Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 AC105137.1-201ENST00000484355 562 ntBASIC4.76□□□□□ -1.65
NXF3Q9H4D5 AC108475.1-201ENST00000507880 950 ntBASIC4.76□□□□□ -1.65
NXF3Q9H4D5 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.76□□□□□ -1.65
NXF3Q9H4D5 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.76□□□□□ -1.65
NXF3Q9H4D5 OR5BC1P-201ENST00000529327 739 ntBASIC4.76□□□□□ -1.65
NXF3Q9H4D5 TOMM20P2-201ENST00000540082 421 ntBASIC4.76□□□□□ -1.65
NXF3Q9H4D5 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC4.76□□□□□ -1.65
NXF3Q9H4D5 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC4.76□□□□□ -1.65
NXF3Q9H4D5 AC021483.2-201ENST00000567415 758 ntBASIC4.76□□□□□ -1.65
NXF3Q9H4D5 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC4.76□□□□□ -1.65
NXF3Q9H4D5 AC124856.1-201ENST00000600819 896 ntBASIC4.76□□□□□ -1.65
NXF3Q9H4D5 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
NXF3Q9H4D5 AL354984.3-201ENST00000604803 325 ntBASIC4.76□□□□□ -1.65
NXF3Q9H4D5 AL160290.3-201ENST00000604869 165 ntBASIC4.76□□□□□ -1.65
NXF3Q9H4D5 AP002360.3-201ENST00000607673 710 ntBASIC4.76□□□□□ -1.65
NXF3Q9H4D5 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
NXF3Q9H4D5 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.76□□□□□ -1.65
NXF3Q9H4D5 MIR3653-201ENST00000625572 110 ntBASIC4.76□□□□□ -1.65
NXF3Q9H4D5 AC068724.3-201ENST00000625906 87 ntBASIC4.76□□□□□ -1.65
NXF3Q9H4D5 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.76□□□□□ -1.65
NXF3Q9H4D5 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.76□□□□□ -1.65
NXF3Q9H4D5 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
NXF3Q9H4D5 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.75□□□□□ -1.65
NXF3Q9H4D5 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
NXF3Q9H4D5 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
NXF3Q9H4D5 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
NXF3Q9H4D5 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
NXF3Q9H4D5 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
NXF3Q9H4D5 MAPK10-320ENST00000641462 6696 ntBASIC4.75□□□□□ -1.65
NXF3Q9H4D5 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
NXF3Q9H4D5 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.75□□□□□ -1.65
NXF3Q9H4D5 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.75□□□□□ -1.65
NXF3Q9H4D5 AL133268.1-201ENST00000405676 1401 ntBASIC4.75□□□□□ -1.65
NXF3Q9H4D5 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
NXF3Q9H4D5 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC4.75□□□□□ -1.65
NXF3Q9H4D5 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
NXF3Q9H4D5 AC097374.1-203ENST00000400783 485 ntBASIC4.75□□□□□ -1.65
NXF3Q9H4D5 RN7SKP97-201ENST00000410966 333 ntBASIC4.75□□□□□ -1.65
NXF3Q9H4D5 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.75□□□□□ -1.65
NXF3Q9H4D5 MFSD13B-201ENST00000420133 1290 ntBASIC4.75□□□□□ -1.65
NXF3Q9H4D5 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC4.75□□□□□ -1.65
NXF3Q9H4D5 RPS26P2-201ENST00000440331 348 ntBASIC4.75□□□□□ -1.65
NXF3Q9H4D5 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC4.75□□□□□ -1.65
NXF3Q9H4D5 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.75□□□□□ -1.65
NXF3Q9H4D5 ATP1B1P1-201ENST00000509767 915 ntBASIC4.75□□□□□ -1.65
NXF3Q9H4D5 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
NXF3Q9H4D5 SNORA31.9-201ENST00000516429 84 ntBASIC4.75□□□□□ -1.65
NXF3Q9H4D5 RN7SKP21-201ENST00000516503 220 ntBASIC4.75□□□□□ -1.65
NXF3Q9H4D5 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.75□□□□□ -1.65
NXF3Q9H4D5 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.75□□□□□ -1.65
NXF3Q9H4D5 AP001804.2-201ENST00000533932 910 ntBASIC4.75□□□□□ -1.65
NXF3Q9H4D5 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
NXF3Q9H4D5 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC4.75□□□□□ -1.65
NXF3Q9H4D5 AL109766.1-201ENST00000555080 552 ntBASIC4.75□□□□□ -1.65
NXF3Q9H4D5 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC4.75□□□□□ -1.65
NXF3Q9H4D5 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC4.75□□□□□ -1.65
NXF3Q9H4D5 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC4.75□□□□□ -1.65
NXF3Q9H4D5 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
NXF3Q9H4D5 AP003400.2-201ENST00000624036 666 ntBASIC4.75□□□□□ -1.65
NXF3Q9H4D5 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
NXF3Q9H4D5 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.75□□□□□ -1.65
NXF3Q9H4D5 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.75□□□□□ -1.65
NXF3Q9H4D5 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
NXF3Q9H4D5 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
NXF3Q9H4D5 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.75□□□□□ -1.65
NXF3Q9H4D5 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.75□□□□□ -1.65
NXF3Q9H4D5 AL513548.1-201ENST00000562904 1724 ntBASIC4.75□□□□□ -1.65
NXF3Q9H4D5 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
NXF3Q9H4D5 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
NXF3Q9H4D5 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
NXF3Q9H4D5 MFSD8-220ENST00000641243 1422 ntBASIC4.74□□□□□ -1.65
NXF3Q9H4D5 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.74□□□□□ -1.65
NXF3Q9H4D5 FTO-203ENST00000460382 1517 ntTSL 5 BASIC4.74□□□□□ -1.65
NXF3Q9H4D5 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
NXF3Q9H4D5 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
NXF3Q9H4D5 AL121657.1-201ENST00000327215 531 ntBASIC4.74□□□□□ -1.65
NXF3Q9H4D5 MIR383-201ENST00000362257 73 ntBASIC4.74□□□□□ -1.65
NXF3Q9H4D5 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
NXF3Q9H4D5 AMZ2P2-201ENST00000406819 1057 ntBASIC4.74□□□□□ -1.65
NXF3Q9H4D5 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC4.74□□□□□ -1.65
NXF3Q9H4D5 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC4.74□□□□□ -1.65
NXF3Q9H4D5 CDY14P-201ENST00000431260 1014 ntBASIC4.74□□□□□ -1.65
NXF3Q9H4D5 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.74□□□□□ -1.65
NXF3Q9H4D5 RPEP2-201ENST00000432149 701 ntBASIC4.74□□□□□ -1.65
NXF3Q9H4D5 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
NXF3Q9H4D5 CDY12P-201ENST00000440679 1015 ntBASIC4.74□□□□□ -1.65
NXF3Q9H4D5 CDY13P-201ENST00000445813 1015 ntBASIC4.74□□□□□ -1.65
NXF3Q9H4D5 CDY23P-201ENST00000451661 1014 ntBASIC4.74□□□□□ -1.65
NXF3Q9H4D5 DDX39BP2-208ENST00000453923 258 ntBASIC4.74□□□□□ -1.65
NXF3Q9H4D5 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC4.74□□□□□ -1.65
NXF3Q9H4D5 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.74□□□□□ -1.65
NXF3Q9H4D5 AC112206.1-201ENST00000468416 477 ntBASIC4.74□□□□□ -1.65
NXF3Q9H4D5 RN7SL691P-201ENST00000494487 301 ntBASIC4.74□□□□□ -1.65
NXF3Q9H4D5 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC4.74□□□□□ -1.65
NXF3Q9H4D5 AP003730.1-201ENST00000524605 285 ntBASIC4.74□□□□□ -1.65
NXF3Q9H4D5 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC4.74□□□□□ -1.65
NXF3Q9H4D5 RN7SL176P-201ENST00000580352 264 ntBASIC4.74□□□□□ -1.65
NXF3Q9H4D5 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC4.74□□□□□ -1.65
NXF3Q9H4D5 AC010201.1-201ENST00000605051 540 ntBASIC4.74□□□□□ -1.65
NXF3Q9H4D5 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms