Protein–RNA interactions for Protein: Q8N4P3

HDDC3, Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase MESH1, humanhuman

Predictions only

Length 179 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3Q8N4P3 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC4.87□□□□□ -1.63
HDDC3Q8N4P3 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.87□□□□□ -1.63
HDDC3Q8N4P3 AL049839.1-201ENST00000556151 657 ntBASIC4.87□□□□□ -1.63
HDDC3Q8N4P3 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC4.87□□□□□ -1.63
HDDC3Q8N4P3 AC098935.2-201ENST00000604222 466 ntBASIC4.87□□□□□ -1.63
HDDC3Q8N4P3 AC016911.1-201ENST00000613297 452 ntBASIC4.87□□□□□ -1.63
HDDC3Q8N4P3 AC068831.8-201ENST00000620171 435 ntBASIC4.87□□□□□ -1.63
HDDC3Q8N4P3 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC4.87□□□□□ -1.63
HDDC3Q8N4P3 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.87□□□□□ -1.63
HDDC3Q8N4P3 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
HDDC3Q8N4P3 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
HDDC3Q8N4P3 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
HDDC3Q8N4P3 AC010928.1-201ENST00000592477 1447 ntBASIC4.87□□□□□ -1.63
HDDC3Q8N4P3 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
HDDC3Q8N4P3 MAPK10-304ENST00000641341 3984 ntBASIC4.87□□□□□ -1.63
HDDC3Q8N4P3 AL132640.2-201ENST00000559968 1698 ntBASIC4.86□□□□□ -1.63
HDDC3Q8N4P3 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
HDDC3Q8N4P3 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
HDDC3Q8N4P3 RNA5SP479-201ENST00000364858 117 ntBASIC4.86□□□□□ -1.63
HDDC3Q8N4P3 SNORA27.3-201ENST00000364937 134 ntBASIC4.86□□□□□ -1.63
HDDC3Q8N4P3 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.63
HDDC3Q8N4P3 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
HDDC3Q8N4P3 AC013429.2-201ENST00000418798 781 ntBASIC4.86□□□□□ -1.63
HDDC3Q8N4P3 GTF2IP2-201ENST00000424290 697 ntBASIC4.86□□□□□ -1.63
HDDC3Q8N4P3 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC4.86□□□□□ -1.63
HDDC3Q8N4P3 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC4.86□□□□□ -1.63
HDDC3Q8N4P3 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC4.86□□□□□ -1.63
HDDC3Q8N4P3 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC4.86□□□□□ -1.63
HDDC3Q8N4P3 RPL23AP12-201ENST00000467573 473 ntBASIC4.86□□□□□ -1.63
HDDC3Q8N4P3 RN7SL817P-201ENST00000480777 288 ntBASIC4.86□□□□□ -1.63
HDDC3Q8N4P3 AC083829.1-201ENST00000503756 657 ntBASIC4.86□□□□□ -1.63
HDDC3Q8N4P3 MYL12BP2-201ENST00000503948 512 ntBASIC4.86□□□□□ -1.63
HDDC3Q8N4P3 SLC25A15P5-201ENST00000508033 253 ntBASIC4.86□□□□□ -1.63
HDDC3Q8N4P3 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.86□□□□□ -1.63
HDDC3Q8N4P3 RNU6-889P-201ENST00000517189 103 ntBASIC4.86□□□□□ -1.63
HDDC3Q8N4P3 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC4.86□□□□□ -1.63
HDDC3Q8N4P3 BUD31P1-201ENST00000521828 359 ntBASIC4.86□□□□□ -1.63
HDDC3Q8N4P3 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC4.86□□□□□ -1.63
HDDC3Q8N4P3 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
HDDC3Q8N4P3 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC4.86□□□□□ -1.63
HDDC3Q8N4P3 RN7SL690P-201ENST00000582087 240 ntBASIC4.86□□□□□ -1.63
HDDC3Q8N4P3 AP005262.1-201ENST00000582646 997 ntBASIC4.86□□□□□ -1.63
HDDC3Q8N4P3 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.86□□□□□ -1.63
HDDC3Q8N4P3 AL356218.2-201ENST00000605264 187 ntBASIC4.86□□□□□ -1.63
HDDC3Q8N4P3 AC090525.3-201ENST00000605601 189 ntBASIC4.86□□□□□ -1.63
HDDC3Q8N4P3 MLECP1-201ENST00000615893 709 ntBASIC4.86□□□□□ -1.63
HDDC3Q8N4P3 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC4.86□□□□□ -1.63
HDDC3Q8N4P3 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
HDDC3Q8N4P3 PCAT14-202ENST00000627127 3935 ntBASIC4.86□□□□□ -1.63
HDDC3Q8N4P3 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
HDDC3Q8N4P3 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
HDDC3Q8N4P3 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
HDDC3Q8N4P3 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.86□□□□□ -1.63
HDDC3Q8N4P3 AC096656.1-201ENST00000623826 1364 ntBASIC4.86□□□□□ -1.63
HDDC3Q8N4P3 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
HDDC3Q8N4P3 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
HDDC3Q8N4P3 AC068446.1-201ENST00000556425 1549 ntBASIC4.86□□□□□ -1.63
HDDC3Q8N4P3 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
HDDC3Q8N4P3 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
HDDC3Q8N4P3 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
HDDC3Q8N4P3 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.86□□□□□ -1.63
HDDC3Q8N4P3 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
HDDC3Q8N4P3 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.86□□□□□ -1.63
HDDC3Q8N4P3 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
HDDC3Q8N4P3 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
HDDC3Q8N4P3 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.85□□□□□ -1.63
HDDC3Q8N4P3 THAP12P5-201ENST00000405864 2275 ntBASIC4.85□□□□□ -1.63
HDDC3Q8N4P3 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.85□□□□□ -1.63
HDDC3Q8N4P3 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
HDDC3Q8N4P3 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.85□□□□□ -1.63
HDDC3Q8N4P3 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.85□□□□□ -1.63
HDDC3Q8N4P3 AL590240.1-201ENST00000334118 313 ntBASIC4.85□□□□□ -1.63
HDDC3Q8N4P3 SNX10-203ENST00000409367 746 ntTSL 5 BASIC4.85□□□□□ -1.63
HDDC3Q8N4P3 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC4.85□□□□□ -1.63
HDDC3Q8N4P3 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.85□□□□□ -1.63
HDDC3Q8N4P3 AC009965.2-201ENST00000425328 970 ntBASIC4.85□□□□□ -1.63
HDDC3Q8N4P3 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
HDDC3Q8N4P3 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4.85□□□□□ -1.63
HDDC3Q8N4P3 AC016831.4-201ENST00000438302 307 ntBASIC4.85□□□□□ -1.63
HDDC3Q8N4P3 AC239809.1-201ENST00000450470 217 ntBASIC4.85□□□□□ -1.63
HDDC3Q8N4P3 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.85□□□□□ -1.63
HDDC3Q8N4P3 AC069304.1-201ENST00000491593 704 ntBASIC4.85□□□□□ -1.63
HDDC3Q8N4P3 AC104971.1-201ENST00000495117 578 ntBASIC4.85□□□□□ -1.63
HDDC3Q8N4P3 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.85□□□□□ -1.63
HDDC3Q8N4P3 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC4.85□□□□□ -1.63
HDDC3Q8N4P3 RAD21-204ENST00000518055 896 ntTSL 2 BASIC4.85□□□□□ -1.63
HDDC3Q8N4P3 AC134698.5-201ENST00000519444 336 ntBASIC4.85□□□□□ -1.63
HDDC3Q8N4P3 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.85□□□□□ -1.63
HDDC3Q8N4P3 AC068993.1-201ENST00000546724 589 ntBASIC4.85□□□□□ -1.63
HDDC3Q8N4P3 AC006349.1-201ENST00000555526 235 ntBASIC4.85□□□□□ -1.63
HDDC3Q8N4P3 AC116553.2-201ENST00000564203 463 ntBASIC4.85□□□□□ -1.63
HDDC3Q8N4P3 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC4.85□□□□□ -1.63
HDDC3Q8N4P3 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC4.85□□□□□ -1.63
HDDC3Q8N4P3 SNORA74C-1-201ENST00000580726 201 ntBASIC4.85□□□□□ -1.63
HDDC3Q8N4P3 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
HDDC3Q8N4P3 AL121932.1-201ENST00000605542 214 ntBASIC4.85□□□□□ -1.63
HDDC3Q8N4P3 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC4.85□□□□□ -1.63
HDDC3Q8N4P3 AC079298.2-201ENST00000623885 459 ntBASIC4.85□□□□□ -1.63
HDDC3Q8N4P3 AL139254.3-201ENST00000641097 674 ntBASIC4.85□□□□□ -1.63
HDDC3Q8N4P3 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms