9Y296 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.14□□□□□ -1.75
TRAPPC4Q9Y296 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.14□□□□□ -1.75
TRAPPC4Q9Y296 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC4.14□□□□□ -1.75
TRAPPC4Q9Y296 BNIP3P32-201ENST00000600015 554 ntBASIC4.14□□□□□ -1.75
TRAPPC4Q9Y296 AC073091.2-201ENST00000603205 907 ntBASIC4.14□□□□□ -1.75
TRAPPC4Q9Y296 AL133338.2-201ENST00000604292 736 ntBASIC4.14□□□□□ -1.75
TRAPPC4Q9Y296 BNIP3P7-201ENST00000605641 516 ntBASIC4.14□□□□□ -1.75
TRAPPC4Q9Y296 AC008966.2-201ENST00000606157 453 ntBASIC4.14□□□□□ -1.75
TRAPPC4Q9Y296 AL161616.1-201ENST00000611867 286 ntBASIC4.14□□□□□ -1.75
TRAPPC4Q9Y296 AC026368.1-201ENST00000614934 690 ntBASIC4.14□□□□□ -1.75
TRAPPC4Q9Y296 AL391597.1-201ENST00000618707 694 ntBASIC4.14□□□□□ -1.75
TRAPPC4Q9Y296 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.14□□□□□ -1.75
TRAPPC4Q9Y296 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
TRAPPC4Q9Y296 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.14□□□□□ -1.75
TRAPPC4Q9Y296 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.14□□□□□ -1.75
TRAPPC4Q9Y296 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
TRAPPC4Q9Y296 AC018529.3-201ENST00000624212 2254 ntBASIC4.14□□□□□ -1.75
TRAPPC4Q9Y296 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
TRAPPC4Q9Y296 HSPA8P17-201ENST00000427029 1382 ntBASIC4.14□□□□□ -1.75
TRAPPC4Q9Y296 AL133243.3-201ENST00000617415 3004 ntBASIC4.13□□□□□ -1.75
TRAPPC4Q9Y296 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
TRAPPC4Q9Y296 AC010928.1-201ENST00000592477 1447 ntBASIC4.13□□□□□ -1.75
TRAPPC4Q9Y296 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.13□□□□□ -1.75
TRAPPC4Q9Y296 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.13□□□□□ -1.75
TRAPPC4Q9Y296 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
TRAPPC4Q9Y296 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.13□□□□□ -1.75
TRAPPC4Q9Y296 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
TRAPPC4Q9Y296 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms