Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC4.31□□□□□ -1.72
SSX3Q99909 AP000769.2-201ENST00000602344 396 ntBASIC4.31□□□□□ -1.72
SSX3Q99909 AC005252.1-201ENST00000604518 1063 ntBASIC4.31□□□□□ -1.72
SSX3Q99909 AC004948.1-201ENST00000609858 672 ntBASIC4.31□□□□□ -1.72
SSX3Q99909 PDCD6IPP1-202ENST00000622242 1064 ntBASIC4.31□□□□□ -1.72
SSX3Q99909 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.31□□□□□ -1.72
SSX3Q99909 AC073869.10-201ENST00000642016 354 ntBASIC4.31□□□□□ -1.72
SSX3Q99909 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SSX3Q99909 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SSX3Q99909 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
SSX3Q99909 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
SSX3Q99909 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SSX3Q99909 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
SSX3Q99909 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
SSX3Q99909 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.3□□□□□ -1.72
SSX3Q99909 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.3□□□□□ -1.72
SSX3Q99909 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SSX3Q99909 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.3□□□□□ -1.72
SSX3Q99909 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.3□□□□□ -1.72
SSX3Q99909 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SSX3Q99909 RPL23P2-201ENST00000320371 421 ntBASIC4.3□□□□□ -1.72
SSX3Q99909 RNA5SP507-201ENST00000363603 121 ntBASIC4.3□□□□□ -1.72
SSX3Q99909 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SSX3Q99909 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SSX3Q99909 RNU6-98P-201ENST00000384173 107 ntBASIC4.3□□□□□ -1.72
SSX3Q99909 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
SSX3Q99909 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC4.3□□□□□ -1.72
SSX3Q99909 LAP3P1-201ENST00000403648 294 ntBASIC4.3□□□□□ -1.72
SSX3Q99909 RNU6ATAC21P-201ENST00000408656 126 ntBASIC4.3□□□□□ -1.72
SSX3Q99909 UBE2V1P11-201ENST00000411559 285 ntBASIC4.3□□□□□ -1.72
SSX3Q99909 DPPA2P3-201ENST00000411853 655 ntBASIC4.3□□□□□ -1.72
SSX3Q99909 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.3□□□□□ -1.72
SSX3Q99909 MTND2P15-201ENST00000418575 892 ntBASIC4.3□□□□□ -1.72
SSX3Q99909 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC4.3□□□□□ -1.72
SSX3Q99909 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SSX3Q99909 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC4.3□□□□□ -1.72
SSX3Q99909 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC4.3□□□□□ -1.72
SSX3Q99909 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC4.3□□□□□ -1.72
SSX3Q99909 EEF1B2P5-201ENST00000444820 548 ntBASIC4.3□□□□□ -1.72
SSX3Q99909 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SSX3Q99909 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC4.3□□□□□ -1.72
SSX3Q99909 AC005532.2-201ENST00000467154 373 ntBASIC4.3□□□□□ -1.72
SSX3Q99909 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC4.3□□□□□ -1.72
SSX3Q99909 RN7SL222P-201ENST00000476452 299 ntBASIC4.3□□□□□ -1.72
SSX3Q99909 AC004815.1-201ENST00000484185 331 ntBASIC4.3□□□□□ -1.72
SSX3Q99909 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.3□□□□□ -1.72
SSX3Q99909 AC008953.1-201ENST00000497334 318 ntBASIC4.3□□□□□ -1.72
SSX3Q99909 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
SSX3Q99909 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC4.3□□□□□ -1.72
SSX3Q99909 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC4.3□□□□□ -1.72
SSX3Q99909 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC4.3□□□□□ -1.72
SSX3Q99909 AC022832.1-201ENST00000530718 645 ntBASIC4.3□□□□□ -1.72
SSX3Q99909 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC4.3□□□□□ -1.72
SSX3Q99909 UBTFL9-201ENST00000534504 1148 ntBASIC4.3□□□□□ -1.72
SSX3Q99909 AC025260.1-201ENST00000548858 430 ntBASIC4.3□□□□□ -1.72
SSX3Q99909 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC4.3□□□□□ -1.72
SSX3Q99909 RN7SL356P-201ENST00000582228 248 ntBASIC4.3□□□□□ -1.72
SSX3Q99909 AC005776.1-201ENST00000603164 290 ntBASIC4.3□□□□□ -1.72
SSX3Q99909 TAS2R6P-201ENST00000605022 826 ntBASIC4.3□□□□□ -1.72
SSX3Q99909 AL021707.7-201ENST00000607991 416 ntBASIC4.3□□□□□ -1.72
SSX3Q99909 RPSAP73-201ENST00000614820 330 ntBASIC4.3□□□□□ -1.72
SSX3Q99909 AL163051.2-201ENST00000618976 735 ntBASIC4.3□□□□□ -1.72
SSX3Q99909 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC4.3□□□□□ -1.72
SSX3Q99909 AC018445.2-201ENST00000622987 260 ntBASIC4.3□□□□□ -1.72
SSX3Q99909 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
SSX3Q99909 AC009452.1-201ENST00000640823 606 ntBASIC4.3□□□□□ -1.72
SSX3Q99909 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SSX3Q99909 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC4.3□□□□□ -1.72
SSX3Q99909 SALL4P2-201ENST00000423288 2910 ntBASIC4.3□□□□□ -1.72
SSX3Q99909 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SSX3Q99909 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SSX3Q99909 KPNA2P2-201ENST00000419546 1489 ntBASIC4.3□□□□□ -1.72
SSX3Q99909 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SSX3Q99909 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
SSX3Q99909 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.3□□□□□ -1.72
SSX3Q99909 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
SSX3Q99909 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.3□□□□□ -1.72
SSX3Q99909 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.29□□□□□ -1.72
SSX3Q99909 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SSX3Q99909 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SSX3Q99909 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SSX3Q99909 AC090229.1-201ENST00000590983 1609 ntBASIC4.29□□□□□ -1.72
SSX3Q99909 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
SSX3Q99909 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SSX3Q99909 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.29□□□□□ -1.72
SSX3Q99909 AL445487.1-201ENST00000415694 1580 ntBASIC4.29□□□□□ -1.72
SSX3Q99909 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SSX3Q99909 RNU6-796P-201ENST00000391086 107 ntBASIC4.29□□□□□ -1.72
SSX3Q99909 ATP5F1P6-201ENST00000402768 767 ntBASIC4.29□□□□□ -1.72
SSX3Q99909 PPIAP9-201ENST00000403866 498 ntBASIC4.29□□□□□ -1.72
SSX3Q99909 DUTP5-201ENST00000406790 469 ntBASIC4.29□□□□□ -1.72
SSX3Q99909 RNU4-27P-201ENST00000410889 139 ntBASIC4.29□□□□□ -1.72
SSX3Q99909 AL450992.3-201ENST00000413192 568 ntBASIC4.29□□□□□ -1.72
SSX3Q99909 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC4.29□□□□□ -1.72
SSX3Q99909 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SSX3Q99909 PNRC2P1-201ENST00000423940 420 ntBASIC4.29□□□□□ -1.72
SSX3Q99909 VN1R42P-201ENST00000424651 344 ntBASIC4.29□□□□□ -1.72
SSX3Q99909 RWDD4P2-201ENST00000426392 563 ntBASIC4.29□□□□□ -1.72
SSX3Q99909 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SSX3Q99909 FTH1P16-201ENST00000435241 552 ntBASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms