Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC1.36□□□□□ -2.19
SYNE1Q8NF91 Z95327.1-201ENST00000446082 482 ntBASIC1.36□□□□□ -2.19
SYNE1Q8NF91 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC1.36□□□□□ -2.19
SYNE1Q8NF91 AC026782.2-201ENST00000510845 636 ntBASIC1.36□□□□□ -2.19
SYNE1Q8NF91 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC1.36□□□□□ -2.19
SYNE1Q8NF91 MIR4660-201ENST00000583549 74 ntBASIC1.36□□□□□ -2.19
SYNE1Q8NF91 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC1.36□□□□□ -2.19
SYNE1Q8NF91 AC091953.5-201ENST00000622919 233 ntBASIC1.36□□□□□ -2.19
SYNE1Q8NF91 AC090506.2-201ENST00000624521 419 ntBASIC1.36□□□□□ -2.19
SYNE1Q8NF91 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC1.36□□□□□ -2.19
SYNE1Q8NF91 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
SYNE1Q8NF91 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
SYNE1Q8NF91 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
SYNE1Q8NF91 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
SYNE1Q8NF91 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
SYNE1Q8NF91 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC1.36□□□□□ -2.19
SYNE1Q8NF91 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
SYNE1Q8NF91 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
SYNE1Q8NF91 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC1.36□□□□□ -2.19
SYNE1Q8NF91 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC1.36□□□□□ -2.19
SYNE1Q8NF91 RPL21P43-201ENST00000425440 472 ntBASIC1.36□□□□□ -2.19
SYNE1Q8NF91 AC090018.1-201ENST00000434369 367 ntBASIC1.36□□□□□ -2.19
SYNE1Q8NF91 AC073052.1-201ENST00000440417 714 ntBASIC1.36□□□□□ -2.19
SYNE1Q8NF91 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC1.36□□□□□ -2.19
SYNE1Q8NF91 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC1.36□□□□□ -2.19
SYNE1Q8NF91 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC1.36□□□□□ -2.19
SYNE1Q8NF91 AC005868.1-201ENST00000536421 331 ntBASIC1.36□□□□□ -2.19
SYNE1Q8NF91 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC1.36□□□□□ -2.19
SYNE1Q8NF91 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC1.36□□□□□ -2.19
SYNE1Q8NF91 AC127024.5-201ENST00000580085 462 ntBASIC1.36□□□□□ -2.19
SYNE1Q8NF91 OR51C1P-201ENST00000608504 942 ntBASIC1.36□□□□□ -2.19
SYNE1Q8NF91 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
SYNE1Q8NF91 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC1.36□□□□□ -2.19
SYNE1Q8NF91 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC1.36□□□□□ -2.19
SYNE1Q8NF91 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
SYNE1Q8NF91 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC1.36□□□□□ -2.19
SYNE1Q8NF91 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
SYNE1Q8NF91 TRAV35-201ENST00000390462 330 ntBASIC1.36□□□□□ -2.19
SYNE1Q8NF91 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
SYNE1Q8NF91 PPIAP31-201ENST00000405422 495 ntBASIC1.36□□□□□ -2.19
SYNE1Q8NF91 NDUFA5P1-201ENST00000433858 341 ntBASIC1.36□□□□□ -2.19
SYNE1Q8NF91 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC1.36□□□□□ -2.19
SYNE1Q8NF91 H2AFZP5-201ENST00000446960 382 ntBASIC1.36□□□□□ -2.19
SYNE1Q8NF91 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC1.36□□□□□ -2.19
SYNE1Q8NF91 AC090142.1-201ENST00000465776 462 ntBASIC1.36□□□□□ -2.19
SYNE1Q8NF91 RPL7L1P8-201ENST00000469911 741 ntBASIC1.36□□□□□ -2.19
SYNE1Q8NF91 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC1.36□□□□□ -2.19
SYNE1Q8NF91 AL133372.1-201ENST00000493565 745 ntBASIC1.36□□□□□ -2.19
SYNE1Q8NF91 RN7SL691P-201ENST00000494487 301 ntBASIC1.36□□□□□ -2.19
SYNE1Q8NF91 AK3P4-201ENST00000504283 583 ntBASIC1.36□□□□□ -2.19
SYNE1Q8NF91 IGLVVI-25-1-201ENST00000521893 249 ntBASIC1.36□□□□□ -2.19
SYNE1Q8NF91 AC138701.1-201ENST00000524329 714 ntBASIC1.36□□□□□ -2.19
SYNE1Q8NF91 AC010547.7-201ENST00000570323 333 ntBASIC1.36□□□□□ -2.19
SYNE1Q8NF91 AC069366.1-201ENST00000583159 838 ntBASIC1.36□□□□□ -2.19
SYNE1Q8NF91 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC1.36□□□□□ -2.19
SYNE1Q8NF91 BX005214.3-202ENST00000619809 325 ntBASIC1.36□□□□□ -2.19
SYNE1Q8NF91 AC019206.1-201ENST00000621938 425 ntBASIC1.36□□□□□ -2.19
SYNE1Q8NF91 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
SYNE1Q8NF91 AC016831.1-201ENST00000432045 6411 ntTSL 2 BASIC1.36□□□□□ -2.19
SYNE1Q8NF91 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC1.36□□□□□ -2.19
SYNE1Q8NF91 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC1.36□□□□□ -2.19
SYNE1Q8NF91 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC1.36□□□□□ -2.19
SYNE1Q8NF91 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
SYNE1Q8NF91 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC1.36□□□□□ -2.19
SYNE1Q8NF91 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC1.36□□□□□ -2.19
SYNE1Q8NF91 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
SYNE1Q8NF91 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC1.36□□□□□ -2.19
SYNE1Q8NF91 RNU6-1279P-201ENST00000383917 103 ntBASIC1.36□□□□□ -2.19
SYNE1Q8NF91 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC1.36□□□□□ -2.19
SYNE1Q8NF91 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
SYNE1Q8NF91 RN7SL429P-201ENST00000479090 223 ntBASIC1.36□□□□□ -2.19
SYNE1Q8NF91 RN7SL489P-201ENST00000486185 223 ntBASIC1.36□□□□□ -2.19
SYNE1Q8NF91 RN7SL327P-201ENST00000488659 223 ntBASIC1.36□□□□□ -2.19
SYNE1Q8NF91 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC1.36□□□□□ -2.19
SYNE1Q8NF91 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC1.36□□□□□ -2.19
SYNE1Q8NF91 KC877982.1-201ENST00000602313 470 ntBASIC1.36□□□□□ -2.19
SYNE1Q8NF91 AC010201.1-201ENST00000605051 540 ntBASIC1.36□□□□□ -2.19
SYNE1Q8NF91 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC1.36□□□□□ -2.19
SYNE1Q8NF91 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC1.36□□□□□ -2.19
SYNE1Q8NF91 RN7SL853P-201ENST00000617250 223 ntBASIC1.36□□□□□ -2.19
SYNE1Q8NF91 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
SYNE1Q8NF91 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
SYNE1Q8NF91 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC1.36□□□□□ -2.19
SYNE1Q8NF91 AP001642.1-201ENST00000624727 2117 ntBASIC1.36□□□□□ -2.19
SYNE1Q8NF91 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
SYNE1Q8NF91 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
SYNE1Q8NF91 AL355852.1-201ENST00000454081 1771 ntBASIC1.36□□□□□ -2.19
SYNE1Q8NF91 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
SYNE1Q8NF91 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
SYNE1Q8NF91 SDHCP2-201ENST00000398565 501 ntBASIC1.36□□□□□ -2.19
SYNE1Q8NF91 AL592291.1-201ENST00000403830 352 ntBASIC1.36□□□□□ -2.19
SYNE1Q8NF91 AL157884.3-201ENST00000448273 1184 ntBASIC1.36□□□□□ -2.19
SYNE1Q8NF91 AL500522.2-201ENST00000448562 343 ntBASIC1.36□□□□□ -2.19
SYNE1Q8NF91 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC1.36□□□□□ -2.19
SYNE1Q8NF91 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC1.36□□□□□ -2.19
SYNE1Q8NF91 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
SYNE1Q8NF91 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
SYNE1Q8NF91 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC1.36□□□□□ -2.19
SYNE1Q8NF91 AC116158.1-201ENST00000560231 2129 ntBASIC1.36□□□□□ -2.19
SYNE1Q8NF91 AC090515.3-201ENST00000560431 315 ntBASIC1.36□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms