Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 AC243960.4-201ENST00000600532 288 ntBASIC8.21□□□□□ -1.1
PDZRN3Q9UPQ7 MEMO1P5-201ENST00000604810 406 ntBASIC8.21□□□□□ -1.1
PDZRN3Q9UPQ7 AC004853.1-201ENST00000604902 698 ntBASIC8.21□□□□□ -1.1
PDZRN3Q9UPQ7 CTHRC1P1-201ENST00000605383 469 ntBASIC8.21□□□□□ -1.1
PDZRN3Q9UPQ7 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC8.21□□□□□ -1.1
PDZRN3Q9UPQ7 C2orf27A-204ENST00000623058 969 ntBASIC8.21□□□□□ -1.1
PDZRN3Q9UPQ7 AL118496.1-201ENST00000440201 1812 ntBASIC8.21□□□□□ -1.1
PDZRN3Q9UPQ7 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.1
PDZRN3Q9UPQ7 AL034370.1-201ENST00000397254 1590 ntBASIC8.21□□□□□ -1.1
PDZRN3Q9UPQ7 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
PDZRN3Q9UPQ7 YES1-203ENST00000577961 4554 ntTSL 5 BASIC8.21□□□□□ -1.1
PDZRN3Q9UPQ7 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC8.21□□□□□ -1.1
PDZRN3Q9UPQ7 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC8.21□□□□□ -1.1
PDZRN3Q9UPQ7 WBP11P1-201ENST00000562560 1931 ntBASIC8.21□□□□□ -1.1
PDZRN3Q9UPQ7 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC8.21□□□□□ -1.1
PDZRN3Q9UPQ7 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
PDZRN3Q9UPQ7 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
PDZRN3Q9UPQ7 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
PDZRN3Q9UPQ7 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
PDZRN3Q9UPQ7 AC110373.1-201ENST00000505994 3505 ntBASIC8.2□□□□□ -1.1
PDZRN3Q9UPQ7 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC8.2□□□□□ -1.1
PDZRN3Q9UPQ7 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
PDZRN3Q9UPQ7 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC8.2□□□□□ -1.1
PDZRN3Q9UPQ7 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
PDZRN3Q9UPQ7 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC8.2□□□□□ -1.1
PDZRN3Q9UPQ7 AC103591.2-201ENST00000265259 766 ntBASIC8.2□□□□□ -1.1
PDZRN3Q9UPQ7 Y_RNA.18-201ENST00000362461 102 ntBASIC8.2□□□□□ -1.1
PDZRN3Q9UPQ7 SNORA63.7-201ENST00000365579 123 ntBASIC8.2□□□□□ -1.1
PDZRN3Q9UPQ7 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC8.2□□□□□ -1.1
PDZRN3Q9UPQ7 DEFB109C-201ENST00000382575 264 ntBASIC8.2□□□□□ -1.1
PDZRN3Q9UPQ7 DEFB109B-201ENST00000382656 264 ntBASIC8.2□□□□□ -1.1
PDZRN3Q9UPQ7 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
PDZRN3Q9UPQ7 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
PDZRN3Q9UPQ7 OR7E101P-201ENST00000400428 513 ntBASIC8.2□□□□□ -1.1
PDZRN3Q9UPQ7 OFD1P1Y-201ENST00000411756 1225 ntBASIC8.2□□□□□ -1.1
PDZRN3Q9UPQ7 RPL23AP39-201ENST00000415533 405 ntBASIC8.2□□□□□ -1.1
PDZRN3Q9UPQ7 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC8.2□□□□□ -1.1
PDZRN3Q9UPQ7 Z68868.1-201ENST00000429048 544 ntBASIC8.2□□□□□ -1.1
PDZRN3Q9UPQ7 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
PDZRN3Q9UPQ7 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC8.2□□□□□ -1.1
PDZRN3Q9UPQ7 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC8.2□□□□□ -1.1
PDZRN3Q9UPQ7 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
PDZRN3Q9UPQ7 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC8.2□□□□□ -1.1
PDZRN3Q9UPQ7 RN7SL101P-201ENST00000496350 279 ntBASIC8.2□□□□□ -1.1
PDZRN3Q9UPQ7 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC8.2□□□□□ -1.1
PDZRN3Q9UPQ7 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC8.2□□□□□ -1.1
PDZRN3Q9UPQ7 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC8.2□□□□□ -1.1
PDZRN3Q9UPQ7 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
PDZRN3Q9UPQ7 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC8.2□□□□□ -1.1
PDZRN3Q9UPQ7 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC8.2□□□□□ -1.1
PDZRN3Q9UPQ7 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC8.2□□□□□ -1.1
PDZRN3Q9UPQ7 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC8.2□□□□□ -1.1
PDZRN3Q9UPQ7 RN7SL208P-201ENST00000577964 296 ntBASIC8.2□□□□□ -1.1
PDZRN3Q9UPQ7 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC8.2□□□□□ -1.1
PDZRN3Q9UPQ7 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC8.2□□□□□ -1.1
PDZRN3Q9UPQ7 AC008507.3-201ENST00000585753 472 ntBASIC8.2□□□□□ -1.1
PDZRN3Q9UPQ7 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC8.2□□□□□ -1.1
PDZRN3Q9UPQ7 GLYATL1P2-202ENST00000588046 902 ntBASIC8.2□□□□□ -1.1
PDZRN3Q9UPQ7 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC8.2□□□□□ -1.1
PDZRN3Q9UPQ7 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC8.2□□□□□ -1.1
PDZRN3Q9UPQ7 RFPL4AP6-201ENST00000616792 846 ntBASIC8.2□□□□□ -1.1
PDZRN3Q9UPQ7 AC091925.1-201ENST00000623204 462 ntBASIC8.2□□□□□ -1.1
PDZRN3Q9UPQ7 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC8.2□□□□□ -1.1
PDZRN3Q9UPQ7 AC073488.9-201ENST00000631601 754 ntBASIC8.2□□□□□ -1.1
PDZRN3Q9UPQ7 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC8.2□□□□□ -1.1
PDZRN3Q9UPQ7 POLA1-202ENST00000379068 5486 ntAPPRIS ALT2 TSL 5 BASIC8.2□□□□□ -1.1
PDZRN3Q9UPQ7 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
PDZRN3Q9UPQ7 AC010401.2-201ENST00000575137 4934 ntBASIC8.2□□□□□ -1.1
PDZRN3Q9UPQ7 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC8.2□□□□□ -1.1
PDZRN3Q9UPQ7 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC8.2□□□□□ -1.1
PDZRN3Q9UPQ7 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
PDZRN3Q9UPQ7 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
PDZRN3Q9UPQ7 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
PDZRN3Q9UPQ7 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC8.2□□□□□ -1.1
PDZRN3Q9UPQ7 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
PDZRN3Q9UPQ7 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC8.19□□□□□ -1.1
PDZRN3Q9UPQ7 AL157831.2-201ENST00000564681 3095 ntBASIC8.19□□□□□ -1.1
PDZRN3Q9UPQ7 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC8.19□□□□□ -1.1
PDZRN3Q9UPQ7 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
PDZRN3Q9UPQ7 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
PDZRN3Q9UPQ7 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC8.19□□□□□ -1.1
PDZRN3Q9UPQ7 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC8.19□□□□□ -1.1
PDZRN3Q9UPQ7 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC8.19□□□□□ -1.1
PDZRN3Q9UPQ7 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC8.19□□□□□ -1.1
PDZRN3Q9UPQ7 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC8.19□□□□□ -1.1
PDZRN3Q9UPQ7 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC8.19□□□□□ -1.1
PDZRN3Q9UPQ7 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC8.19□□□□□ -1.1
PDZRN3Q9UPQ7 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
PDZRN3Q9UPQ7 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
PDZRN3Q9UPQ7 FAM32BP-201ENST00000344033 333 ntBASIC8.19□□□□□ -1.1
PDZRN3Q9UPQ7 MIR369-201ENST00000362155 70 ntBASIC8.19□□□□□ -1.1
PDZRN3Q9UPQ7 Y_RNA.296-201ENST00000364930 108 ntBASIC8.19□□□□□ -1.1
PDZRN3Q9UPQ7 RNU6-483P-201ENST00000384088 108 ntBASIC8.19□□□□□ -1.1
PDZRN3Q9UPQ7 Y_RNA.474-201ENST00000384341 102 ntBASIC8.19□□□□□ -1.1
PDZRN3Q9UPQ7 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
PDZRN3Q9UPQ7 AL023284.3-201ENST00000407767 334 ntBASIC8.19□□□□□ -1.1
PDZRN3Q9UPQ7 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
PDZRN3Q9UPQ7 AC245054.2-201ENST00000415639 319 ntBASIC8.19□□□□□ -1.1
PDZRN3Q9UPQ7 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC8.19□□□□□ -1.1
PDZRN3Q9UPQ7 AC092170.1-201ENST00000440211 356 ntBASIC8.19□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms