Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 VN1R32P-201ENST00000452234 905 ntBASIC5.6□□□□□ -1.51
ABCA3Q99758 RPS20P21-201ENST00000466859 343 ntBASIC5.6□□□□□ -1.51
ABCA3Q99758 RPS26P28-201ENST00000470806 348 ntBASIC5.6□□□□□ -1.51
ABCA3Q99758 PAICSP4-201ENST00000517543 1253 ntBASIC5.6□□□□□ -1.51
ABCA3Q99758 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC5.6□□□□□ -1.51
ABCA3Q99758 AC110743.1-201ENST00000584870 478 ntBASIC5.6□□□□□ -1.51
ABCA3Q99758 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC5.6□□□□□ -1.51
ABCA3Q99758 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC5.59□□□□□ -1.51
ABCA3Q99758 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC5.59□□□□□ -1.51
ABCA3Q99758 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
ABCA3Q99758 AC073136.1-201ENST00000449426 2884 ntBASIC5.59□□□□□ -1.51
ABCA3Q99758 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.59□□□□□ -1.51
ABCA3Q99758 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
ABCA3Q99758 AC006042.3-201ENST00000454684 1469 ntBASIC5.59□□□□□ -1.51
ABCA3Q99758 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
ABCA3Q99758 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
ABCA3Q99758 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
ABCA3Q99758 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC5.59□□□□□ -1.51
ABCA3Q99758 OR4F13P-201ENST00000428478 931 ntBASIC5.59□□□□□ -1.51
ABCA3Q99758 AC104978.1-201ENST00000449387 391 ntBASIC5.59□□□□□ -1.51
ABCA3Q99758 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC5.59□□□□□ -1.51
ABCA3Q99758 GAPDHP36-201ENST00000480688 918 ntBASIC5.59□□□□□ -1.51
ABCA3Q99758 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC5.59□□□□□ -1.51
ABCA3Q99758 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC5.59□□□□□ -1.51
ABCA3Q99758 AC119751.5-201ENST00000514077 770 ntBASIC5.59□□□□□ -1.51
ABCA3Q99758 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC5.59□□□□□ -1.51
ABCA3Q99758 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC5.59□□□□□ -1.51
ABCA3Q99758 AC011471.1-201ENST00000585766 187 ntBASIC5.59□□□□□ -1.51
ABCA3Q99758 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC5.59□□□□□ -1.51
ABCA3Q99758 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
ABCA3Q99758 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC5.59□□□□□ -1.51
ABCA3Q99758 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.59□□□□□ -1.51
ABCA3Q99758 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
ABCA3Q99758 ERCC6-202ENST00000374127 1782 ntBASIC5.59□□□□□ -1.52
ABCA3Q99758 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
ABCA3Q99758 DMD-205ENST00000359836 7339 ntTSL 5 BASIC5.58□□□□□ -1.52
ABCA3Q99758 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC5.58□□□□□ -1.52
ABCA3Q99758 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC5.58□□□□□ -1.52
ABCA3Q99758 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
ABCA3Q99758 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.58□□□□□ -1.52
ABCA3Q99758 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
ABCA3Q99758 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
ABCA3Q99758 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC5.58□□□□□ -1.52
ABCA3Q99758 MIR921-201ENST00000401133 56 ntBASIC5.58□□□□□ -1.52
ABCA3Q99758 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC5.58□□□□□ -1.52
ABCA3Q99758 AC006011.1-201ENST00000442758 349 ntBASIC5.58□□□□□ -1.52
ABCA3Q99758 AC007967.1-201ENST00000455422 1159 ntBASIC5.58□□□□□ -1.52
ABCA3Q99758 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC5.58□□□□□ -1.52
ABCA3Q99758 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC5.58□□□□□ -1.52
ABCA3Q99758 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC5.58□□□□□ -1.52
ABCA3Q99758 AC234782.5-201ENST00000617723 324 ntBASIC5.58□□□□□ -1.52
ABCA3Q99758 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC5.58□□□□□ -1.52
ABCA3Q99758 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
ABCA3Q99758 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
ABCA3Q99758 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
ABCA3Q99758 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
ABCA3Q99758 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
ABCA3Q99758 PTMAP5-201ENST00000393073 333 ntBASIC5.57□□□□□ -1.52
ABCA3Q99758 BOLA3P4-201ENST00000418151 400 ntBASIC5.57□□□□□ -1.52
ABCA3Q99758 NMNAT1P2-201ENST00000435192 860 ntBASIC5.57□□□□□ -1.52
ABCA3Q99758 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
ABCA3Q99758 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
ABCA3Q99758 RPL7P22-201ENST00000466005 733 ntBASIC5.57□□□□□ -1.52
ABCA3Q99758 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC5.57□□□□□ -1.52
ABCA3Q99758 RPS29P19-201ENST00000479709 171 ntBASIC5.57□□□□□ -1.52
ABCA3Q99758 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.57□□□□□ -1.52
ABCA3Q99758 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
ABCA3Q99758 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC5.57□□□□□ -1.52
ABCA3Q99758 AL049634.3-201ENST00000604968 457 ntBASIC5.57□□□□□ -1.52
ABCA3Q99758 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC5.57□□□□□ -1.52
ABCA3Q99758 AL031658.2-201ENST00000616850 651 ntBASIC5.57□□□□□ -1.52
ABCA3Q99758 CA1-225ENST00000626824 2405 ntTSL 5 BASIC5.57□□□□□ -1.52
ABCA3Q99758 PCAT14-202ENST00000627127 3935 ntBASIC5.57□□□□□ -1.52
ABCA3Q99758 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.57□□□□□ -1.52
ABCA3Q99758 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
ABCA3Q99758 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
ABCA3Q99758 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
ABCA3Q99758 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
ABCA3Q99758 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
ABCA3Q99758 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
ABCA3Q99758 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
ABCA3Q99758 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
ABCA3Q99758 ATP5F1P4-201ENST00000397288 746 ntBASIC5.57□□□□□ -1.52
ABCA3Q99758 TMX2P1-201ENST00000436507 708 ntBASIC5.57□□□□□ -1.52
ABCA3Q99758 AL157385.1-201ENST00000446973 268 ntBASIC5.57□□□□□ -1.52
ABCA3Q99758 AC115115.1-201ENST00000449927 248 ntBASIC5.57□□□□□ -1.52
ABCA3Q99758 AC069304.1-201ENST00000491593 704 ntBASIC5.57□□□□□ -1.52
ABCA3Q99758 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
ABCA3Q99758 NPM1P5-201ENST00000557228 838 ntBASIC5.57□□□□□ -1.52
ABCA3Q99758 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC5.57□□□□□ -1.52
ABCA3Q99758 MIR3651-201ENST00000630427 90 ntBASIC5.57□□□□□ -1.52
ABCA3Q99758 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
ABCA3Q99758 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
ABCA3Q99758 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
ABCA3Q99758 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
ABCA3Q99758 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
ABCA3Q99758 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
ABCA3Q99758 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
ABCA3Q99758 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
ABCA3Q99758 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms