Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC5.82□□□□□ -1.48
PTCHD1Q96NR3 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC5.82□□□□□ -1.48
PTCHD1Q96NR3 RPS7P5-201ENST00000441482 581 ntBASIC5.82□□□□□ -1.48
PTCHD1Q96NR3 AL022238.1-201ENST00000442557 355 ntBASIC5.82□□□□□ -1.48
PTCHD1Q96NR3 RPL7P36-201ENST00000444633 681 ntBASIC5.82□□□□□ -1.48
PTCHD1Q96NR3 GAPDHP23-201ENST00000444823 993 ntBASIC5.82□□□□□ -1.48
PTCHD1Q96NR3 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC5.82□□□□□ -1.48
PTCHD1Q96NR3 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC5.82□□□□□ -1.48
PTCHD1Q96NR3 SNRPFP4-201ENST00000456366 242 ntBASIC5.82□□□□□ -1.48
PTCHD1Q96NR3 AC009963.3-201ENST00000458090 486 ntBASIC5.82□□□□□ -1.48
PTCHD1Q96NR3 AL672167.3-201ENST00000465951 960 ntBASIC5.82□□□□□ -1.48
PTCHD1Q96NR3 RN7SL165P-201ENST00000477476 291 ntBASIC5.82□□□□□ -1.48
PTCHD1Q96NR3 AC092989.1-201ENST00000481235 277 ntBASIC5.82□□□□□ -1.48
PTCHD1Q96NR3 PPP1R11P1-201ENST00000486095 376 ntBASIC5.82□□□□□ -1.48
PTCHD1Q96NR3 PDLIM1P4-201ENST00000504327 1006 ntBASIC5.82□□□□□ -1.48
PTCHD1Q96NR3 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC5.82□□□□□ -1.48
PTCHD1Q96NR3 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC5.82□□□□□ -1.48
PTCHD1Q96NR3 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC5.82□□□□□ -1.48
PTCHD1Q96NR3 AC098799.2-201ENST00000509466 868 ntBASIC5.82□□□□□ -1.48
PTCHD1Q96NR3 AC117522.1-201ENST00000509821 380 ntBASIC5.82□□□□□ -1.48
PTCHD1Q96NR3 RNU6-1261P-201ENST00000517194 104 ntBASIC5.82□□□□□ -1.48
PTCHD1Q96NR3 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC5.82□□□□□ -1.48
PTCHD1Q96NR3 RGS5-218ENST00000526176 574 ntTSL 4 BASIC5.82□□□□□ -1.48
PTCHD1Q96NR3 AP002748.2-201ENST00000528671 348 ntBASIC5.82□□□□□ -1.48
PTCHD1Q96NR3 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC5.82□□□□□ -1.48
PTCHD1Q96NR3 AC006512.2-201ENST00000543250 486 ntBASIC5.82□□□□□ -1.48
PTCHD1Q96NR3 AC091489.2-201ENST00000566263 604 ntBASIC5.82□□□□□ -1.48
PTCHD1Q96NR3 AC136618.2-201ENST00000575091 400 ntBASIC5.82□□□□□ -1.48
PTCHD1Q96NR3 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC5.82□□□□□ -1.48
PTCHD1Q96NR3 AC027229.1-201ENST00000583887 253 ntBASIC5.82□□□□□ -1.48
PTCHD1Q96NR3 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC5.82□□□□□ -1.48
PTCHD1Q96NR3 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.82□□□□□ -1.48
PTCHD1Q96NR3 GLYATL1P2-202ENST00000588046 902 ntBASIC5.82□□□□□ -1.48
PTCHD1Q96NR3 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
PTCHD1Q96NR3 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.82□□□□□ -1.48
PTCHD1Q96NR3 AL137072.1-201ENST00000603444 466 ntBASIC5.82□□□□□ -1.48
PTCHD1Q96NR3 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.82□□□□□ -1.48
PTCHD1Q96NR3 AC009704.2-201ENST00000618739 483 ntBASIC5.82□□□□□ -1.48
PTCHD1Q96NR3 AC018926.3-201ENST00000618841 406 ntBASIC5.82□□□□□ -1.48
PTCHD1Q96NR3 FAM27E2-201ENST00000619668 403 ntBASIC5.82□□□□□ -1.48
PTCHD1Q96NR3 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC5.82□□□□□ -1.48
PTCHD1Q96NR3 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
PTCHD1Q96NR3 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC5.82□□□□□ -1.48
PTCHD1Q96NR3 AC024651.2-201ENST00000562480 2098 ntBASIC5.82□□□□□ -1.48
PTCHD1Q96NR3 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
PTCHD1Q96NR3 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
PTCHD1Q96NR3 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
PTCHD1Q96NR3 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
PTCHD1Q96NR3 AC015689.2-201ENST00000528172 1738 ntBASIC5.82□□□□□ -1.48
PTCHD1Q96NR3 AC110373.1-201ENST00000505994 3505 ntBASIC5.82□□□□□ -1.48
PTCHD1Q96NR3 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.82□□□□□ -1.48
PTCHD1Q96NR3 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC5.82□□□□□ -1.48
PTCHD1Q96NR3 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
PTCHD1Q96NR3 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
PTCHD1Q96NR3 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
PTCHD1Q96NR3 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PTCHD1Q96NR3 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
PTCHD1Q96NR3 DBF4P1-201ENST00000412976 1892 ntBASIC5.81□□□□□ -1.48
PTCHD1Q96NR3 MTND4P29-201ENST00000503122 1372 ntBASIC5.81□□□□□ -1.48
PTCHD1Q96NR3 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PTCHD1Q96NR3 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
PTCHD1Q96NR3 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC5.81□□□□□ -1.48
PTCHD1Q96NR3 AC018628.1-201ENST00000624147 3819 ntBASIC5.81□□□□□ -1.48
PTCHD1Q96NR3 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC5.81□□□□□ -1.48
PTCHD1Q96NR3 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PTCHD1Q96NR3 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PTCHD1Q96NR3 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PTCHD1Q96NR3 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC5.81□□□□□ -1.48
PTCHD1Q96NR3 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.81□□□□□ -1.48
PTCHD1Q96NR3 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
PTCHD1Q96NR3 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
PTCHD1Q96NR3 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PTCHD1Q96NR3 SNORA72.1-201ENST00000363485 129 ntBASIC5.81□□□□□ -1.48
PTCHD1Q96NR3 SNORD8-201ENST00000363915 110 ntBASIC5.81□□□□□ -1.48
PTCHD1Q96NR3 SNORD116-23-201ENST00000384645 92 ntBASIC5.81□□□□□ -1.48
PTCHD1Q96NR3 MIR621-201ENST00000384919 96 ntBASIC5.81□□□□□ -1.48
PTCHD1Q96NR3 CIR1P3-201ENST00000405137 479 ntBASIC5.81□□□□□ -1.48
PTCHD1Q96NR3 RNA5SP156-201ENST00000410250 110 ntBASIC5.81□□□□□ -1.48
PTCHD1Q96NR3 RNU6-248P-201ENST00000410720 107 ntBASIC5.81□□□□□ -1.48
PTCHD1Q96NR3 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC5.81□□□□□ -1.48
PTCHD1Q96NR3 AL596448.1-201ENST00000415024 392 ntBASIC5.81□□□□□ -1.48
PTCHD1Q96NR3 BOLA3P4-201ENST00000418151 400 ntBASIC5.81□□□□□ -1.48
PTCHD1Q96NR3 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC5.81□□□□□ -1.48
PTCHD1Q96NR3 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC5.81□□□□□ -1.48
PTCHD1Q96NR3 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC5.81□□□□□ -1.48
PTCHD1Q96NR3 NPM1P22-201ENST00000427761 952 ntBASIC5.81□□□□□ -1.48
PTCHD1Q96NR3 HMGB3P10-201ENST00000434734 572 ntBASIC5.81□□□□□ -1.48
PTCHD1Q96NR3 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC5.81□□□□□ -1.48
PTCHD1Q96NR3 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC5.81□□□□□ -1.48
PTCHD1Q96NR3 Z99127.3-201ENST00000448158 395 ntBASIC5.81□□□□□ -1.48
PTCHD1Q96NR3 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC5.81□□□□□ -1.48
PTCHD1Q96NR3 NPM1P39-201ENST00000449818 867 ntBASIC5.81□□□□□ -1.48
PTCHD1Q96NR3 AC146507.1-201ENST00000468335 354 ntBASIC5.81□□□□□ -1.48
PTCHD1Q96NR3 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC5.81□□□□□ -1.48
PTCHD1Q96NR3 AC117394.1-201ENST00000477323 567 ntBASIC5.81□□□□□ -1.48
PTCHD1Q96NR3 AC015724.1-201ENST00000478577 156 ntBASIC5.81□□□□□ -1.48
PTCHD1Q96NR3 RPS27P23-201ENST00000487608 251 ntBASIC5.81□□□□□ -1.48
PTCHD1Q96NR3 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PTCHD1Q96NR3 OR7E99P-201ENST00000505750 922 ntBASIC5.81□□□□□ -1.48
PTCHD1Q96NR3 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 190.9 ms